Tabs023764.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- dsx
- Assembly
- GCA_029230345.1
- Location
- CM055299.1:12997584-12998207[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.046 4.4e+02 1.9 1.0 4 10 17 23 14 31 0.80 2 2 3.6e-24 3.5e-20 72.7 11.8 2 47 72 117 71 117 0.97
Sequence Information
- Coding Sequence
- ATGCACCGGGCACGTGCGGGGGGAGGGTCGAGGCGGGGGGCGGCAGTGCGCTGCCGGCGGTgcaggcaggcagtcgcatCTAGACGCCGCGCGCGCCGTGTCGCGCCCCGCGAGCTGACTGAGTACGCGATGGTGTCGGTAGGCGCGTGGAGACGCCGCGAGTGCGAGGAGCGCTCCGACCCCGGCGCGTCCAGCTCGGGCGTCCCGCGCGCGCCTCCCAACTGCGCCCGCTGCCGCAACCACCGCCTCAAAGTCGAACTGAAGGGCCACAAGCGCTATTGCAAGTACCGGTACTGCACGTGCGAGAAGTGCCGGCTGACGGCCGACCGGCAGCGGGTGATGGCGCTGCAGACGGCGCTGAGGCGAGCCCAGGCCCAAGACGAGGCCAGGCAGAGGTCCGGTATGCATCAGACGGGGATCGAGCTAGAGCGGCCGGAACCGCCGGTGGTGAAGGCGCCGCGTAGTCCTGTGATTCCTCCTCCTCCGCCCAGGAGTATGGGCTCGGCCAGCTGCGACTCCATCCCGGGCTCGCCGCCGGGCTACGGGCCTCCGCCACCGTCCGCTCCGCCGTCCGCACCGCCGCCTCCGATTGTTCCCGCTCAGATGCCACAACAGCCAGGTTAG
- Protein Sequence
- MHRARAGGGSRRGAAVRCRRCRQAVASRRRARRVAPRELTEYAMVSVGAWRRRECEERSDPGASSSGVPRAPPNCARCRNHRLKVELKGHKRYCKYRYCTCEKCRLTADRQRVMALQTALRRAQAQDEARQRSGMHQTGIELERPEPPVVKAPRSPVIPPPPPRSMGSASCDSIPGSPPGYGPPPPSAPPSAPPPPIVPAQMPQQPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -