Tdic010344.1
Basic Information
- Insect
- Trypoxylus dichotomus
- Gene Symbol
- stc
- Assembly
- GCA_014905495.1
- Location
- BNES01000034.1:189124-197155[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.9 2.4e+04 -4.1 1.6 15 19 333 337 332 337 0.81 2 17 0.14 1.8e+03 -0.4 0.6 4 10 366 372 365 377 0.94 3 17 1.3e-05 0.16 12.5 14.1 3 19 380 396 372 396 0.87 4 17 0.4 5e+03 -1.9 1.0 5 10 421 426 421 426 0.95 5 17 9.4e-09 0.00012 22.5 13.5 1 18 432 449 432 450 0.97 6 17 1e-10 1.3e-06 28.8 14.3 1 19 490 508 490 508 0.99 7 17 2 2.5e+04 -4.3 1.3 6 10 538 542 538 542 0.96 8 17 0.0024 30 5.2 18.7 4 19 555 570 548 570 0.87 9 17 1.3 1.6e+04 -3.5 2.0 5 10 599 604 599 604 0.93 10 17 0.96 1.2e+04 -3.1 10.6 1 11 610 620 610 622 0.91 11 17 1.2 1.5e+04 -3.4 0.8 5 10 626 631 624 632 0.59 12 17 1.1e-08 0.00013 22.3 11.5 1 19 637 655 637 655 0.98 13 17 2 2.5e+04 -4.5 1.4 6 10 684 688 684 689 0.66 14 17 0.0016 20 5.8 9.9 10 19 702 711 694 711 0.88 15 17 0.19 2.4e+03 -0.9 0.3 6 11 714 719 714 720 0.94 16 17 6.6e-06 0.082 13.4 16.9 1 19 747 766 747 770 0.92 17 17 3.6e-05 0.45 11.0 15.4 3 19 777 795 776 795 0.93
Sequence Information
- Coding Sequence
- ATGTCTAATTGGAACGCAGATAATTATTTGGACCGGGACCAATCACTTAATAACTTTCGAGCTCAACAGTTTCATTTGAATGAACTGCATACTGatacatttcttaatattaCTGGGTCATATTCTTCAACTGAAAATAATGTTTCGGGATACAATAATACTGTTGCGAACAACTTGCCATCAACCGTATCGGGAGAAACTTCTACTCCACAAGTGTCGAACTTTATTGATATCTCACATTCCAAATTAACCGCAACAGCTGCAGAATTTAAACCAAGAAGTCAGACAGTTACTCCATCTGCAAATAATGTTAGTAATGGAACGATAAAAAGACCACAACcaaacattcaaaataaaaaaggtatTACTAATAAATTTCCTCAAGGACATACTAAATCTTATAAAAAGCAGTATTTGAAATACACTGAATTAAGTGGTTCTGATAAAACAGGCATAGCTGAAGTAAGAGAAAGTAATAAGGTGCAATTTTCAAAGAGTAGAGATCAGAAAAATACTATAGCAATAGATCAAATTAACAAACAGGCAGTTGAAGAGAATAAAGAAGTGAAGGAGAATGGTAAAAACCATTTTAGAAGTAGATTTGGTGACCAATATTCAAAAAGCAATGCAAACCTCGATTTTAAAAAGAGGTGGAACAAAAATGCGCATTATAGATATAATAGGAAGTATGATAGTCATGAAAATAGAAACTTAATACATAAAGAAAACTGGAGGCAACCTTCTAGTAGTACTAGTGAgatgaataaacaaaataaaatacggaAACCTGAACAACAGTTGGATTTTAAAAGTGCAGCATCCCAAAGAGAGCGATTACAGCAGATGTTGGAACATTTGCAGTTGGAATGTATGGTTTGTTGTGATAAACTTCGTCATACAGATTTGGTATGGTCTTGCAAACAATGCTACAATATTCTTCATCTTAGTTGTGTTAAACAATGGGCTCACACCTCTAAGATGGAAACTGGTTGGAGATGTCCAGCCTGTCAAAATAACTATTCGGACGTTCCAAAAGATTATTATTGCTACTGTGATAAAGTTATTAATCCCAAGTATGATCCTGGAAATTTAGCTCATAGTTGTGGGGAAATATGTGGACGCAAAGGAAAGACTTGTGATCATACATGCGTACTTCTGTGTCATCCAGGACCGTGTCCTGATTGTACTGTTCCAATATCCAAAGCTTGTGGATGCGGCGCTACTAAAGCAGCAGTAATATGCAGTACAGATGTGCCCGTTACTTGTcaaaacatttgcaataaacTTCTTAATTGTGGTATTCACACTTGCTCGTCAACATGCCATCCTGGTGAATGTCGGAAATGCGAATCTTTCGTTAGACAGGAGTGTTATTGCGGAAAATTAGGCCGAAAGATATCTTGCACCTTAGAAATACAGGGCgttgaattttttgaatgtgATGATATCTGTGGTAAACTATTAGATTGTGGTAATCATAAATGTCAATTAGTTTGCCATTCTGGTTTGTGTCCTCCATGTCCAAGATCAATTAATGTTGTTACTACTTGTCCATGTGGTCAAACAAAATTAACTGCGGAAAGAACATCTTGTTTTGATCCTATTCCTTGTTGTGAAAAGatttgtaataaaacatttacttgTGGGCAACCGAATGATCCGCATTGCTGCCAAAGTAATTGTCATAATGGTGTTTGTCCTCCATGTCCATTAACAACAGTAGTAAAATGCCGTTGTGGTTATATGGATAGAGAAATTGTATGCAGAAAGGTGACTACTAAAGCTGATGATGCGCGTTGTGAAAAAAAGTGTACTAAAATGAGACATTGCTGCAAACATAAATGCAATCAATTTTGCTGTGTTGAAGTGGATCATATTTGCCCTTTGCCTTGCAATCGTTCTCTGTCCTGTGGTTTGCATCGGTGTGAAGAAGGTTGTCACAGAGGTCGTTGCGCCCCATGCTGGCGATCTAGTTTTCAAGAATTATATTGCGAATGCGGTGCTAGCGTTATTTATCCTCCTGTTCCGTGTGGCACAAGACCGCCAATTTGTAACAAACCCTGTCCACGCATTAGGAGTTGCGGTCATGATGCGTTTCATAATTGTCACGTTGGCTCATGCCCTCCATGTACAGTTCTTTGCAAAAGATGGTGTCATGGAAAACATGAACAAAGGACTACAATTCTTTGTCATCAAGATGATTTTAGCTGTGGATTACCCTGTGGAAAAAGTATGCCATGTGGTCAACATAAATGTATTCAAATTTGTCACACTGAGGACTGTCCAACTCCCTGCACCCAACCATGCCcgaaaattcgccaaaattgcGAGCACCCATGCAATCAACCATGTCACGAGGGGGAATGTCCCGATGTACCATGTAAGAAAATTGTCCGTGTAACTTGTCAATGTGGTTTAAGATCATCAACAAGAGTATGCATGGATTTGACAGGGGAATACCAAAGTATCACAATGAAACAACTTGCTTCTAAAATAGCTGATATTCAAAAAGGTCAAGCTGTAGACATTACAGATATCGTGAGTAATCAGAAGAAATGTGGAGCGCTTAAGACGTTGGAGTGTATCGAAGAATGTCGTGTTGCGGAAAGAAATAGACGTTTAGCTATTGGTTTACAAATTAGAAATCCAGATTTGAGTGCAAAATTAACTCCAAAATATTCGGATTTTATGAGAAACTGGGCGAAAAAGGATGCTCGATTTTGTCAACACGTTCATGATAAACTTACAGAACTAGTACAAAAAGCAAAGCAAAGTAAACAAAAGAGCCGCTCGCATTCATTCGAAACTATGAATCGTGATAAAAGATTATTCGTTCATGAATACTGTCAAATGTTCGGATGCGACAGCGAAGCGTATGATGCTGAGCCTAATCGCAACGTCGTAGCTACTGCTTATAGAGATAATTCGTGGTTACCAAGTATCGGACTTTTGGAGCTAATACAACGTGAAAACGGCCAACGTAAAGTGCCTGGTCctgtattagaaaataaaaataatccttTTGCGAAACGAGAATTGGTTCCATTAAAACCGTCGAGTAAATCGAATCATCCATCAACTCCACCAGGGGAATACGTAGACTATTTTGATGATCCACCACTTTag
- Protein Sequence
- MSNWNADNYLDRDQSLNNFRAQQFHLNELHTDTFLNITGSYSSTENNVSGYNNTVANNLPSTVSGETSTPQVSNFIDISHSKLTATAAEFKPRSQTVTPSANNVSNGTIKRPQPNIQNKKGITNKFPQGHTKSYKKQYLKYTELSGSDKTGIAEVRESNKVQFSKSRDQKNTIAIDQINKQAVEENKEVKENGKNHFRSRFGDQYSKSNANLDFKKRWNKNAHYRYNRKYDSHENRNLIHKENWRQPSSSTSEMNKQNKIRKPEQQLDFKSAASQRERLQQMLEHLQLECMVCCDKLRHTDLVWSCKQCYNILHLSCVKQWAHTSKMETGWRCPACQNNYSDVPKDYYCYCDKVINPKYDPGNLAHSCGEICGRKGKTCDHTCVLLCHPGPCPDCTVPISKACGCGATKAAVICSTDVPVTCQNICNKLLNCGIHTCSSTCHPGECRKCESFVRQECYCGKLGRKISCTLEIQGVEFFECDDICGKLLDCGNHKCQLVCHSGLCPPCPRSINVVTTCPCGQTKLTAERTSCFDPIPCCEKICNKTFTCGQPNDPHCCQSNCHNGVCPPCPLTTVVKCRCGYMDREIVCRKVTTKADDARCEKKCTKMRHCCKHKCNQFCCVEVDHICPLPCNRSLSCGLHRCEEGCHRGRCAPCWRSSFQELYCECGASVIYPPVPCGTRPPICNKPCPRIRSCGHDAFHNCHVGSCPPCTVLCKRWCHGKHEQRTTILCHQDDFSCGLPCGKSMPCGQHKCIQICHTEDCPTPCTQPCPKIRQNCEHPCNQPCHEGECPDVPCKKIVRVTCQCGLRSSTRVCMDLTGEYQSITMKQLASKIADIQKGQAVDITDIVSNQKKCGALKTLECIEECRVAERNRRLAIGLQIRNPDLSAKLTPKYSDFMRNWAKKDARFCQHVHDKLTELVQKAKQSKQKSRSHSFETMNRDKRLFVHEYCQMFGCDSEAYDAEPNRNVVATAYRDNSWLPSIGLLELIQRENGQRKVPGPVLENKNNPFAKRELVPLKPSSKSNHPSTPPGEYVDYFDDPPL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121258; iTF_00956721;
- 90% Identity
- -
- 80% Identity
- -