Tnot018574.1
Basic Information
- Insect
- Tupiocoris notatus
- Gene Symbol
- dmd-4
- Assembly
- GCA_037159825.1
- Location
- JASJUZ010000604.1:95807-104413[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-26 3e-22 78.6 8.7 1 47 10 56 10 56 0.99 2 2 1.1 6.2e+03 -2.5 0.3 5 8 235 238 232 240 0.55
Sequence Information
- Coding Sequence
- ATGAGCGCGGATGAAGAGAGAGGAGCGCGAAAGCCGAAATGCGCACGATGCCGAAACCACGGCTTCATAGCTTGGCTGAAAGGACACAAAAAAGACTGCCCTTTTTCCAGCTGCAGTTGCACCAAATGCGGCCTCATTGCCGAACGGCAAAGAGTCATGGCAAAACAGGTAGCTCTCAAAAGGCAACAAGCGGCCGAAGACAACCTAGCGCTCAATTTGAACCAAGCTGTGACTGGGAAACGTTTCCGATACTTACCCCCAGGACCAATCGTCTCATCCTTGCCAATATCGATAAAATCTGAcgATCCGGCTGAAACGGCGTCGACAAATACCGAGGACGAGAGGGAAAGATCGGCTAAACGGAGAGCGAATTTGGAACTGCTGATGAAACTTTGTCCCGACCGGAAAAGATCCGTTCTCGAACTAGTGTTCAGCAGATGCGACGAACAATTGATGTCAGCAATCGAAATATGCCTGACATCATTGAAAGATCGGGAGCAACCGAGCACCGAAACACCTGAAGAGACGTGTCTTTCCGCATTTTCACCGCCGGCTGCTCATCAGTCTTCTCGGCCTCCGCTGCCGCCGCCTCCATCGCACTTCTTCAATCCTTGCATTTCTTCATATCCGAGCTGTCCGTTCTACGCAGCGCCAACATTCAGCTTTAATTCCGTCCTTCTCCCTCCTCCACACGATCTCATGTGTGAACAgtgcaataaataa
- Protein Sequence
- MSADEERGARKPKCARCRNHGFIAWLKGHKKDCPFSSCSCTKCGLIAERQRVMAKQVALKRQQAAEDNLALNLNQAVTGKRFRYLPPGPIVSSLPISIKSDDPAETASTNTEDERERSAKRRANLELLMKLCPDRKRSVLELVFSRCDEQLMSAIEICLTSLKDREQPSTETPEETCLSAFSPPAAHQSSRPPLPPPPSHFFNPCISSYPSCPFYAAPTFSFNSVLLPPPHDLMCEQCNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386382;
- 90% Identity
- -
- 80% Identity
- -