Tabs030000.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- SNAPC4_1
- Assembly
- GCA_029230345.1
- Location
- CM055305.1:9205620-9207998[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.8 6.7e+03 -1.6 0.0 22 35 224 238 222 246 0.78 2 5 3.9e-10 6.9e-07 30.4 0.2 1 45 255 301 255 302 0.96 3 5 5.2e-08 9.1e-05 23.6 0.2 2 44 309 355 308 357 0.93 4 5 4e-12 7e-09 36.7 0.0 1 43 361 403 361 405 0.97 5 5 0.00092 1.6 10.0 0.0 3 45 414 460 412 461 0.92
Sequence Information
- Coding Sequence
- ATGAGTGATTCTGAGGAGTATACCGATGCTGATGCCAGCTCCACCGATGAAGAAGCTCAAGAAGAAGACCTGCGGAAGCTAAGCCAAGCAATAGAACCAGATTTACTGGGCAGCTGCAGCAACGCAAGTACTTCTGCAGACAATGATGAGGCTAAGATAGTGAGAGCTTTAGAATTGAACAAAAAGATGGatgataaattaattgaactggAAAAAGCGCTACACGTTCGTTTCAAAGAATGCCGAGAGCGACTCGCAGACTTCCATAAAAAATCCTTGAACCAacaaaatactgaaaaaaaagAACAGGTTTTCCGATATGTTTTCTGTGGGAAGCCGTATTTCAGAGACAAGGACAATTGTCCAGCACCTGACAATGAAGATACCATCACAATGAAAGAGTCAGGAATGTATGATTATTCAAACATAGCATGCTTAGCCGGATGGACAGTAAAAGACAAACAAGACTTACTCACAGAGATTTTGAAGATGTCTCGAAAAATTAGAAAGACAGAACTTGAATCAAAACTTAAAGAGTTAATAAGAAAATCTAAAAAGGAGGACAGTAAAAGTTTACACAAAGAAATTGTTgaaatgaaaaaacaaattaacaatGTAAGTAAATCTGCACTAGACAAAGATATAGTTTTACCTTTGGATGATGAGTATGACTGGGAAGCAATAGCTATGGCACTCAAACTTAGGCATACACCTGATGAATATCGCTCTATAtggaaattatttttacatcctgcaattaataaacaaaattggAATAAAACAGAACATACAAGATTACGTCAAATTGCACTGAAATACGAATTACAAGATTGGGATAAAATTGCTACCGAATTAGGTACTGGACGCTCTGGTTACCAATGTTTTGTTTACTATCGCACTAATATGGGAGGTCATTCAGCGGGCCAGAAATGGTCAAAAGAAGAACAAGAATACCTTCGAAGACTCATTGATTACTACAAAGAAGATAATTACATACCATGGGGTAAAGTCTCTTCTTCAATGGAGAACAGaacaaaaattcaaatatacaataaatttgCAAGGCTTATGGAATTCAGAAAAGGTAGATTCCTCCCAGAAGAAGATACTGTAATCCTAACAGGTGTTAGTAAATTTGGTCccaatttcaaacaaattgcGAAATATGTTCCTGGACGTTCTCCAGCACAGTTACGTGCACGGTACCATGTACTGAATTCTACTACACAAACATCAGTAGTTTGGACATGCAAAGAAGACGAGAAACTCATTCAACTTATGGCCAATCAAGATTCATCTCTATACATTAATTATGCAAACCTCACGCCACACTTTCCTGATAAAGATAGAAATCAATTAAGAGCCAGGTATGTAACATTGATCAAATGGATGAAGAAACATCCAACAAGGGATATTTCCAGAGCACCTCGGAGAGGAGCACGGCGCCTGACACACGGCAAAGTGGAAGAAGATATGTCGTTGGCAGttgaaaaattaaagaaaagaaTCAAATGTGAAATAGACACCAAGAAATCTAGAAAGATAACAAAAACGTCACCAGAAGAAATGATTGAGCATGGCATCATTGCAGCTCTAATCACTGAAAATGTAAGGGAGGAAGAGTTAAGTCCAACAGTACCTGACCAAGACCTCGCAGATGCAGATATGCAATTGCCTatgaatacaaaaataaacgaaacaaaccttaaaaaattattaatattgctcaaagccaaaataaaaaaacaatcttTTGAAACAAGTTTGTATGCCACAAAATATCCCAATATAAAGCATCCAGATTCAGAGTCGTTTACGGTTAAAGTGAAGTCATACTCAAGGAAGGCTGCAACAAATGTCATCACAGTAGGAACACAGATTCATCCACCAGACATTTGGGGTGGCAATAGATTGACTACAAGTAACTATGTGCTGCCACCAAACTATTCCACAATCACTGGGTGCCGTAAAATAATGGCATTTGCAAGTGACAAAACACTGCCCAGCAGCAAGTCATCAAGTTTGCATCAATACATAAAACGGAATGTTTTAGTTAAAGAGCAAGTTACACTTTTTATGGACAGGTTCAACACATTGTTCTTGTGGCCTATGTTATTGTCAAACGAACCTCCAAAAGCAGAAAGTGAATTCAAACCTGTTACGTTGCATCGTGAGGAGCATGTAAAGCGGAGAGAGCACATGAGTGTACCTATTGGGTACAATTTGGTACTACCAGACAGAATTAACAGTTTAGTAAATGAAAGAATTGATTTACCTTCTACGTCTACAGCGTCAACCACTGTGAAACCCAATATAGGCAATGATGATTTTATGTAtattgataatgatgatgaagataTTGATTCTGATGATGATTGA
- Protein Sequence
- MSDSEEYTDADASSTDEEAQEEDLRKLSQAIEPDLLGSCSNASTSADNDEAKIVRALELNKKMDDKLIELEKALHVRFKECRERLADFHKKSLNQQNTEKKEQVFRYVFCGKPYFRDKDNCPAPDNEDTITMKESGMYDYSNIACLAGWTVKDKQDLLTEILKMSRKIRKTELESKLKELIRKSKKEDSKSLHKEIVEMKKQINNVSKSALDKDIVLPLDDEYDWEAIAMALKLRHTPDEYRSIWKLFLHPAINKQNWNKTEHTRLRQIALKYELQDWDKIATELGTGRSGYQCFVYYRTNMGGHSAGQKWSKEEQEYLRRLIDYYKEDNYIPWGKVSSSMENRTKIQIYNKFARLMEFRKGRFLPEEDTVILTGVSKFGPNFKQIAKYVPGRSPAQLRARYHVLNSTTQTSVVWTCKEDEKLIQLMANQDSSLYINYANLTPHFPDKDRNQLRARYVTLIKWMKKHPTRDISRAPRRGARRLTHGKVEEDMSLAVEKLKKRIKCEIDTKKSRKITKTSPEEMIEHGIIAALITENVREEELSPTVPDQDLADADMQLPMNTKINETNLKKLLILLKAKIKKQSFETSLYATKYPNIKHPDSESFTVKVKSYSRKAATNVITVGTQIHPPDIWGGNRLTTSNYVLPPNYSTITGCRKIMAFASDKTLPSSKSSSLHQYIKRNVLVKEQVTLFMDRFNTLFLWPMLLSNEPPKAESEFKPVTLHREEHVKRREHMSVPIGYNLVLPDRINSLVNERIDLPSTSTASTTVKPNIGNDDFMYIDNDDEDIDSDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00844294;
- 90% Identity
- -
- 80% Identity
- -