Basic Information

Insect: Tuberolachnus salignus
Gene Symbol: L
Assembly: GCA_956483605.1
Location: OY101429.1:20087700-20097418[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.4 1.6e+02 3.4 7.0 1 23 68 90 68 90 0.97

2 21 5.9e-07 6.4e-05 23.5 5.6 1 23 96 118 96 118 0.99

3 21 7.4e-06 0.0008 20.1 0.9 1 23 124 146 124 147 0.96

4 21 0.00011 0.012 16.4 2.0 1 23 164 186 164 187 0.96

5 21 1 1.1e+02 3.9 0.3 1 23 211 234 211 234 0.94

6 21 1.8 2e+02 3.1 0.6 1 23 275 298 275 298 0.94

7 21 0.012 1.3 10.0 3.6 2 23 469 490 468 490 0.94

8 21 6.8e-05 0.0074 17.0 2.2 1 23 498 521 498 521 0.96

9 21 5.7e-05 0.0061 17.3 0.4 1 23 526 549 526 549 0.95

10 21 0.00074 0.08 13.8 0.8 2 23 599 620 598 620 0.96

11 21 0.068 7.4 7.6 3.6 1 23 624 646 624 647 0.96

12 21 1.2 1.3e+02 3.7 0.4 3 23 691 713 690 713 0.86

13 21 0.001 0.11 13.4 4.6 2 23 727 748 726 748 0.96

14 21 0.0023 0.24 12.3 0.3 1 23 758 780 758 780 0.98

15 21 0.12 13 6.8 1.9 2 23 788 809 787 809 0.97

16 21 0.00029 0.032 15.1 1.8 2 23 883 905 883 905 0.97

17 21 0.085 9.2 7.3 1.4 1 23 909 931 909 931 0.97

18 21 0.15 16 6.5 0.0 2 23 943 964 942 964 0.95

19 21 0.0068 0.73 10.8 0.0 1 23 972 995 972 995 0.96

20 21 2.4 2.6e+02 2.8 0.2 1 23 1002 1026 1002 1026 0.93

21 21 0.055 5.9 7.9 5.4 1 23 1053 1075 1053 1076 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.4	1.6e+02	3.4	7.0	1	23	68	90	68	90	0.97
2	21	5.9e-07	6.4e-05	23.5	5.6	1	23	96	118	96	118	0.99
3	21	7.4e-06	0.0008	20.1	0.9	1	23	124	146	124	147	0.96
4	21	0.00011	0.012	16.4	2.0	1	23	164	186	164	187	0.96
5	21	1	1.1e+02	3.9	0.3	1	23	211	234	211	234	0.94
6	21	1.8	2e+02	3.1	0.6	1	23	275	298	275	298	0.94
7	21	0.012	1.3	10.0	3.6	2	23	469	490	468	490	0.94
8	21	6.8e-05	0.0074	17.0	2.2	1	23	498	521	498	521	0.96
9	21	5.7e-05	0.0061	17.3	0.4	1	23	526	549	526	549	0.95
10	21	0.00074	0.08	13.8	0.8	2	23	599	620	598	620	0.96
11	21	0.068	7.4	7.6	3.6	1	23	624	646	624	647	0.96
12	21	1.2	1.3e+02	3.7	0.4	3	23	691	713	690	713	0.86
13	21	0.001	0.11	13.4	4.6	2	23	727	748	726	748	0.96
14	21	0.0023	0.24	12.3	0.3	1	23	758	780	758	780	0.98
15	21	0.12	13	6.8	1.9	2	23	788	809	787	809	0.97
16	21	0.00029	0.032	15.1	1.8	2	23	883	905	883	905	0.97
17	21	0.085	9.2	7.3	1.4	1	23	909	931	909	931	0.97
18	21	0.15	16	6.5	0.0	2	23	943	964	942	964	0.95
19	21	0.0068	0.73	10.8	0.0	1	23	972	995	972	995	0.96
20	21	2.4	2.6e+02	2.8	0.2	1	23	1002	1026	1002	1026	0.93
21	21	0.055	5.9	7.9	5.4	1	23	1053	1075	1053	1076	0.91

Sequence Information

Coding Sequence: ATGTTATCGGCCGCTAGGACCATCCGGTCGTACGATCAATCATTCAATTCTCAACCGCTTTTGATTTCCATGTCCGGACCTCCGTTTAGAGATTCTACGACGCTCTTTACCACGTCTTTCCGTCTCAAACGGGGTTGTCAAAGAGGTTTATTCTCTTCTCGGTTTTCTGTCATTCCCAATactcaTGGAGAATCAATGCCGTTCAAGTGTCAATTCTGCCGGAGGCTGTTCAAACACAAACGCAGCCGAGACCGGCACGTAAAACTACACACGGGGGACAAGAAGTACAAGTGCACTCAGTGCGACCATGCTTTTTCAAGGAGCGATCACTTAAAGATTCACATGAAAACGCACGACAATCAAAAACCGTTCCAGTGTACCGTGTGCAATAGAGGCTACAGCACGGCGGCCGCGCTCACGTCGCACATGCAAAACCATCACAAGCGGGCCGCGGAACGGGTCAACTCGCCGCAGATCACCGGCCCGTCGTACAAGTGTCTGCAGTGCACGCAGATATTTCGCAAACCCGACGAGTTACAGAATCACACCGCGACGCACCATCTTGGGGAACAGCCGTCGTCGAATTCCCGAAGTTCAAAACGTTCAACGCCGCCGAAAACGCCTAATCAATACATATGCATGTATTGCACCATAGAAATGCCCAGCATGGACGCCCTGCAACGGCATTTTCAGTCCAAACACTCCGCGATCGTCAACGGTAAGCCCCAAGAAGACATTTTCGCGGCCataccgtcggcggcggcggccgcggccgcgttCCCGTGGCTAAACCTGGATTCGCCAGCCCTGACCTTGCCGCCGTACTCGTGTCGGTTGTGCATGAGTCAGTTCCCGTCCGTCGGTTCGTTGCAAAAACACTTTACCACTGCACACTATCTAAACTTCGTcctcaacaacaacaacaacaataacaacaacaacaacaacaacaacaacaataacgggTGCAAAAACGTCGGTATGATACCGCTATTCAATTGGCCGGCAATTACGAACGGATACCACAACAACAATCATCACCAACCGCCGCCGGTCAGTGTCGGCACCGGTGCGGGTTTCTTGCCCGAGGAAACCGTCCAAACAGGTCCCACTGACTTGTCCGTATCGTCGTCCAACAAGCAGCACGGCGGTGGTAAGCACAATCACTCGTCTTCGGGCAAACATAAGTCGGCGGACGATCCGCGAAACCACGGGAGCAGCAAAAAGTCGCGTCCGTCGCCCGGGAGCGAGTTGCTCGCCGCCCAACACGTGATCGACCAGCGACTCATTAAACAGGAACGCTGCGGGTACGATGGCAGTAAGGtccagcagcagcaacagctaCAGCCGCCTTCGGTCAGGCCGACCGCTGTCGCCGGTCCCGTCGTAAATAAGAACCAGTTGCCGTGTCCGCAGTGTCATCAGACGTTCACGCACATCAACGACTACCAGCATCACGCCATCAACCATTTCCTGATGGCTGCCACCGAGTACTCGTGCCAAGAGTGTTCCACATCATTCAGCACGTCCGAGCACGTCCAAAAACACCTGATGGAAACGCACGCGCAAAACTATTATCAGTGCATGTTGTGCAATGAAGTGTTCCCGACCAAATCAGCGCTGAAGGTGCATTTCAGCATGAACCACGGTAGCGAGAACCGGATGTTCCGATGCAACAATTGTACCGGGGCGTCAAGACCGCTGTTTCATACGGAAATTGAATTCGTTGACCATCTGAGAAACACGCATTACTCCGCGAGATCACCACCGCCGGTCCAAACCAGTCTAATGTTAAGATGTTTAGTATGCCACGCCACGTTCAACTCGCAATCTGATATGGAACAACATCTAGCTAGTCATTCCAAACAATTCCAATGCCAGTTTTGTTCGGAAGCGTTCCATATTGAGTTCTTGTTAGACAGACACATACAAACGCATCACAGTTCTACGATATTAAGTCATCTTAACCGAAATCACAGGGAATCGCCGAATTCCATGTGTGCTTCGCCCACTTACATGTCCAGGTCAGTCGACGGTGGCAAACATCTGGTAGAAAACGGAATCAACGCGTGTGATATAtgcgaaaaaaatgattttcgaaCCGAATTGGACTTGATCACGCATAAAAGAACGCAACATCAGGTCAAACCTACGAATCTTTCAACAAAAGTGAGCCTACACTGTGCATATTGTAACGAAAATTGCAAATCGAGAACAGAACTAGAAAACCACATGAAGACACACTCGCAACACGGTTCAAACGTTGGAAAACACAAGTGTAACATTTGCGACGAAATCTATCAGTCTGCAATTAGCTTGGCCGAACACAAACTCACTCACTGCAAGgtggCGACAAGTACTGTGTGCAGTCATTGTAAAATGATTATTGACAACGAAAGTCAATTCTACCAACACCTCCAGAAGCACTGCAACCCAGTCAACGTGAACGGCGGTCAAGTGACTTTTCCCACTTCGTGCATCATATGCAGACAAACGTTGGTCTCGGACATCGAGGTCAAGGTGCACGTGCACTATCACCTGTCGCGGCTCAAAGAACCGCCGGCTGTGTGCGGCAATTGCAACAGATACAAATCGTCTCCGTTATCGCCGTGCGCCGGTTGCAATCCCGCTAGGAACGCCTCGGAACGGTGTCCCGACTGCAGAACGACGTTCGAGACGTTCGGTTCTCTGCAGCATCATCTGACCACCGTTCACAGAAAACCGTTCCATTGTTTCAAATGCAAGATCGGATTTGAGACCCAACAAGAAGCCACGATCCACCTCGGCACACACCTGGCCACGTTGAACGGCTGCGTGGACGGTATCGAGTGCGGCCTCTGCCCGTGCGTACTACCCACAGCCAACGGCCTGCAGACGCACTTGATCGAGCACACGTTTGCCGGCTGCAAGGCGTTCACGTGCTACCTGTGCTCGGCGATATTCACCGCGCCCACGGGTCTCCAGGCGCACATGACCGTCGACCATTCCACCGAGACGCCGCCGTATGACTGTCCCAGGCCCAGCTGTCAGGCGAAGTTCTTCTTCACCGCCGAACTTGACCGGCACACGCTCGAACACCAAGGGCAAGACGTGCTCGCAAACATGAATTTTTACAAGTATCAAAACAAGCTGATGTCCATCTGTGATAAAAACACGTTCAAGTGTACCGAGTGCTACCTGAGCTTCTCGACGCAGACTGATTTACAGTGTCACGTGTACGAGCACCACCATCAGGTGTCTAGGGAACCGTCGTCTTTGGCGCTGGAGAGCAAAGAAGGCGTGAAACAGGAAAAGGTGGCGGCGGGCTGCGGCGAACCGACGAACGGCGGCGACGCGGCCAAGGACGACGGGACGGGTGCAGAGAAGCCGATCAAGGCGGAGAGTCAGGACGAACGGGTGAACGTCAAGACGGAAAAACACGAAAGagaagaagacgacgacgacgacgacgaagagcTGATCGACGTGGGTGTGAACAACCGGACCGAAGCGAACAAGTCGCGAGTGGACAACAACGCAGACGCCGCTCATTGA
Protein Sequence: MLSAARTIRSYDQSFNSQPLLISMSGPPFRDSTTLFTTSFRLKRGCQRGLFSSRFSVIPNTHGESMPFKCQFCRRLFKHKRSRDRHVKLHTGDKKYKCTQCDHAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYSTAAALTSHMQNHHKRAAERVNSPQITGPSYKCLQCTQIFRKPDELQNHTATHHLGEQPSSNSRSSKRSTPPKTPNQYICMYCTIEMPSMDALQRHFQSKHSAIVNGKPQEDIFAAIPSAAAAAAAFPWLNLDSPALTLPPYSCRLCMSQFPSVGSLQKHFTTAHYLNFVLNNNNNNNNNNNNNNNNNGCKNVGMIPLFNWPAITNGYHNNNHHQPPPVSVGTGAGFLPEETVQTGPTDLSVSSSNKQHGGGKHNHSSSGKHKSADDPRNHGSSKKSRPSPGSELLAAQHVIDQRLIKQERCGYDGSKVQQQQQLQPPSVRPTAVAGPVVNKNQLPCPQCHQTFTHINDYQHHAINHFLMAATEYSCQECSTSFSTSEHVQKHLMETHAQNYYQCMLCNEVFPTKSALKVHFSMNHGSENRMFRCNNCTGASRPLFHTEIEFVDHLRNTHYSARSPPPVQTSLMLRCLVCHATFNSQSDMEQHLASHSKQFQCQFCSEAFHIEFLLDRHIQTHHSSTILSHLNRNHRESPNSMCASPTYMSRSVDGGKHLVENGINACDICEKNDFRTELDLITHKRTQHQVKPTNLSTKVSLHCAYCNENCKSRTELENHMKTHSQHGSNVGKHKCNICDEIYQSAISLAEHKLTHCKVATSTVCSHCKMIIDNESQFYQHLQKHCNPVNVNGGQVTFPTSCIICRQTLVSDIEVKVHVHYHLSRLKEPPAVCGNCNRYKSSPLSPCAGCNPARNASERCPDCRTTFETFGSLQHHLTTVHRKPFHCFKCKIGFETQQEATIHLGTHLATLNGCVDGIECGLCPCVLPTANGLQTHLIEHTFAGCKAFTCYLCSAIFTAPTGLQAHMTVDHSTETPPYDCPRPSCQAKFFFTAELDRHTLEHQGQDVLANMNFYKYQNKLMSICDKNTFKCTECYLSFSTQTDLQCHVYEHHHQVSREPSSLALESKEGVKQEKVAAGCGEPTNGGDAAKDDGTGAEKPIKAESQDERVNVKTEKHEREEDDDDDDEELIDVGVNNRTEANKSRVDNNADAAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00340833;
90% Identity: -
80% Identity: -