Tlin027304.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- grn
- Assembly
- GCA_949699805.1
- Location
- OX453051.1:11452499-11468481[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-17 1.5e-13 50.9 4.2 1 35 551 584 551 585 0.97 2 2 7.8e-18 3.1e-14 53.1 6.7 1 35 611 644 611 645 0.97
Sequence Information
- Coding Sequence
- ATGAGGCACGCAGCGACAGAGGACGCGATGAAGGAGAGCCTGTCAAAGCAGGAAATAAAGATGGAGTGGGAGGGTCGACGTCCGGGAGACAGTTCACCTCAGGTACCGCGAACTGCCGAAGAACAAGCAGGAGGTAGTCCTCAGAGTGTAATCACGACTAGAAGACATGTGAGGACTATAACGACCGCAGGACACATCACGGAATCCCTTGCCGACGCTGAGCCGGAATCGCCTGTACCTAGTCCACCTTCGGTTAAGCCGGCTGCCgctcataataacaataataacaacaacaataacaacaaagtTATGCAGCAAGTTATTCATCAGCAACAGCCGCAAGATTCTCAGTTGCGGCAGCAACAACACCAACAACAGCAAGTGCAGCAGgatcagcagcatcagcagcatcaacaacagcagcagcaggatCAGGAACAGGCTGCGCGATTCCAGGATAATCATCAGCAGCATTACATTCACATATCACAAGGAAACAGTCCGGAAGATCAACAAAGAGGAACCGATCAACCGCATCAACAACAAATTGTTTATGCAACGAGTAACGGTGAAGAAATGAGGCTGGCGAGTCAAGATTCGAGCGAAGGGACAATTACACTAGCAGTCAAGGAACCGACTCGGTACGAGACACCGGGACCAACGGACAGAGCGGAAGGTGAACGCGTTTACGTTTACGCGGAAGACGGTGGTGAAGTGAGACGCGCCGGTCACGTCATAACTCTGCAGTTACACGAACCAAGACGTcaccatcagcagcagcaacagcatcaTCAGCAGCATCAGCGATTCAGTCCACAGGAAAATGGCCACGTTACCAGGTATCAAGTCTCGCCTGTTGCACCGGCCGAAGAGTACGAACCCACGGCTATGGTCACTTCCCAAGCTGGAAACGTTCAACTCAGCTCGCCAGCGCCGACGTATTCGCCCCCGGTAGATGGCATCAGGACGACGCAGCACCAATTGGTCGCTACTGGCTATGCGGACAACGGAAACGCTACCATCAAGTACCAAACCGTCGCCGCTGTCCCTGCGGATTCTATAAAACCCAGCAGTACTTATACCACCCTCGAAACCGTCGCACTACCGACGGCGCAACCTGTTCAATACACTCAGTATGTCACCGACACGTATCAACACACCAGCAGCTTCACCTACGCAAAACCTGGAGAGATTGCTTACCACACATATCCAACCAGTCAATCTGGTAGCAGAGCTTCTGAGGTGGAGTCCCCTGCTGGAGTTTTTATCAAGAGCGATCCAACCCTGACATCTTCATCATTGTTGGTCCCAGGAAGAGCAGCACCGATTCATTATGAACAGCCAGGTTCGCCAGGTTCGCAGGTGACAATTTACGGTACAACGAGTGCGCCAACATTCCAATTTGTTAAATCAACCGCCGATCAATATTGGCACCCGGGCGGGTCAGTTTCACCGACGACTCTGGAATACGTGCCAGCATATTCGGGAATTTCGACGATTTCGACGAGCGACGCGGCCAATATGCTGTATTCCGGTGGCAACTACAGTGTCTCAGCTTCCGGTAACGGGTCACCCTCAACATGGCCGCTTCAGCTTGCCACTCCTGAGGAAACTTTTGAAGGTCAAGTCACTAATCCTGAATCCAAGGAGTGCGTTAATTGCGCAGCGAGTTTTACACCTTTGTGGCGTCGCGACGGAACTGGACATTATCTGTGCAACGCCTGTGGACTTTACAACAGGACAAATGGCTTGAACAGACCACCAATGAGATCCTGTGGGGGAAAAATGAAACACACTGTAGCACCAACCGGAAGAAGAACGGGGGTGCAATGTGCAAACTGCAGAACGAGCAACACAACGTTGTGGCGAAGGAATAACAACGGTGAACCAGTATGCAACGCCTGCGGTCTTTACTTTAAGCTCCACAATGTAAACAGGCCAATGAGCATGAAGAAGGAAGGCATACAGACAAGGAAAAGAAAACCCAAAAATCACTCTGGCATGGGAGGCGGAATTTCCGGGCCCAGTGGCAATCACAAGAGCGAGATCAAATCCAATCTACTGGTGGACCAGAAGCTGCAGTTGAACATGTTCACGAGCGGGGGTGGGAATGACGGGGGCGATGAACAACATTATCTAGGCACACTGACCACCGCACAAGTAGGACACGCACATTCTCCCCTTGCGTTACCCTCTGCCGCCGTTCTTAATCGACAGACAACCCTTACCGTGCCCCCTCTAGAGCCATTAACGAGTAGATCCGGCTCGGATACAGCAACAGTAATAACTTCGACAACAGCCGCCCACACCGACCGATCGTGA
- Protein Sequence
- MRHAATEDAMKESLSKQEIKMEWEGRRPGDSSPQVPRTAEEQAGGSPQSVITTRRHVRTITTAGHITESLADAEPESPVPSPPSVKPAAAHNNNNNNNNNNKVMQQVIHQQQPQDSQLRQQQHQQQQVQQDQQHQQHQQQQQQDQEQAARFQDNHQQHYIHISQGNSPEDQQRGTDQPHQQQIVYATSNGEEMRLASQDSSEGTITLAVKEPTRYETPGPTDRAEGERVYVYAEDGGEVRRAGHVITLQLHEPRRHHQQQQQHHQQHQRFSPQENGHVTRYQVSPVAPAEEYEPTAMVTSQAGNVQLSSPAPTYSPPVDGIRTTQHQLVATGYADNGNATIKYQTVAAVPADSIKPSSTYTTLETVALPTAQPVQYTQYVTDTYQHTSSFTYAKPGEIAYHTYPTSQSGSRASEVESPAGVFIKSDPTLTSSSLLVPGRAAPIHYEQPGSPGSQVTIYGTTSAPTFQFVKSTADQYWHPGGSVSPTTLEYVPAYSGISTISTSDAANMLYSGGNYSVSASGNGSPSTWPLQLATPEETFEGQVTNPESKECVNCAASFTPLWRRDGTGHYLCNACGLYNRTNGLNRPPMRSCGGKMKHTVAPTGRRTGVQCANCRTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPMSMKKEGIQTRKRKPKNHSGMGGGISGPSGNHKSEIKSNLLVDQKLQLNMFTSGGGNDGGDEQHYLGTLTTAQVGHAHSPLALPSAAVLNRQTTLTVPPLEPLTSRSGSDTATVITSTTAAHTDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00653263;
- 90% Identity
- iTF_00653263;
- 80% Identity
- -