Basic Information

Insect: Keiferia lycopersicella
Gene Symbol: SNAPC4
Assembly: GCA_029255805.1
Location: JARACZ010000028.1:4037331-4039802[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2.6 4.2e+03 -1.1 0.0 22 37 223 239 219 246 0.82

2 5 1.6e-10 2.5e-07 31.6 0.1 1 45 254 300 254 301 0.95

3 5 1.6e-07 0.00027 21.9 0.4 2 45 308 355 307 356 0.93

4 5 1.2e-11 2e-08 35.1 0.0 1 43 360 402 360 404 0.97

5 5 3.6e-06 0.0059 17.6 0.0 3 45 413 459 411 460 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2.6	4.2e+03	-1.1	0.0	22	37	223	239	219	246	0.82
2	5	1.6e-10	2.5e-07	31.6	0.1	1	45	254	300	254	301	0.95
3	5	1.6e-07	0.00027	21.9	0.4	2	45	308	355	307	356	0.93
4	5	1.2e-11	2e-08	35.1	0.0	1	43	360	402	360	404	0.97
5	5	3.6e-06	0.0059	17.6	0.0	3	45	413	459	411	460	0.93

Sequence Information

Coding Sequence: ATGAGTGATTCAGAGTATACCGATGTTGATGGTAGCTCCACCGATGAAGAAGCTCGAGAAGAAGACCTGAGGAAGCTAAGCCAAGCTATTGAACCTGATGTACTGGCCAGCTGCAGTACCGAACCTAGTTCTACAGCCAATGATTTAAATACTGCTTACAAAGCCATGGAGCTGAACAAAAACTTGGATACGAAATATCACGACCTTTACAAAGTGCTACAAGTTCGCCTAAAAGAATGCCGAAGTCGTCTCGCCGGTATTCATCAATCATCCGTAAACcaacaaaaaactgaaaaagcgGAACAAGTCTTTCGTTATGTTTACTGTGGGAAGCCATATTTCAGAGACAAGGACAATTTTCCAGCACCAGATAATGAAGATACCATTACAATGCAAGAGTCAGGAATGTATGACTACTCAAACATAGCATGCCTAGCCGGGTGGACAGTAAAAGACAAACAAGACTTACTCACACAGATTTTGAAAATGTCTCGTAAAATCAGAAAGACAGAACTGGAATCAAAACTTAAAGAGTTAACTAGAAAAACTAAGAAGGCAGACAGtaaaaatttacagaaagaAATCATGGAAATCAAAAAACAAATCAATAATGTTGGTAAATCAGCTCTTGATAAAGATATAGTCCTTCCTTTGGATAAAGAGTATGACTGGGAGGCGATAGCAATTGCACTCAACTTTAGACATACACCTGAAGAATATCGCTCCATAtggaaattatttttacatccCTCAATTAATAAGCAGAACTGGAGTAAATCAGAACATGCACTACTACGTCAAATTGCATTAAGAAACGAACTACAAGATTGGGATAAAATTGCTCAGGAGTTAGGAACCGGACGCTCCGGTTACCAATGTTTTGTTTACTATCGCACTAACATGGGAGGTAACTCAACAGGCCAAAAATGGTCAAAAGAGGAAGAAGAGTACCTTCGGAGACTCACTGAGTACTATAAAGAAGATCATTACATACCGTGGGGTAAAGTCTCTTCGTCAATGGATAACAGAACTAAAATTCAAATATACAATAAGTATGCAAGACTTTTGGAATTCAGAAAAGGTAGATTCCTTCCGGAAGAAGACACTGTACTACTTACAGGTGTTAGTAAATTTGGTCCAAACTTCAAACAAATTGCAAAGTTTGTTCCCGGACGTTCTTCAGCGCAATTGCGTGCAAGATACCATGTATTGAACTCCACCACACAGACTTCAGTAGTTTGGACGTGCAAAGAGGACCAGAAACTCATTCAACTAATGGCTAATCAAGACTCATCTATGTATATCAATTATGCAAACATCACACAACACTTTCCCAATAAAGACAGAAATCAATTGAGAGCTAGGTATGTGACTTTGATCAAATGGATGAAGAAACATCCAACGAGGGACATTTCCAGAGCACCTCGGAGAGGAGCACGGCGATTGACACACGGCAAAGTTGAATCAGACATGACGTTGGCAGTTGAAAAACTAAAGAAAAGAATCAAATGCGAAATTGACACCAAGAGATCTAAGAAGATTACAAAAGACTCACCGGAGGAAATGATTGAGCATGGCATCATTGCAGCCCTAATCACCGAAAATGTAAAAGAAGAAGAGTTGCACCCAACAATGTCTGACCATGACGTGTCTGAAATAGATATGCCTATGCCTACGAATACACGAATAGATGAAATAAACCTTCGAAAATTATTGATATTGCTCAAAGCCAAAATAAAAAGGCAAACTTTCGAGACTAGTATGTATGCTGTGAAATATCCCAATTTAAAACAACCAGATTCAGAGACAATTACAGTGAAAGTGAAGTCATATTCGAGGAAGGCTGCAACTAATGTCATCACAGTGGGAACACAAATTCACCCACCAGACATTTGGGGTGGCAATAGATTGACTGAAAATAACTATGTGCTTCCGCCAAACTACTCCACAATAACCGGGTGCCGGAAAATAATGGCGTTTGCTAGTGACAAATCAAACCCAAACTGCAAATCGTCAAGCTTGCATCAATACATGAAACGGAATATATTAGTAAAGGAGCAAGTCCAACTTTTCATGGACAGGTTCAATACATTGTTCATGTGGCCTATGTTGCTGTCAAATGAGCCTCCAAGAGAAggaaatgaaaaacctgttaaGAAGCCAAGTGAGGCACTTGTCAAGCGGAGAGAGTTTATGACAATACCTATGGGTTATAACGTAGTGTTACCACATACAATGAACAGTCTGGTAAATGAGAAAATTGATTTACCATCTACTTCTACGGAGAAAACTACAGTGAAGCCCAATATTGGCAATGATGATTTTTTGTATATtcagaatgatgatgatgatgatgatgatgacgatgatgatgatgataatgatgataatgatgacgatgatgacgatgatgacgacgatgatgatgatgacaaagaAGACAGTGTTGAATCTGCTGAAGATTCTGAATGA
Protein Sequence: MSDSEYTDVDGSSTDEEAREEDLRKLSQAIEPDVLASCSTEPSSTANDLNTAYKAMELNKNLDTKYHDLYKVLQVRLKECRSRLAGIHQSSVNQQKTEKAEQVFRYVYCGKPYFRDKDNFPAPDNEDTITMQESGMYDYSNIACLAGWTVKDKQDLLTQILKMSRKIRKTELESKLKELTRKTKKADSKNLQKEIMEIKKQINNVGKSALDKDIVLPLDKEYDWEAIAIALNFRHTPEEYRSIWKLFLHPSINKQNWSKSEHALLRQIALRNELQDWDKIAQELGTGRSGYQCFVYYRTNMGGNSTGQKWSKEEEEYLRRLTEYYKEDHYIPWGKVSSSMDNRTKIQIYNKYARLLEFRKGRFLPEEDTVLLTGVSKFGPNFKQIAKFVPGRSSAQLRARYHVLNSTTQTSVVWTCKEDQKLIQLMANQDSSMYINYANITQHFPNKDRNQLRARYVTLIKWMKKHPTRDISRAPRRGARRLTHGKVESDMTLAVEKLKKRIKCEIDTKRSKKITKDSPEEMIEHGIIAALITENVKEEELHPTMSDHDVSEIDMPMPTNTRIDEINLRKLLILLKAKIKRQTFETSMYAVKYPNLKQPDSETITVKVKSYSRKAATNVITVGTQIHPPDIWGGNRLTENNYVLPPNYSTITGCRKIMAFASDKSNPNCKSSSLHQYMKRNILVKEQVQLFMDRFNTLFMWPMLLSNEPPREGNEKPVKKPSEALVKRREFMTIPMGYNVVLPHTMNSLVNEKIDLPSTSTEKTTVKPNIGNDDFLYIQNDDDDDDDDDDDDDNDDNDDDDDDDDDDDDDDKEDSVESAEDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01501064;
90% Identity: -
80% Identity: -