Tdic004189.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trypoxylus dichotomus
Gene Symbol
nfxl1
Assembly
GCA_014905495.1
Location
BNES01000012.1:4806700-4816649[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2 2.5e+04 -7.8 5.6 15 19 162 166 161 166 0.81
2 16 0.46 5.7e+03 -2.1 0.9 4 10 197 203 197 203 0.91
3 16 3.9e-08 0.00048 20.5 16.8 1 19 211 228 211 228 0.99
4 16 5.7e-07 0.0071 16.8 15.9 1 19 264 282 264 282 0.95
5 16 4.4e-08 0.00055 20.4 16.1 1 18 317 334 317 335 0.97
6 16 1.1 1.4e+04 -3.3 0.7 5 10 359 364 359 364 0.91
7 16 2e-05 0.24 11.9 12.5 1 18 370 387 370 388 0.98
8 16 0.36 4.5e+03 -1.7 0.6 1 5 397 401 397 406 0.89
9 16 5.5e-05 0.69 10.5 17.1 1 18 422 439 422 440 0.94
10 16 1e-09 1.3e-05 25.6 14.7 1 18 449 466 449 467 0.98
11 16 0.00022 2.7 8.5 4.1 10 19 516 525 513 525 0.89
12 16 2 2.5e+04 -5.1 9.6 1 12 535 545 528 545 0.84
13 16 1.5 1.9e+04 -3.7 2.7 14 18 573 577 573 578 0.90
14 16 4.4e-06 0.054 14.0 4.6 1 11 614 624 614 629 0.89
15 16 0.0003 3.8 8.1 16.5 1 19 654 671 654 671 0.93
16 16 1.4e-05 0.18 12.3 11.1 1 15 714 727 714 734 0.89

Sequence Information

Coding Sequence
ATGAGTGATTTTAGAAGAAGACAATCAAAACCAAGGAATCCTTGGACCATAACAGAACCCCAGAAACTGGATGGTAGTCAAAATGGAAGTCGGAATTCGGATAAATTTACAGAAGCTTCAAGAAAACACCAGGCAGCTGCACAGAAGTATGTTCTGGATTATGATTCCTCGTCTGAAGAAGATGAATTGGAATCTGGGAATATTATCCaaattattttgaaagagTATGCATCCACTGGAGTAGAATtggataattttaaaagaactaaAGGCTATCTTGAGGATGCATTCGTGTCAGGGGCTGCTACTTGTTTAATATGCATATCGCACATTAAGCGTAATGATCCGatATGGAATTGTAGTGAATGTTACTGTAGTTTTCATTTAATGTGTATTCAGAGATGGTCAAAAGATACTGTTTTTAATCAGAAACAGTTGTCAGAGGAACATACACAtgtaaaaaacataaatattgctTGGTGTTGTCCAAAATGCAGACAGGAATATAGTCCAAATGACATTCCTACTGAATATAGATGTTTTTGTAAGAAGGCTCTAAATCCAGCATATCAGTATTTATTAATACCACATTCGTGTGGTAATACTTGTCGTAAGGAGCTAAAACCAAGGTGTGGTCATCAGTGCATATTACTTTGCCATCCTGgTCCATGCCCACCTTGTCCAAAGATAGTTAATATCAGTTGCTATTGTGGCAGTAAACCTGCCAAATCTCAAAGATGTTCGAATAAAGAATGGTCTTGTGGATctgtatgtaataaattactagCTTGTAATAAGCACAAGTGTGCTCAATCTTGTCACCCAGGTGAATGTGAACCATGTCCTAAGAAAAGCATACAAAAATGCCTTTGCGGTTTGAATCAAAAGCTGAGAGATTGTGCTTCTCCAATATGGCAGTGTGAAAAAgAATGCGGCAAAGCATTAACCTGCGGCCACCATAACTGCGTAAAAATTTGTCATTCCGGAGATTGCGGGCCCTGTGAACTCTCAGAGCTTAGAACTTGCCCATGTGGTAAGTCAACATATCAGTTACCATGTACGGAAGATACTCCCACATGCGATGACACCTGTGGAAAACTTCTAGAGTGTGGTCAACATATTTGCAATCAAAAATGTCATAAAGATACATGTGGATCAtgCGTAGAAATTGTTCTGAAGTCATGCCGGTGCGGACTTCACACCAAAGAAGTCCAATGTAAGAAGCAGTATTTATGTGAAACAAAGTGTAAACAGATGAAGGATTGCAATAAACATCCATGTAATCGTAAGTGTTGCGATGGAAATTGTCCGCCATGTGAAAAACCATGCGGAAAAACCTTAAGCTGTGGAAATCATAAATGTGCGTCTATATGCCATAGAGGTCCCTGCTATCCATGTCATCTAACTGAAAATGTTTGCTGTCGTTGTGGTCTAACTTATCTGACAGTAGCTTGTGGAAGAAAGTACAAAACCCGTCCGCCGAAATGTCTTAAGTCGTGCTTgGTTCCTCCAGAATGTCATCATCCAAAGCGCGAGAATCATCGATGCCATTTTGGAGATTGTCCATCTTGCCGGCAGGTTTGTGGAAAAATACATGAGAAATGTTCACATCCTTGCCCGGTTGAGTGTCATACTTCGGTTCTGGTAAAAGTACAAACAAAAAGGCCGTCAATGCCGTGGGAGCAGGTGGCTCCGATATTAGAGAAAAAGTCACTTCCATGTCCCAATTGTGTTGTGCCAGTGCGAGTAACTTGTTTAGgAGAACATGATAATACAGATTTACCATGTTACATAGCTAAACCTTCCAGTTGCGGGAGGCCATGTGGAAGAATCTTAAAATGTGGAAATCATACTTGCCAAATGGAATGCCACGTTATTGAAGGACCTCATGACGTGGTTCGCGCTGGAGATAACTGTGACATTTGTACTAATCCTTGCACTAATCTTCAACCGGACGGATGTAGTCATCAGTGCCCTAAACCTTGTCATTCAGATAGCTGCCCACCATGTACACAGATGATTCGAATTAGATGCCACTGTGGGTTGAATCAGCCATATGTGGCTTGCAAAGATTGGACAAGCACGgaagataaagaaaaattacaaagttgcGGTAATCAATGTCCAAGTAACTACGAATGTGGCCACAGATGTCGGTCCAATTGTCATTCAGGTCCTTGCATTAGTCAAGAAAGTTGcaagaagaaaatcaaaatcAGTTGTCAATGCAAACGCATTAAAAAGGAGTACTCTTGCGAATTAGTACGACAAGGCGCTGCAGTGGTGCATTGCGATGAATTCTGTgaacaaaagaagaaagaagaagaggagATGAACCAAATGTATCTGGAactaaaaaggaaagaagaagagGATAAAAATCGAAGAGAATtggagaaatacaaaaaaatgttccatggtaaaaaaaagaatagagaACGTAAAGTTCATGAAGAAGAAGAGGCAAAAAATTTCCTCTCCGGATATAAAATTCCTATGTTTTTCGCTGTTTTGGGGGTCATTTCTGCCCTGTTCTACGTTTACGTCTACTAA
Protein Sequence
MSDFRRRQSKPRNPWTITEPQKLDGSQNGSRNSDKFTEASRKHQAAAQKYVLDYDSSSEEDELESGNIIQIILKEYASTGVELDNFKRTKGYLEDAFVSGAATCLICISHIKRNDPIWNCSECYCSFHLMCIQRWSKDTVFNQKQLSEEHTHVKNINIAWCCPKCRQEYSPNDIPTEYRCFCKKALNPAYQYLLIPHSCGNTCRKELKPRCGHQCILLCHPGPCPPCPKIVNISCYCGSKPAKSQRCSNKEWSCGSVCNKLLACNKHKCAQSCHPGECEPCPKKSIQKCLCGLNQKLRDCASPIWQCEKECGKALTCGHHNCVKICHSGDCGPCELSELRTCPCGKSTYQLPCTEDTPTCDDTCGKLLECGQHICNQKCHKDTCGSCVEIVLKSCRCGLHTKEVQCKKQYLCETKCKQMKDCNKHPCNRKCCDGNCPPCEKPCGKTLSCGNHKCASICHRGPCYPCHLTENVCCRCGLTYLTVACGRKYKTRPPKCLKSCLVPPECHHPKRENHRCHFGDCPSCRQVCGKIHEKCSHPCPVECHTSVLVKVQTKRPSMPWEQVAPILEKKSLPCPNCVVPVRVTCLGEHDNTDLPCYIAKPSSCGRPCGRILKCGNHTCQMECHVIEGPHDVVRAGDNCDICTNPCTNLQPDGCSHQCPKPCHSDSCPPCTQMIRIRCHCGLNQPYVACKDWTSTEDKEKLQSCGNQCPSNYECGHRCRSNCHSGPCISQESCKKKIKISCQCKRIKKEYSCELVRQGAAVVHCDEFCEQKKKEEEEMNQMYLELKRKEEEDKNRRELEKYKKMFHGKKKNRERKVHEEEEAKNFLSGYKIPMFFAVLGVISALFYVYVY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00434531;
90% Identity
iTF_00627904;
80% Identity
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