Basic Information

Insect: Keiferia lycopersicella
Gene Symbol: -
Assembly: GCA_029255805.1
Location: JARACZ010000017.1:6057904-6064724[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.1 92 4.7 5.9 1 23 49 72 49 72 0.96

2 20 0.081 6.8 8.3 6.0 1 23 79 101 79 101 0.98

3 20 8.3 6.9e+02 1.9 4.7 1 23 176 198 176 198 0.96

4 20 0.24 20 6.8 1.1 2 23 204 225 203 225 0.96

5 20 8.2 6.8e+02 2.0 3.1 1 23 231 253 231 254 0.94

6 20 0.074 6.2 8.4 2.7 2 22 495 515 494 515 0.95

7 20 4.2 3.5e+02 2.9 1.0 1 23 614 636 614 636 0.82

8 20 0.82 68 5.1 0.3 2 23 767 788 766 788 0.96

9 20 0.0069 0.57 11.6 0.0 3 23 860 880 858 880 0.96

10 20 0.52 43 5.7 0.5 1 23 888 910 888 910 0.95

11 20 0.097 8 8.0 3.7 1 23 939 961 939 961 0.95

12 20 0.00029 0.024 15.9 4.0 1 23 969 991 969 991 0.99

13 20 0.13 11 7.6 1.9 1 23 1078 1100 1078 1100 0.99

14 20 0.031 2.6 9.6 0.4 2 23 1184 1205 1184 1205 0.97

15 20 0.091 7.6 8.1 1.7 1 23 1271 1293 1271 1293 0.93

16 20 0.0061 0.5 11.8 0.4 1 23 1299 1321 1299 1321 0.96

17 20 0.0082 0.68 11.4 2.6 1 23 1410 1432 1410 1432 0.97

18 20 0.00021 0.017 16.4 1.4 1 23 1438 1460 1438 1460 0.99

19 20 0.97 81 4.9 2.0 1 23 1550 1572 1550 1572 0.96

20 20 0.0032 0.27 12.7 4.1 1 23 1583 1605 1583 1605 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.1	92	4.7	5.9	1	23	49	72	49	72	0.96
2	20	0.081	6.8	8.3	6.0	1	23	79	101	79	101	0.98
3	20	8.3	6.9e+02	1.9	4.7	1	23	176	198	176	198	0.96
4	20	0.24	20	6.8	1.1	2	23	204	225	203	225	0.96
5	20	8.2	6.8e+02	2.0	3.1	1	23	231	253	231	254	0.94
6	20	0.074	6.2	8.4	2.7	2	22	495	515	494	515	0.95
7	20	4.2	3.5e+02	2.9	1.0	1	23	614	636	614	636	0.82
8	20	0.82	68	5.1	0.3	2	23	767	788	766	788	0.96
9	20	0.0069	0.57	11.6	0.0	3	23	860	880	858	880	0.96
10	20	0.52	43	5.7	0.5	1	23	888	910	888	910	0.95
11	20	0.097	8	8.0	3.7	1	23	939	961	939	961	0.95
12	20	0.00029	0.024	15.9	4.0	1	23	969	991	969	991	0.99
13	20	0.13	11	7.6	1.9	1	23	1078	1100	1078	1100	0.99
14	20	0.031	2.6	9.6	0.4	2	23	1184	1205	1184	1205	0.97
15	20	0.091	7.6	8.1	1.7	1	23	1271	1293	1271	1293	0.93
16	20	0.0061	0.5	11.8	0.4	1	23	1299	1321	1299	1321	0.96
17	20	0.0082	0.68	11.4	2.6	1	23	1410	1432	1410	1432	0.97
18	20	0.00021	0.017	16.4	1.4	1	23	1438	1460	1438	1460	0.99
19	20	0.97	81	4.9	2.0	1	23	1550	1572	1550	1572	0.96
