Tnot006803.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tupiocoris notatus
Gene Symbol
TFIP11
Assembly
GCA_037159825.1
Location
JASJUZ010000168.1:469558-471981[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-88 1.2e-84 284.6 21.9 1 275 382 652 382 652 0.99
2 2 0.37 4.3e+03 -2.6 0.0 245 265 667 687 658 692 0.63

Sequence Information

Coding Sequence
ATGTCGGATCAAGAATACGAGAAATTCGAAATCACCGACTACGATTTGGAATAtgaattcaatattaatcGGCCGGGGCGTCGGGTTTCGAAAAACCAACAAATCTACGGTGTCTGGGCCGAAGATAGCGACGAAGAAGGCGATTCGAGGCCTTCTTTCGGCGCGGGTGGACGGAAACCGAAAAACTACTCGGCACCTATCGGATTCGTCTCTGGCGGAGTTCAGCAATCGGGAAAAGACAAAGAGGACAAAGCGAAAGAAGATGGAGAAGAATCGTACGAGATCACCGACTCTGACGAAGATGTGCCGAAAGTAagttacaagaaaaaaacattcgaCCCGATGGCCGGGGTTCCCGAAGAAATCGCCGgtatgaggaaaaaaaatgcattccagCATAATCCAATTTTGGCTCAGAGAGGTGTCGGTACGTGGGAAAAACATACGAAAGGCATCGGTGCGAAATTATTGCTACAAATGGGCTTCCAACCTGGCAAAGGGTTGGGTAAAGatttacaaggtatccacgctCCTATAGAGGCCCAGTTGAGAAAAGGCAGAGGAGCTATAGGCGCTTATGGGCCAGAAAAAAGCGCTAAAATCGCCGAACTGCCGAAAATCCAGAAGAAGTCGGATATTAAAGAGATTGGTGAAAGATCGACGCAATGGAGGAAAGGCGACGGTGGCAAAAAGAAGCCGAAATACGTCTACAAGAGCATCGAGGACGTCCTTCTTGACCAGGGGTCGCAGCCGATGAGAAAACGCGAGTTCAACGAGCTGTCAAAAGTGAAGGTCATTGATATGACTGGCCCCGAACAAAGGATACTCTCCGGATACCATGCGATTTCCGGAAACCAACGCCCCACCGACGAATGGGAGCCGAAGAAGGACAAggcgttttcgaatttctcgaTGCCGGAGCTGATGCACAATTTAAACCTCTTGGTTGACATGTGTGAGCAGGATATCATCGTGAAAGACAAAGAGCTCAGGTACAACGAGGACAGAATGGTCAGTTTGGAGCATGAAgcgcaaaaattgaaaaaggtgACTGAAAATGAAAGCGTTCTCATCGAAGGGCTTGAGAGTCTTTTGGAAACATTGGAAATGCTTCAAAATGGAGCCAACAAGGGGTCGATATCTTTGGACCAATTGGCATCGGCGTATAACCGGCTGAGAGAAAAGCACCCGGCTGAATATATGATGTATGATTTGCCATCGCTGGCGCCATCGTTCATCAGGCCGATTATGAGGAACACTCTCAGCTCATGGGATCCTATGAAGAACCCGGAGGAGCCGCTTGCGGAGTTTGCCCAATGGCGGTTGATTTTATCCGAGACGCAATCCTCGCATACGCTCTCTGCTGCAAATTTGCAAAACCCGTTCGACCGATTGCTTTGGGACGCGTGGATGCCCTGCGTGCGGATTGCGGTGAACGCGTGGAACGTCAAAGATTCTGCGCCCATGATGACGCTCCTCGAAGTCTGGAAACCTTTGTTGCCGACGTGGATTCTGGATAACATACTGCAGCAACTTGTGATGCCTCGGTTGCAAAATACTGCCGAAGATTGGAACCCTTTGACGGACACGATTCCAGTGCATACGTGGACCCATCCTTGGCTTCCATTCCTGTCAAAGCGCCTGAAGACGAACGTTTTTCCCATAATCAGACAGAAACTGGCGTCTGCTCTTACAAGTTGGCATCCGTCGGATACCTCAGCTCGACTTTTGTTAATGCCGTGGGCCTCAGTATTTACTCAATCTGAAATGGACACATTCCTCATAAATAATATCATGCCCAAGTTGGGCCTTGTTTTGCAAGAGTTCCCGATCAACCCGAGCCAACAAGTAATGGAACCGTGGAATTGGGTCATGGACTGGTGCAACCTCGCTTCGCCGATGCTCATGGCGGATCTTCTGTCAAAATCGTTTTTCCCTCGGTGGCTTCAGGTTCTGACAATGTGGCTGAACATGGCGCCGAATTACGACCAGGTCACAAAATGGTACACGGGGTGGAAATCTCTGATTCCTCATAATATTCGGGAACAGCTGGGGGTTAAGGAAAGCCTGCGCACGGCATTGGAACTGATGAGCAGATCTGTCGGAGGTCCTGTAGCCCCACCGCCACCTCCTCCGCCTCCAGCTCCGTCCATATCAGACCAAAGGTTCCAAGGATTGGCCGAGGCTGCTGGAACTGCCCGTCAAATGATCGACGGGTTCAAAGATCTGGtgcaaaaacgctgcgaaGAGGCCGGAATAGTTTTTCATCCCATTGCCAACCGGTACAGAGAAGCGAAGCAAGTCTACCGTTGCGGCAATGTTCAAATGTACATAGACAGGAAGGTTATATTTTATTGCGACCCGAAAACAAACCAATGGGGCCCGATTTCTTTGCCTAATTTGCTCTTGAGtgcaaaaagttga
Protein Sequence
MSDQEYEKFEITDYDLEYEFNINRPGRRVSKNQQIYGVWAEDSDEEGDSRPSFGAGGRKPKNYSAPIGFVSGGVQQSGKDKEDKAKEDGEESYEITDSDEDVPKVSYKKKTFDPMAGVPEEIAGMRKKNAFQHNPILAQRGVGTWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGIHAPIEAQLRKGRGAIGAYGPEKSAKIAELPKIQKKSDIKEIGERSTQWRKGDGGKKKPKYVYKSIEDVLLDQGSQPMRKREFNELSKVKVIDMTGPEQRILSGYHAISGNQRPTDEWEPKKDKAFSNFSMPELMHNLNLLVDMCEQDIIVKDKELRYNEDRMVSLEHEAQKLKKVTENESVLIEGLESLLETLEMLQNGANKGSISLDQLASAYNRLREKHPAEYMMYDLPSLAPSFIRPIMRNTLSSWDPMKNPEEPLAEFAQWRLILSETQSSHTLSAANLQNPFDRLLWDAWMPCVRIAVNAWNVKDSAPMMTLLEVWKPLLPTWILDNILQQLVMPRLQNTAEDWNPLTDTIPVHTWTHPWLPFLSKRLKTNVFPIIRQKLASALTSWHPSDTSARLLLMPWASVFTQSEMDTFLINNIMPKLGLVLQEFPINPSQQVMEPWNWVMDWCNLASPMLMADLLSKSFFPRWLQVLTMWLNMAPNYDQVTKWYTGWKSLIPHNIREQLGVKESLRTALELMSRSVGGPVAPPPPPPPPAPSISDQRFQGLAEAAGTARQMIDGFKDLVQKRCEEAGIVFHPIANRYREAKQVYRCGNVQMYIDRKVIFYCDPKTNQWGPISLPNLLLSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-