Basic Information

Insect: Tuta absoluta
Gene Symbol: -
Assembly: GCA_029230345.1
Location: CM055286.1:7929784-7934376[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.057 5.6 8.7 2.7 2 22 189 209 188 209 0.95

2 15 3.2 3.2e+02 3.2 1.0 1 23 309 331 309 331 0.82

3 15 0.87 85 5.0 0.3 2 23 462 483 461 483 0.95

4 15 0.0053 0.52 11.9 0.0 3 23 555 575 553 575 0.96

5 15 0.4 39 6.0 0.5 1 23 583 605 583 605 0.95

6 15 0.074 7.3 8.3 3.7 1 23 634 656 634 656 0.95

7 15 0.00023 0.022 16.2 4.0 1 23 664 686 664 686 0.99

8 15 0.1 10 7.9 1.9 1 23 773 795 773 795 0.99

9 15 0.019 1.8 10.2 0.2 2 23 879 900 879 900 0.97

10 15 0.07 6.9 8.4 1.7 1 23 966 988 966 988 0.93

11 15 0.0047 0.46 12.1 0.4 1 23 994 1016 994 1016 0.96

12 15 0.0063 0.62 11.7 2.6 1 23 1105 1127 1105 1127 0.97

13 15 0.00016 0.015 16.7 1.4 1 23 1133 1155 1133 1155 0.99

14 15 0.75 73 5.2 2.0 1 23 1245 1267 1245 1267 0.96

15 15 0.0025 0.24 13.0 4.1 1 23 1278 1300 1278 1300 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.057	5.6	8.7	2.7	2	22	189	209	188	209	0.95
2	15	3.2	3.2e+02	3.2	1.0	1	23	309	331	309	331	0.82
3	15	0.87	85	5.0	0.3	2	23	462	483	461	483	0.95
4	15	0.0053	0.52	11.9	0.0	3	23	555	575	553	575	0.96
5	15	0.4	39	6.0	0.5	1	23	583	605	583	605	0.95
6	15	0.074	7.3	8.3	3.7	1	23	634	656	634	656	0.95
7	15	0.00023	0.022	16.2	4.0	1	23	664	686	664	686	0.99
8	15	0.1	10	7.9	1.9	1	23	773	795	773	795	0.99
9	15	0.019	1.8	10.2	0.2	2	23	879	900	879	900	0.97
10	15	0.07	6.9	8.4	1.7	1	23	966	988	966	988	0.93
11	15	0.0047	0.46	12.1	0.4	1	23	994	1016	994	1016	0.96
12	15	0.0063	0.62	11.7	2.6	1	23	1105	1127	1105	1127	0.97
13	15	0.00016	0.015	16.7	1.4	1	23	1133	1155	1133	1155	0.99
14	15	0.75	73	5.2	2.0	1	23	1245	1267	1245	1267	0.96
15	15	0.0025	0.24	13.0	4.1	1	23	1278	1300	1278	1300	0.98

Sequence Information

Coding Sequence: ATGGGTTTACAAAACGCAGATGTAGAATTGATCAGCTGCAATAGCGATTCCAACGACGCCACCGCACCCGACGCCGCTGCCAAGAGAGACGACTCACACTTGGCACTGGACCCACGCAGCCGGCTCTCCCCGCATCACACTGCGGAAGATAACAAATCACAGAAACAAAAGAAACGACCTCCACCGCCTCTCATCCCACTTAACACCTCCACCCCGACGACGCAAAACAAGACTACCGAACCACCAGCCAAGAAACTCAAACAAACCTCAGAGTTCACGGACAACCTCGTTAAAAAATACGAACATTTGCCAGCTGATATTACTTTGATACCAGTAAATGTGCCAAACACTAAAGACACAGCAGGGCATAAGAAAAATATATCGTTTTTCGATAAACTTAAAGCGAGATTGCTAACGGAAACCGGCGAAGATGGATCTCTCACGTGTAAAAATTGTGGATTCGAAAGCAAGTGTTTATCAGAACATTCCGTACATGAGAAGAATTGTTCTGCGCtcgccggccgcgccgccgCAAACACCGCTGTTTCAAGTTCGGGCTCGACGCGATGCCAAAACTGCAGGCACAGGTGCAAGTCTAGTGCTGACTTGATTATTCACATGCAAACATGCATGAAAAACGAAAAAAGTTACGTTGGGGTCCACAAAGATACCAAAAGCGAAGATAGCGAAGATGTTAGTATAGTAAATATTGAAAAGGAAGCAGAGCCTCATCCAATGGAAAATGTCGTTTTTGTTTGGAATAATATTCCAAACCAAGAAGCTAATAAGTTTGAAACACCGCTTGATATCAGCATCAATGACGATTCAACACTTCCTGATTTTCATAAAACCTACGACACTGAAATTATTGACGATAATGATAGCTTGAATTTATCACCTAGTCAGGCTGCTGGGAAGAAAGTTTTCAAATGCCCTCACTGTCCATTTTGGGCTTCGACAGCGTCACGTTTCCATGTTCATATTGTAGGTCATTTGAACAAAAAGCCGTTTGAATGTTCCTTGTGCAAATACAAATCCAACTGGCGATGGGATATCACGAAACACATAAAACTAAAATCTGCAAGAGACCCAGAACATACTAATGCAAAAGTGTTGATGACTGACGAAACAGGAAGGCGGAACTATACTAAGTATAACAAATTTCTGGCAATGCCTATAATGAACGAGAATGGAGAAAATGAATTCCACTACGTGGATCCTGGAACTGACACAAACTTGGATCCGGACGAGCCCTACGGAGACGGCAATGACGGAGCCCAACAAGGGTACGACATGCAACCGCTAAACCTGCAAACACAACCTGGAAATTATGACCACGGCGATGGTGCATTTGATGCTGGAAAACCTAAGAAGACAATGTggaaatgtaaaaaatgcaATTACAGGGATCCATCGAAGGAAGCACTGCTATTGCACGTCCGGGACCATTCAAAAGAAGATGACAAGAACAAGAAAACGGAGAATGTGCCTGATCCTGCCGACTTGGCGTATCGATGTGGCCATTGCAACCAACTATCCAACTGGAAGCACGTCATCCAgAGACACTGCCGACTGAAGCACGATGGAATAATAAAGGTCATAACAACAGTAAAACCCAAACCAGAAAATCCCCCTGCAACGGTCGAACTACCCCCCGATGCGTGCCCTAAGTGTCCGTTCCGGTCGGCTGACCAGGATGCGCTCAACGCACATCTACAACAACACCAGCCGTCGCCTCTGTCCATATTCAAGTGCTACTTCTGCCCATTCTTTGTTAAAGACGAACAAGAACTAGTGCAACATCTTGTCTTACACGGAATAAACGACCCAGAAGAATACATTGCTAAAGCTATGGATGGTAAATGGATAGCTGAAGATGGTTCAGCGAAGACAAAGAGACACAAGTGCACCGAATGCCCTTACGAAACTAACAGCAAATCACAATACCAGTATCACGAGCAGTTCCACCGCCACCCTGCGAACACACCTTACAAATGCcctgaatgtaactacagtgtttCAAAGAGGCATCTTCTTCATCAACATTTGCGAGTCCATGGAATATTCCCAAAAAAGAGCGAAATGGAAGCCGAACTGGAAGCTCTTTCAAATAACCCAGGCTCCAGTTCTAAGCTAGACTTGAAACCAGACTACCCGATACTTGAAGATAGTCCTTACGTATGGGTATCTGCTAAAAATGAATTCCATAAAATGTATAAATGCCGTTACTGCTCTTACGTTAACTCACAAAAATGTAAAATACCAAATCATGAGAAAATTCACTGCATTGTGTTTGATAATActgaaataacaatttataagtGCCTGGAATGTAAATTTACTTGCGACAATGCGGGCAGGCTAGCTGATCACTCGAAAACGCATGCTGAGATATATGGCCGAATATACTGCCCGGTGGAAGAGGACGTACCTGATGATGAGCAAATTGCAAAACTACGTAAAGTGATTGAAAATGAGAGACTAAACACACCTGATGAAAGAGAAGAAGGTTGCCCGGATAACGGCTCCGTAGctgtaaaatacttatttttctgtCACAAATGTCCAGCTAGATTTTTCTGTGACAGTGAACTAAAGATACACGACAAGTTTCATGATCACGCGTTTGATAACAGGTGCACTATATGTGAATTTTCAACGCCCCAAGAAAACGAACTTAATGAACATCAGTTGGTCCACTCAGATGAATATCACACTAAAACGAAAATGCTCAAATTCGTTCACAACACCCACCCTTGCCACAAGGAGCCTGCTATGGAATTCGTTCAGTGTCAAATAACATGTAGCATGAGTTGGAAAGTTTCTCATCCGAGCAAAAACTTCgatgaaactgaaaacaagAAACCAAACGAAGCTAAGCATAATGCGAAACAATATGCATGCAAAGAATGTCCTGCAAAATTCTTTAAATGCTCTGCTTTGAATTACCACACGGGATTGCACGGAGGAGACGGCGAGTTTAAATGCAAGAAGTGCAGCTACGCTGTGAAGAATGTGGGCAATTTAGCTAAACACGAGCTGTTGCACGAGAACGAAGGCAAACCGCTTCGGGAATATGACTCTGGAGACGATATGGATTACAAAAATATACCACTTTCTGGGACTGATCTATTTCAAAGAAAGACTGAAGCTCAAAAACGAGTATTAACGGATAAAGATAAATTAGTGAAACCAAATGATCACTTTCCACCTGTTTTGCAAGCCGATCCTCAATTTGGATACCTAATGCACGGGAATCCTGAATTCATATACCCAACGTATCTCAAGAACGGGCGTCAAAAGGAAAAACGGTACAAATGCCATAAATGTCCTTCTGCTTTCGAGAAAAGAGAACAATATAAGATTCATCTATCACTACACGGGTCCAAACAGAGATACAAATGTGAACTTTGTGACTATTCAGTAAAGTATTATGCAAATTATGTACAACATATGCGGAAACATCAGATGAATGATGAAGCTCAAGCCGAAAGAAAGAAAGGTTCTAGCGATTCTGTGGAAACCGAAAGTCAAGATGACAAAATGGAAGATAGCAGCGAACACATTAAGCTGGCTATAAAAACGATGCCAAAAGGAACTGCTAAAAGTGATTTCCATTCATTTTCGGTTAGCGATCAGCAAACTCTAAGACTATTGCAACGTAGGCGTTCAATGAATGCCACCAAAGACTCTAGCGCATCAGATGTAACTCCCAGCAAAGATAGGAAGTTACACATGTGTTTATTATGCCCTTACACAAATCAACGACAAGACGCGCTCAGCAATCACTACCGAAGGCATGACGATACGGACATTTTAAATACAGGAAATCACAAATGTTCGTACTGCGACCTTGTAGTGGTGCAGTCGCACTTTCTAAGAGAACATCAGAAGACACACTTCAGTTACCAGAAGAACCTTAATCCAGAGTGCTACGTGGCGAACGAAGGCGTCAGTTTTACTATTACGAAAGTGGACGACGAACTCGTGTCCACTGATCTCAAGTTAGATATGAAAGGCAAAATCTACATGTGCAATGAAGATAAGTTATTTGTGAAGGTAACGACAGGAGAAATCTTTGTAGAATAA
Protein Sequence: MGLQNADVELISCNSDSNDATAPDAAAKRDDSHLALDPRSRLSPHHTAEDNKSQKQKKRPPPPLIPLNTSTPTTQNKTTEPPAKKLKQTSEFTDNLVKKYEHLPADITLIPVNVPNTKDTAGHKKNISFFDKLKARLLTETGEDGSLTCKNCGFESKCLSEHSVHEKNCSALAGRAAANTAVSSSGSTRCQNCRHRCKSSADLIIHMQTCMKNEKSYVGVHKDTKSEDSEDVSIVNIEKEAEPHPMENVVFVWNNIPNQEANKFETPLDISINDDSTLPDFHKTYDTEIIDDNDSLNLSPSQAAGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHTNAKVLMTDETGRRNYTKYNKFLAMPIMNENGENEFHYVDPGTDTNLDPDEPYGDGNDGAQQGYDMQPLNLQTQPGNYDHGDGAFDAGKPKKTMWKCKKCNYRDPSKEALLLHVRDHSKEDDKNKKTENVPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPENPPATVELPPDACPKCPFRSADQDALNAHLQQHQPSPLSIFKCYFCPFFVKDEQELVQHLVLHGINDPEEYIAKAMDGKWIAEDGSAKTKRHKCTECPYETNSKSQYQYHEQFHRHPANTPYKCPECNYSVSKRHLLHQHLRVHGIFPKKSEMEAELEALSNNPGSSSKLDLKPDYPILEDSPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFDNTEITIYKCLECKFTCDNAGRLADHSKTHAEIYGRIYCPVEEDVPDDEQIAKLRKVIENERLNTPDEREEGCPDNGSVAVKYLFFCHKCPARFFCDSELKIHDKFHDHAFDNRCTICEFSTPQENELNEHQLVHSDEYHTKTKMLKFVHNTHPCHKEPAMEFVQCQITCSMSWKVSHPSKNFDETENKKPNEAKHNAKQYACKECPAKFFKCSALNYHTGLHGGDGEFKCKKCSYAVKNVGNLAKHELLHENEGKPLREYDSGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSSDSVETESQDDKMEDSSEHIKLAIKTMPKGTAKSDFHSFSVSDQQTLRLLQRRRSMNATKDSSASDVTPSKDRKLHMCLLCPYTNQRQDALSNHYRRHDDTDILNTGNHKCSYCDLVVVQSHFLREHQKTHFSYQKNLNPECYVANEGVSFTITKVDDELVSTDLKLDMKGKIYMCNEDKLFVKVTTGEIFVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00844947; iTF_00275793; iTF_01403936;
90% Identity: iTF_00844947;
80% Identity: -