20	20	0.0032	0.27	12.7	4.1	1	23	1583	1605	1583	1605	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCTGTCGAGCGCACTAGCCGGCGAGGTCGGAACTCTTGTGCGCCCCTTCGAAGGCCGCCTGAGCGGTGCCATCTTCGCGGACCAGGCGCAGCAAACAGCGCCTCCCAAAAAGTCAAGAAGGAACTACAGTTGTACGAAGTGCAAGTTTCACACGCGGAGTTCACGAGACTTTCTTCATCATGCCCGTGAAGTGCATTTTGAAAAACTGAAAATTCATGAGTGTCCTCATTGTGCTTACGCGTGTAGATTTTATCAAAAGTTATTACGCCATATGAAAGTTCACACGACTTCATCATCATCGGATAATTGTGTAAACACGATGGAGCCGGAAATAAATGAAGAGTCCGTAGACATGGACGACTTCCTTGAAGAGGTGGAAGATGGCAATGACGAAGAGATGGATATTGAAGAATGTACAGAGGAATCGATGGAGGAGTTAGTTGACAACGGCGACAGAGCAGGAGAAGCGTCTGTCTCAAACTCTACGAAAAACAATGGCAAATATTTCTCTTGCACAAAGTGCAATTACGTGACACATATTAGAGGCAGATTCACGAAGCACGTGAAATACCACTCGATGCCGATGATAAAATGTACCATGTGTGAATTTCGTACGCCATACAAATGGAATTTGGATCGGCACAATAAGAACCACGGCGGCACTGGTAGCTTCCACTGCTCTATGTGCAACTTCACAGCAGACATCAAGCAGAGTCTGACGGTGCACGAAATGAatcatcacacggcagttgCGGGCCAATCGGGCGTGAGTCGTCGCCGCAACCGGGTGGGCGCCAGTGACTGCGCTCTCGTCGAGGCgaacgccgccgccgctgccgcgcTCGTCCCCAAGGAGGAGGAAGGGAGCGGAGACTCGCGTTCCTCGCACGCTGCCTCGGATATGGGTTTACAAAACGCAGATGTAGAATTGATCAGCTGCAATAGCGATTCCAACGACGCCACTGCACCCGACACCGCTGCCAAGAGAGACGACTCACATTTGGCACTGGAGCCACGCAGCCGGCTCTCCCCGCCGCACACTGCGGAAGATAACAAATCACAGAAACAGAAGAAACGACCCCCACCGCCTCTCATCCCGCTCAGCACCTCCACTCCGACTCAAAACAAGACTATCGAACCACCTGCAAAGAAACTCAAACAAACTTCAGAGTTCCCGGAGAACCTCGCAAAGAAATACGAACATTTGCCAGCCGATATTACTCTGATACCTGTAAACGTGCCAAACACTAAAGAAACAGCTGGACAtaagaaaaatataacatttttcgACAAACTGAAAGCGAGATTGTTAACGGAAACTGGCGAAGATGGATCTCTCACATGTAAAAACTGTGGATTCGAAAGTAAATGTTTGTCAGAACATTCCGTTCATGAGAAGAATTGTTCAGCGCTCGCCGGCCGTGCCGCCGCAAACACCGCAGTCCCGAGTTCGGGCTCGACGCGATGCCAAAACTGCAGGCACAGGTGCAAGTCTAGCGCTGACTTGATAATTCACATGCAAACGTGCATGAGAAACGATAAAACTAACGTCGGTGTCTACAACGATACCAAAAGCGAAGAAGAAGATGTGACAATAGTCAATATTGAAAAAGAAGCAGAGCCTCATCCAATGGAAAATGTCGTTTTCGTTTGGAATAATATTCCAAACCAAGAAGGTAACAAGTTTGAGACTCCGCTTGATATAAGCATAAATGACGATTCAACACTCCCAGATTTTCATAAAACCTATGATACTGAAATAATTGACGATAACGATAGCATGAATTTATCACCAAGTCAGGCTGCCGGGAAGAAAGTTTTCAAATGTCCGCACTGTCCATTTTGGGCGTCGACTGCTTCTCGTTTCCATGTTCATATTGTAGGCCATTTGAACAAAAAGCCATTTGAGTGTTCCTTATGCAAATACAAGTCTAACTGGCGATGGGACATCACGAAAcacataaaactaaaatctgCTAGAGACCCAGAACATAATAATGCTAAAGTATTGATGACTGACGAAACAGGGAGGCGGAACTACAGCAAATATAACAAGTTTTTGGCAATGCCTGTCATGAATGAGAACGGCGAAAACGAATTCCACTACGTGGACCCTGGAACTGACACAAACTTGGATCCGGACGAGCCGTACGGAGACGGTAATGACGGAGCCCAGCAAGGGTATGACATGCAACCACTTAATCTGCAAACGCAACCCGGGAATTACGACCACAGCGATGGTGCATTTGATGCTGGAAAACCAAAGAAAACAATGTGGAAATGTAAAAAATGCAATTACAGGGATCCATCGAAGGAAGCACTGCTATTGCACGTTCGGGAGCATTCTAAAGAGGATGACAAGAACAAGAAAGCAGAGAACTTGCCTGATCCTGCCGATTTGGCGTATCGATGTGGTCATTGCAACCAACTGTCTAATTGGAAGCATGTCATTCAGAGACACTGCCGATTGAAGCACGATGGAATAATAAAGGTCATAACCACATTGAAACCTAGACCGGAAAATCCCCCAGCGCCCGTCGAGCTACCCCCGGATGCGTGCCCTAAGTGTCCGTTCCGATCAGCTGACCAGGACGCACTCAACGCACACCTACAACAACACCAGCCGTCGCCGCTGTCCATATTTAAGTGCTACTTCTGCCCATTCTTCGTCAAAGACGAGCAAGAACTTGTACAACATCTTGTCTTACACGGCATAAACGATCCAGAAGAATACATCGCTAAAGCTATGGATGGAAAGTGGATAGCTGAAGATGGCTCGGCAAAGACAAAGAGACACAAGTGTACTGAATGCCCGTACGAAACTAACAGCAAATCACAATACCAGTACCATGAGCAGTTCCATCGCCACCCTGCAAACACACCGTACAAATGCCCTGAATGCAACTACAGTGTCTCAAAGCGGCATCTTCTGCATCAGCATTTGAGAGTCCATGGAATATTCCCTAAAAAGAGCGAAATGGAAGCCGAATTAGAAGCTCTTTCAAACACCCCTGGCTCCAGTTCCAAACCAGACCTAAAGCAAGAATACCCGATACTTGACGAGAGCCCTTACGTTTGGGTATCTGCTAAAAATGAATTCCATAAAATGTACAAATGCCGTTACTGCTCTTATGTTAACTCACAGAAATGCAAAATTCCAAATCATGAAAAAATTCACTGCATTGTGTTTGATAATACTGAAATAACAATTTACAAATGCTTGGAATGTAAGTTTACCTGCGATAATGCTGGAAGGTTAGCTGATCACTCTAAAACACATGCTGAGATATACGGTCGGATATACTGCCCGGTGGAAGAGGATGTGCCTGATGAGGAGCAAATTGCTAAATTACGTAAAGTGATTGAAAACGAGAGACTAAACACACCCGATGAAAGAGAAGAAGGTGGTCCGGATAACGGGTCCGTAGCTGTAAAATACTTATATTTCTGTCACAAGTGCCCAGCAAGATTTTTCTGTGACAGTGAGCTAAAGATACACGACAAGTTCCATGATCACGCATTTGATAACAGGTGCCATATATGTGAATTTTCAACACCGCAAGAAATCGAACTCAATGAGCACCAATTGGTCCACTCAGATGAATATCATACTAAAACGAAAATGCTTAAATTCGTTCACAATACCCACCCCTGCCACAAGGAGCCTGCTATGGAATTTGCTCAATGTCAAATAACATCTACCATCACTTGGAGAGTTTCTCAGCCGAGCAAAAACTTCGATGAAGCTGAAAACAAGAAACCGAATGAAACAAAGCACAATGCAAAACAATATGCTTGCAAAGAATGTCCTGCTAAATTTTTCAAATGTTCTGCTTTGAATTACCACACGGGATTGCATGGAGGCGACGGAGAGTTTAAATGTAAGAAGTGTAGCTATGCCGTGAAGAATGTGGGTAACCTAGCTAAACACGAGCTGTTGCACGAAAACGAAGGCAAACCTCCTCGGGAATACGACTCTGGTGACGATATGGATTACAAAAATATACCACTTTCTGGGACTGATCTATTTCAAAGAAAGACTGAAGCTCAGAAACGAGTGTTAACTGATAAAGATAAGTTAGTAAAACCAAATGATCACTTTCCACCTGTTTTACAAGCTGATCCCCAATTTGGATACCTTATGCATGGCAATCCTGAATTTATATACCCAACTTATCTCAAAAATGGGCGTCAAAAGGAAAAACGGTACAAATGCCATAAATGTCCTTCTGCTTTCGAGAAAAGAGAACAATATAAGATTCATTTATCATTACATGGCTCCAAACAGAGATACAAATGCGAACTTTGTGATtattcagtaaaatattatGCAAATTATGTACAGCACATGCGAAAGCATCAAATGAATGATGAAGCTCAAGCCGAAAGGAAGAAAGGTTCCAGCGAATCTGTGGAAACCGAAAGTCAAGATGACAAAATGGAAGATAGCAGCGAACCCATTAAGCTGGCTATCAAAACCATGCCAAAAGGAACTGCTAAAAGTGATTTCCATTCATTTTCGGTTAGCGATCAGCAAACTCTAAGACTATTGCAACGTAGGCGTTCAATGAATGCCACCAAAGACTCTAGCGCATCAGATGTAACTCCCAGCAAAGATAGGAAGTTACACATGTGTTTATTATGCCCTTACACTAATCAACGCCAAGACGCGCTCAGCAATCACTACCGAAGACATGACGACACTGACGTGTTAAATACAGGAAATCACAAGTGTTCGTACTGCGACCTTGTAGTGGTGCAATCGCACTTCCTTAGAGAACACCAGAAGACACACTTCAGTTACCAGAAGAACCTTAATCCAGAGTGTTTTGTGGCCAACGAAGGCGTCAGTTTTACTATAACGAAAGTGGACGACGAACTCGTATCCACTGATCTCAAGTtagatatgaaaaacaaaatgtacatgTGCAATgaagataaaatatttgttaaggtAACAACAGGGGAACTCTTAGTAGAATAA
Protein Sequence: MLQQMSSLSSALAGEVGTLVRPFEGRLSGAIFADQAQQTAPPKKSRRNYSCTKCKFHTRSSRDFLHHAREVHFEKLKIHECPHCAYACRFYQKLLRHMKVHTTSSSSDNCVNTMEPEINEESVDMDDFLEEVEDGNDEEMDIEECTEESMEELVDNGDRAGEASVSNSTKNNGKYFSCTKCNYVTHIRGRFTKHVKYHSMPMIKCTMCEFRTPYKWNLDRHNKNHGGTGSFHCSMCNFTADIKQSLTVHEMNHHTAVAGQSGVSRRRNRVGASDCALVEANAAAAAALVPKEEEGSGDSRSSHAASDMGLQNADVELISCNSDSNDATAPDTAAKRDDSHLALEPRSRLSPPHTAEDNKSQKQKKRPPPPLIPLSTSTPTQNKTIEPPAKKLKQTSEFPENLAKKYEHLPADITLIPVNVPNTKETAGHKKNITFFDKLKARLLTETGEDGSLTCKNCGFESKCLSEHSVHEKNCSALAGRAAANTAVPSSGSTRCQNCRHRCKSSADLIIHMQTCMRNDKTNVGVYNDTKSEEEDVTIVNIEKEAEPHPMENVVFVWNNIPNQEGNKFETPLDISINDDSTLPDFHKTYDTEIIDDNDSMNLSPSQAAGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNNAKVLMTDETGRRNYSKYNKFLAMPVMNENGENEFHYVDPGTDTNLDPDEPYGDGNDGAQQGYDMQPLNLQTQPGNYDHSDGAFDAGKPKKTMWKCKKCNYRDPSKEALLLHVREHSKEDDKNKKAENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTLKPRPENPPAPVELPPDACPKCPFRSADQDALNAHLQQHQPSPLSIFKCYFCPFFVKDEQELVQHLVLHGINDPEEYIAKAMDGKWIAEDGSAKTKRHKCTECPYETNSKSQYQYHEQFHRHPANTPYKCPECNYSVSKRHLLHQHLRVHGIFPKKSEMEAELEALSNTPGSSSKPDLKQEYPILDESPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFDNTEITIYKCLECKFTCDNAGRLADHSKTHAEIYGRIYCPVEEDVPDEEQIAKLRKVIENERLNTPDEREEGGPDNGSVAVKYLYFCHKCPARFFCDSELKIHDKFHDHAFDNRCHICEFSTPQEIELNEHQLVHSDEYHTKTKMLKFVHNTHPCHKEPAMEFAQCQITSTITWRVSQPSKNFDEAENKKPNETKHNAKQYACKECPAKFFKCSALNYHTGLHGGDGEFKCKKCSYAVKNVGNLAKHELLHENEGKPPREYDSGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSSESVETESQDDKMEDSSEPIKLAIKTMPKGTAKSDFHSFSVSDQQTLRLLQRRRSMNATKDSSASDVTPSKDRKLHMCLLCPYTNQRQDALSNHYRRHDDTDVLNTGNHKCSYCDLVVVQSHFLREHQKTHFSYQKNLNPECFVANEGVSFTITKVDDELVSTDLKLDMKNKMYMCNEDKIFVKVTTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01501667;
90% Identity: iTF_01501667;
80% Identity: -