Tnot019914.1
Basic Information
- Insect
- Tupiocoris notatus
- Gene Symbol
- SUB1
- Assembly
- GCA_037159825.1
- Location
- JASJUZ010000716.1:596185-598316[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.062 1.5e+03 -0.8 0.0 30 37 21 28 16 28 0.80 2 2 5.8e-28 1.4e-23 82.5 0.9 1 51 51 102 51 103 0.96
Sequence Information
- Coding Sequence
- ATGCCGCGAAATAAGAGGAAGGATGAATCGAGCTCTGATACCAGCGTTCATGATTCCAGCGCCGACGAGAAGCCGTCGAAAAAGGCGAAGACCGAGAAAGGAAAGTCTAGCAGTTCAGCCAACAATTCGGACCCCGATTCCATCAAAAGCTGGGATATTGGAGGTAAACGAGTCGCCAAAGTACGGAAGTTCAAAAACCGTCTCTTTGTCGACATCAGGGAATACTATATGGATAACAATGGCGATATGAAACCAGGAAAGAAAGGTATTTCCCTATCGGTCGAGCAATGGAAGAAATTGAACGCCATTGTTGGCGATATTGATAAGACTGTGGATGAAAACGATTAA
- Protein Sequence
- MPRNKRKDESSSDTSVHDSSADEKPSKKAKTEKGKSSSSANNSDPDSIKSWDIGGKRVAKVRKFKNRLFVDIREYYMDNNGDMKPGKKGISLSVEQWKKLNAIVGDIDKTVDEND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -