Basic Information

Insect: Tuta absoluta
Gene Symbol: Hr39
Assembly: GCA_029230345.1
Location: CM055283.1:18132851-18154519[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.11 1.4e+03 -0.5 3.1 87 163 234 310 132 343 0.56

2 3 4.2e-07 0.0054 17.3 0.1 1 20 444 463 444 468 0.91

3 3 8.7e-66 1.1e-61 210.6 0.0 164 408 506 762 474 762 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.11	1.4e+03	-0.5	3.1	87	163	234	310	132	343	0.56
2	3	4.2e-07	0.0054	17.3	0.1	1	20	444	463	444	468	0.91
3	3	8.7e-66	1.1e-61	210.6	0.0	164	408	506	762	474	762	0.84

Sequence Information

Coding Sequence: ATGAGTGCGATGACTAGTGAGGGGGAGCCTGTCAAAGTGGAGGGGGGTCACGTATCGGTGACCACCATCAGCATGTCGGGCCCAGAGACCAGTAATGGCCAGTTCTCCTACAGCTCTAGTGGGGTCCGCATCAGTGTCTCATCAGAGCCTCACGATGAAGATTCTACAGACGCTGAAATCTCCAAAATCGACTTCTCCCAGCATCAGTATGAGGTGAACATGCGTAATAAAAAGAAGCGGTCTTCCAGCGGTGTACCCTGCGAGCCCACCAATGTTGAACGcgagaggcccatgtcctggGAGGGGGAACTCTCAGACTCCGAAATGGTCATCGACACGAGTGTTAACAATGATGAAAACAGCAACTCCCTAGACCTACAATCGTCACGGGACTCCATCGACACGCTTCGGAACGTGACCATCAAAACTGAACCAGTGAAGAGCGAACCCTTTCAGAGCCTGGACGACCAGAGGGTTCTGGATCTGAAGTATGCTGCGCCGCTGCAGCCTCATCAGAGGAGTCTCAGCATGAACAGGATATCCGTACTAACCGACAATTCGTCGCTCGCGCTGTCCCGTCGACCGTCATCGCCGACAAATAGTGCGAAGTCGCTGGTATTAGACCAGAATACAGTGCCAATGATGACATCAGCAGCTGGGGAGATACAGAACTTGACCATCAAGAAGGAAACGCAATTATCAGAACTGAAGTGCGAGCCATCAGTGGGCATGGACAAGTTGCTGGGCGCGCTGCACGGCTCCCCACTGCTGGGCAGGTTGCCGCGCGTGCAGTCCAGCGCGAGCACCGACTCCGCAGTACATTCCATGTATACGCACAGcGTATACAGCAGTCCGTCGGCCAGTCCGCGGGCATCGAGACATTATACTCCGTCCCTTTCCCGCAACAACAGCGACGCATCGCACTCATCGTGTTACTCTTACAGTTCAGAGTTCTCTCCGACACATTCCCCAGTACAAGGCCGGCATCCACACTTAGTATATCGCGAGGCGACAGCCGGTGCTGTATTCCCAGCGTCACCAGCTCACGATGAAGACGTAGAAGGCGAAGATAGACTGCATCATCACCAGGGTATCAGCAGACAACAGCTCATTAACAgTCCCTGCCCAATATGCGGCGACAAAATCTCCGGTTTCCACTACGGCATATTCTCCTGCGAATCCTGCAAGGGTTTCTTCAAACGCACCGTTCAGAACAGAAAGAACTACATGTGTCTTAGAGGAGGGAACTGCCCTGTCACAGTCGCCACCAGGAAGAAGTGTCCGGCTTGTCGGTTTGACAAGTGTTTGGGTTGCGGGATGAAACTGGAAGcCATCAGAGAGGACCGTACAAGAGGAGGCCGATCTACATATCACTGTTCGTATTCACTATCCGGAGCCGCTTCTACTGGGTCTTTACTGCAACCGCACGCGCCCTCTACATTACGGCACGCGTCGAGTCTTACTTGTgtaaATGGACCAGGGTCATATAACAGCAGAGGAGAGTCCAGCAACAGCCGACTTACACCTGATATTCCGCCGTTATTACAAGAAATAATGGACGTGGAACATCTATGGCAATACAACGAGTCGGAGCTGAACAAACTCGGCAGGACTCCTGGGAGCCCTTCAGCCAACCCGCTTCTGGCAGCCAGTGGCATCACGGCACAGAACTCCAGCCCGGACTTCTTGGCTGATCTGTGCAACATAGCCGACCACAGGCTGTATAAGATCGTCAAATGGTGCAAGAGTCTGCCGCTGTTTAAGAATATTTCGATCGACGACCAGATCTGTCTGCTCATCAACAGCTGGTGCGAACTCCTGGTGCTCTCCTGTTGTTATCGAGGAGTCAGCACTCCGGGGGAAGTGAGGGTCGGAGGGGGGAGAGGAATCACTCTACATCAAGCTGCCAAGCTGGGTCTTACGCAGTGCATCGAAAGGATGCTGAGTTTCACCGACCACCTGCGACGGTTACGAGTCGACCGATACGAATATGTCGCGCTCAAAGTCATCGTGTTACTCACTTCAGATGCGCCAGAACTTCGCGAAGCGGAAAAAGTGCGAGCATCACAAGAGAAGGCGCTCGCCGCGCTCCAAGCGTACACAGCCGCCCACTCGCCAGACACACCCGCCAAGTTTGGCGAGTTGTTGTTGCGTATTCCGGAGCTGCAGCGCACTTGCCAATTCTTCATGCAAGTGGGCAAGGAGATGCTGAATCCAGCCAACAAAGGAAAAGACGGGGAAGGACCCAGCTTTAACCTACTTATGGAACTTTTACGCGGAGACCATTGA
Protein Sequence: MSAMTSEGEPVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSEPHDEDSTDAEISKIDFSQHQYEVNMRNKKKRSSSGVPCEPTNVERERPMSWEGELSDSEMVIDTSVNNDENSNSLDLQSSRDSIDTLRNVTIKTEPVKSEPFQSLDDQRVLDLKYAAPLQPHQRSLSMNRISVLTDNSSLALSRRPSSPTNSAKSLVLDQNTVPMMTSAAGEIQNLTIKKETQLSELKCEPSVGMDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHLVYREATAGAVFPASPAHDEDVEGEDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYHCSYSLSGAASTGSLLQPHAPSTLRHASSLTCVNGPGSYNSRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELNKLGRTPGSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQAAKLGLTQCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00042698;
90% Identity: iTF_00806824;
80% Identity: iTF_01501252;