Tatt002363.1
Basic Information
- Insect
- Trypoxylon attenuatum
- Gene Symbol
- Rel
- Assembly
- GCA_963989405.1
- Location
- OZ022488.1:21899133-21903226[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-43 1.4e-39 135.9 0.5 1 168 81 270 81 271 0.92 2 2 1 6.6e+03 -3.0 0.4 111 136 743 769 719 771 0.58
Sequence Information
- Coding Sequence
- ATGTCGGAATTATGCGAGACTCGAATAGGATTGTCTGGTGGTTTCTTTGACAATCCAGCCTACCTATCCGGAGGATATGgtATGGTGCCGTCAAGTAGTCAGGGCAGTTATAGCCCATTCAGTGGATCCTCAGTTTCGCAAGAAGCAAGGATACCTTCGCCAGGGTCAATGTCACATTCGCCATTACACGGAACGGATTATATTATGTTAAACAATGCAACTGTTATCGGAGAACCGTTCATCAGTATCGTTGAACAACCAATTGATAAATTCAGATTTCGTTATAAATCAGAGATGATAGGTACACACGGAAGCTTGGTAGGAGCTAGTAGTGGTCCAAATCGCAAGAAACAGGCACCAACAGTTCAGTTACATAATTACTCTGACAAAGCAATAATCAGATGTACGTTAGTTACGTCGGAAGATGGGAAAAGAATACCCCATGCACACAGATTGGTCAGAAGAGAGGGTAATGAGGATGTCGATGATCCTCATCACGTAGAGGTTTCACTTGAAACAGGATATACTGCATCGTTTCATGGAATGGGTATTATACATACAGCAAAAAAGCATATCAAGGGTGAGCTAGTAAGAAAAATGAGGAACGAAGCACTGGAgaaagtaaaaagaagaaacattaATGAATCGCTCACCGTTCGCGAAGAAGCACAGATTCTAGCTGATGCAGAGAGCTACCAAAAGTGCGTGAATTTGAACAGTGTTTCATTATGCTTTCAAGCATTTATCTTAgattacaataaaattatgACACCAATAACGGATCCTGTGTATTCGAATCCTATCAATAATTTGAAAAGTGCATTAACCGGAGAGCTTAAAATCTGTAGAATCGATAAAAATACCGGTAGCtgcgaaggaggagaagaagttTTTATATTTGTcgaaaaagttggaaaaaAAAATATAAGAATCAAGTTTTTCGAGTTGAACGACGACAACGAAATTTGGGCAGCGTATGGCAGATTCTCCGAGTTAGATGTGCATCATCAATATGCTATAGCATTCAAAACACCAGCTTATATGGATCTAAATATAACTTCACCAAAAGAAGTATTTATACAATTGGAAAGACCGTCAGATTTAGATTGTTCGGAACCCGTAAAATTTACGTACAAGCCAAGTGACAAGATAGTAATGGGCCGAAAACGGCAACGCATGTCGTACTCAGGAAGCGCGGAATTATCGCACATTATGGCGAGCTATAACTCTTTACCACAAGACGAAATATTGTCAACGTCAAATAACGATAGTCGAGAATTGTCGAAAGAATTGAAACGAATATTCTCTCAAGGCTGCTCATCTACCGAACTACTAAGCTTCGCCGAACACATCGATTTTGACAaatatattaaatttcttgaCGATAGTGATGAAAACATGTTAACGGCTGATGGCGGCTCAAGGCAACAGTATCAAGATGACGTAGACTTTGCGAAAAATATCCTTGTCGAAGGAATAGGATATATGAAACTTAATCCAAAAAGTGGTAAAGAAGCTTTACGGAAATTACTAAAGGAACGTTCATCCTATGGCGATTCAGCGATTCATTCGGCTCTCAGATACGATCAGAGAGATATTGCTAAATACATTCTTATGTTAGTGAGCGCGAATGAAGATTGCAGTGCTCTTGTAAACGAGCAGAATAGTTCTGGAAAAACTCCTTTACATTACGCTGTCTTACAAAATCAACCAGAGATGACGAAAACGTTACTTATGCTCGGCGCAGATCCGACTAAATGCGACGATCATGGATTTTCGCCGTTGCACACTGTCGTAAAAATTCCTGGCACAAGAACTTGCATTGGCATCCTCTTATCGAaggaaaatatcaatttagaAGCCTATACTGATTCCGGTTGGACTGCATTACAATTAGCTGCGGAAGCTGGCTCATACGATGCTGTTCGTTTGCTCGTACAAGCTGGCGCGAATGTGAATAATACTGATATGTCGCATGGTCGAACAGCACTTCACATTGCCGTTGAAAATGGACATAAAGATATCGTCCAATTTTTACTCGAAGAGACTGACATAGATGTCAACAAGAAAAATTTTAGTGGATACACGGCGTTGCACAGTGCGGTTGTATACACAGGATCCCGAGCAGAAGAGTTGTGTATGTTACTAAGAAAACACGGTGCAAATACTGAAATACAGAGTTCTGTTGAAGAACCAGAAAACATTGAacaagcaaaagaagaagtcAATGTGACGGTGAAGATCGAACAAGATTCCGAAGAAGAAGTGAAAGAGGAGCAAACTTCAAGACAGTCTTCGTTTGATTTAGCATCGAATAATCCAGACGTTTTAAGAATGCTTTCGAATCCAGTGACCGATATCGAATCTACTGCGGAAATTTCAGCGAAAGACGAAGCCATAGAAATAGATTCACAGACAAATTGGTTGAGTTCGGAGGATAAAAAGAACTTGTCCGAAATTCTTGATAAAACAAAAGGATGGAAGAAGTTAGCTGTGCGCTTGAATTTCGATTGTTTGTTACGGACTTTCGAGCAGAGTACGTCGAGTCCTTCGTTActtcttttaaattatattgacGTACAGTCAACTATGTCACTTATTGAGCTTGAGAATATCTTGAGAAATCTGGATGAAAATGAGGCAGCCGATTGTGTCATGCATGTTATAAGCGCGCAATCGTGA
- Protein Sequence
- MSELCETRIGLSGGFFDNPAYLSGGYGMVPSSSQGSYSPFSGSSVSQEARIPSPGSMSHSPLHGTDYIMLNNATVIGEPFISIVEQPIDKFRFRYKSEMIGTHGSLVGASSGPNRKKQAPTVQLHNYSDKAIIRCTLVTSEDGKRIPHAHRLVRREGNEDVDDPHHVEVSLETGYTASFHGMGIIHTAKKHIKGELVRKMRNEALEKVKRRNINESLTVREEAQILADAESYQKCVNLNSVSLCFQAFILDYNKIMTPITDPVYSNPINNLKSALTGELKICRIDKNTGSCEGGEEVFIFVEKVGKKNIRIKFFELNDDNEIWAAYGRFSELDVHHQYAIAFKTPAYMDLNITSPKEVFIQLERPSDLDCSEPVKFTYKPSDKIVMGRKRQRMSYSGSAELSHIMASYNSLPQDEILSTSNNDSRELSKELKRIFSQGCSSTELLSFAEHIDFDKYIKFLDDSDENMLTADGGSRQQYQDDVDFAKNILVEGIGYMKLNPKSGKEALRKLLKERSSYGDSAIHSALRYDQRDIAKYILMLVSANEDCSALVNEQNSSGKTPLHYAVLQNQPEMTKTLLMLGADPTKCDDHGFSPLHTVVKIPGTRTCIGILLSKENINLEAYTDSGWTALQLAAEAGSYDAVRLLVQAGANVNNTDMSHGRTALHIAVENGHKDIVQFLLEETDIDVNKKNFSGYTALHSAVVYTGSRAEELCMLLRKHGANTEIQSSVEEPENIEQAKEEVNVTVKIEQDSEEEVKEEQTSRQSSFDLASNNPDVLRMLSNPVTDIESTAEISAKDEAIEIDSQTNWLSSEDKKNLSEILDKTKGWKKLAVRLNFDCLLRTFEQSTSSPSLLLLNYIDVQSTMSLIELENILRNLDENEAADCVMHVISAQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -