Tabs030223.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- -
- Assembly
- GCA_029230345.1
- Location
- CM055305.1:13215081-13216956[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.011 39 5.8 0.0 48 86 103 140 101 141 0.83 2 4 0.0011 3.7 9.1 0.1 51 85 200 233 164 235 0.80 3 4 0.0044 15 7.1 0.1 48 83 288 322 271 326 0.82 4 4 0.036 1.3e+02 4.1 0.0 51 83 392 423 387 426 0.82
Sequence Information
- Coding Sequence
- ATGGAAGGCAATAATTCTCACAACCAAAGCTACTGGTTCGTGTTGCGGGAAGATCAAGGAAATGTGATATTTAGCAGTAATAACAttgctgccatacaaaatcctCATATTCCAACAGAAGTAGAGCAGCCACGGTACATAATCGAGGCGAACACCAGGCACTACCCAACAGCGCCTGAACCTCCTCCCATACAGGAAGACTCTCAAACTAGCGAAAAATCTGTGGAGAAATACCAAAAACCCAAAGATGAGTTTTGGGACAGgaacaaaataaaactacttCTCACACTATGCCTTGAGAATAAACATGTAGAGAAAGAAGCTTTATGGGAAGAGATAAGCAGCATTATTGGCACCACTCCCGATCAATGCAACATCAAGTACCGACATTTGAGGAGAACATATCTCAGACTATTGAAAAAAAAGAGATTAGGAAGAGATATCAAATGGGTTCATTACAATATTTGCGAAGAAGTATTTACTGATCTCAAAGCATTACCTCCTTCAGTACTAGAGCCTTGGGAAGATGGTAAAATCAAGAGACTGCTCAATCTATACTTAGAGTATCTGCCAAGGTTTCGTAACCCCAACTGCCTACAAAAAGATCTTTGGAAAGAAATAGCTACCCAACTTGGAACCACAGGATACAACTGTTACCATAAGTTCAAGAATTTAAGAAGGACTTACTTGAACTGGCTTAATCGAAGTTGTGAAACAGGAAAAGCAATTAAATGGGCCTACCATGAGTATTTTGAAAGAATATATTACAACTACAGTCCTCTTACAAAAGCTTGGGACCGGCACaagataaaacaattattagATGCATATGCACAAATAGCTCACAAGTTTAGAAACCCAAAATTACAAAAGAAAGAACTGTGGAATGAAATAGCAAACAAAGTTGGTGAAACACCAGACTCATGTGATAAAAAGTTTAGAAACTTAAAACAGACTTACATAAGGTTACGGCTAAAAGCAAGCTGCGGACGACCAACTACCAGATGGAGGTATTACAGAGACTTTGAAGAAATCTACAACAGCTCTGGAAGATATTTAGAAATAGATGGATCACACAGATTAGTTTATCCATCTGAGGaagaaaattatataaaacttCTGCTAGAGTTCTACATAGCCAACAAAGACAAATTCAAGGATCCATTAACCAAGAATAAAACTATATGGAGGATGATATCTCCAAAATTAGGATTATCCCCAGAAGAGTGCGACAAAAAGTTTAGAAATCTCAAACAAACTTATGTGAGACTCGCTTGGAAGAAGAAACACACTGGGAAGTGCAGCAAGTGGCCTTACTTCTCATACTTTGACCAGATCTATGAGGATGAGGAGGGTGATTACTCCAGTGGAATTGAGGCAAAGTTGGGTAGCGGTAGTTGTGACCCGGAGCCGGGGCTCGGGGAAACTCTCAGAGAACTACATGAGCGGAGAGACTCGCACCGACGATTTGAACTGCTTGCGCGCCTCGCTGAGGAATCCAATCAAATACAAAGAGAAAGGAACAGAATACTGCAAGCTCTACTTGACAGGAGATAA
- Protein Sequence
- MEGNNSHNQSYWFVLREDQGNVIFSSNNIAAIQNPHIPTEVEQPRYIIEANTRHYPTAPEPPPIQEDSQTSEKSVEKYQKPKDEFWDRNKIKLLLTLCLENKHVEKEALWEEISSIIGTTPDQCNIKYRHLRRTYLRLLKKKRLGRDIKWVHYNICEEVFTDLKALPPSVLEPWEDGKIKRLLNLYLEYLPRFRNPNCLQKDLWKEIATQLGTTGYNCYHKFKNLRRTYLNWLNRSCETGKAIKWAYHEYFERIYYNYSPLTKAWDRHKIKQLLDAYAQIAHKFRNPKLQKKELWNEIANKVGETPDSCDKKFRNLKQTYIRLRLKASCGRPTTRWRYYRDFEEIYNSSGRYLEIDGSHRLVYPSEEENYIKLLLEFYIANKDKFKDPLTKNKTIWRMISPKLGLSPEECDKKFRNLKQTYVRLAWKKKHTGKCSKWPYFSYFDQIYEDEEGDYSSGIEAKLGSGSCDPEPGLGETLRELHERRDSHRRFELLARLAEESNQIQRERNRILQALLDRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01336612; iTF_00844103;
- 90% Identity
- iTF_00844103;
- 80% Identity
- -