Tatt007873.1
Basic Information
- Insect
- Trypoxylon attenuatum
- Gene Symbol
- Usf1_3
- Assembly
- GCA_963989405.1
- Location
- OZ022490.1:25362516-25364254[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.097 6.3e+02 0.7 0.0 11 38 139 167 138 170 0.80 2 3 0.77 5e+03 -2.1 0.0 22 33 198 209 197 211 0.79 3 3 1.4e-07 0.00094 19.4 0.3 17 46 217 246 214 248 0.95
Sequence Information
- Coding Sequence
- ATGGACATTTTGGAGCAGCATCTCGAGCAGCAGGACGTCAGCGCCATCAACGCGAAGGAGGATAATGGGACCGGTATCGTTATCGAGGAAGCAGAGATCGTCGACTGCGAAGGAGAACCTGTCGTGGAAGATGGCATGCGTTACCAAGAGACTCTGGCGTACAGAGTGGTACAGGTGAACGGTGGTGGAAGCAGTGGCAGCGAAATCGAGCTACCTGTTTCCCAGCAAAGCAATAATGCGGTACAGGTCTTGACGTCGCCTATCAATGGACAGTTTTATGTGATTGGGAATGCTAACGACGTGTTCACTACGGCGCAGACTTCAAGGTCCTTGGTGCCGAGGACTACCACATTGCAGATTGAGACTTCGAGGAATTATTCGAGCGGATTGAAAAAGAGGGATGACAGAAGGAGAGCGACGCACAATGAGGTGGAGAGACGGCGCAGGGAtaagataaataattggatTGCGAAATTGGGGAAGATCATTCCTGAGTGCAATGGGACTGCGAATGGAGTTAGCGGGACTGGAGAAGGGAAAGCCAATTATGAAACACAGAGCAAAGGTGGGATCCTCGCGAAGGCGTGCGAATACATAACCGAGCTGCGAGAAGCGAACCATGGGCTGGGGCAGTGCCTCCGCGACAACGAGAAGCTCCGCCAGGAGATCACCGCGTTGAAACAACTCGTCACGCAGCTGAAACGCGAAAACTTCGTCCTCAGGTCCCAAATCTCGCCGTCGTCTGGCACCAATAACGATGTCGTGCATTTGAGTCCGTAA
- Protein Sequence
- MDILEQHLEQQDVSAINAKEDNGTGIVIEEAEIVDCEGEPVVEDGMRYQETLAYRVVQVNGGGSSGSEIELPVSQQSNNAVQVLTSPINGQFYVIGNANDVFTTAQTSRSLVPRTTTLQIETSRNYSSGLKKRDDRRRATHNEVERRRRDKINNWIAKLGKIIPECNGTANGVSGTGEGKANYETQSKGGILAKACEYITELREANHGLGQCLRDNEKLRQEITALKQLVTQLKRENFVLRSQISPSSGTNNDVVHLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01119990;
- 90% Identity
- iTF_01497907;
- 80% Identity
- iTF_01497907;