Basic Information

Gene Symbol
gata6-a
Assembly
GCA_963970395.1
Location
OZ019970.1:29388481-29412131[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-17 1.9e-13 51.1 3.5 1 35 517 550 517 551 0.97
2 2 8.3e-18 4.6e-14 53.1 6.7 1 35 577 610 577 611 0.97

Sequence Information

Coding Sequence
ATGAAGGAGAGCCTGTCGAAGCAGGAAATAAAGATGGAGTGGGAGGGTCGTCGTCCGGGGGACAGTTCACCTCAGGTACCGCGAACCGCCGAGGAACAGGCAGGTGGTAGTCCTCAGAGTGTAATCACGACAAGAAGACATGTGAGAACAATAACGACTACAGGACACATTACGGAATCAATTGCCGATGCTGAGCCGGAATCACCAGTGCCCAGTCCACCCTCGATTAAGCAGGCTACTGGgcacaataacaacaacaataacaataatgacAACAAAGTAATGCATCAAGTGATTCATCAGCAACAGTCACAAGATTCTCAGTTgcggcagcagcaacaacaacaacaacaacaacagcagcagcaacaaCATTACATTCATATATCACAAGGAAATAGCCCGGAGGATCAACAAAGAGGAACCGATCAACCGCATCAACAGCAGATAGTTTATGCAACAAGTAACGGCGAAGAAATGCGTCTGACCAGTCAGGATTCAAGCGAAGGAACTATTACACTAGCAGTCAAGGAACCGACTCGGTACGAAACACCAGGACCAGCGGACAGAGCGGAAGACGAACGTGTCTATGTTTACGCGGAAGACGGTGGTGATGTGAGACGTGCCGGTCACGTCATAACCCTCCAGTTACACGAACACAGACGTCATCATCCGCAGCAACAACATCATCAGCAGCATCATCGATTTAGCCCACAGGAAAATGGTCAGGTGACCAGGTACCAAGTTTCACCAGTTACATCTGCCGAAGAGTACGAATCTACGGCGATGGTCACTTCGCAAGCTGGAACGGTCCAACTCAGTTCGCCAGCGCCGACGTATTCACCACCGGTAGATGCCATCAGAACGACCCAGCATCAATTGGTCGCAACTGGTTATACGGATAGTGGAAATGCTACCATCAAGTACGAAGCGGTTCCGGCTGTATCTGCAGATTCGATAAAACCTAGCAGTACTTATACTACCCTCGAAACTGTCGCACTAACATCGGCACAACCTGTTCAATACACTCAGTATGTCACCGACACATATCAACACACTAGCAGCTTTACCTACGCCAAACCTGGAGAGATTGGTTACCACACGTATCCAAGCAGTCAATCTGGTAGCAGGGGTTCTGAGGTGGAGTCCCCGGCTGGAGTGTTCATCAAGAGCGATCCAACCCTGACATCTTCATCCTTGCTGGTACCAGGAAGAGCAGGACCGATTCATTATGAACAACCTGGCTCGCCGGGTTCGCAGGTCACAATTTACAATACACCAACCGCGCCAACATTCCAATTTGTCAAATCAACGGGTGATCAGTATTGGCATCCGGGTGGATCAGTTTCACCAACGACTCTCGAATATGTACCAGCATATTCAGGAATACCGACGATTTCGACGAGCGACGCGGCCAGTATGTTATATTCCGGTGGGAACTACAGTGTCTCAGCTTCCGGTAACGGATCGCCTTCAACATGGCCGCTTCAACTTGCCAGTACCGAGGAAACTTTTGAGGGACAAGTCACTAATCCCGAATCCAAGGAGTGCGTAAATTGCGCAGCAAGTTTCACACCTTTGTGGCGTCGCGACGGAACAGGACATTATCTGTGCAACGCGTGCGGAATTTACAATAGGACAAATGGCCTGAACAGACCACCCATGAGATCTTGTGGGGGGAAGATGAAACACACAGTAGCACCGACCGGACGAAGAACGGGGGTGCAATGCGCAAACTGCAGAACAAGCAACACAACGCTGTGGCGAAGGAACAACAATGGAGAACCAGTATGCAATGCGTGCGGTCTTTACTTCAAACTCCACAATGTAAACAGGCCAATGAGTATGAAGAAGGAAGGCATACAGACAAGGAAAAGGAAACCCAAGAATCACTCGGGTATGGGAGGAGGAATTTCAGGACCCAGCGGGAATCACAAGAGCGAGATCAAAGCCAACCTACTCGTGGACTCGAAGCTGCAGTTGAACATGTTCACGAGCGGGGGTGGGAGTGACGGGGGTGAAGAACAACATTATCTAGGCACACTGACCACCGCACAATTAGGACACGCACATTCTCCCCTTGCGTTACCCTCCGCCGCCGTTCTAAATCGACAGACAACACTTACCGTGCCCCCTCTAGAGCCGTTAACGAGTAGATCCAGCTCGGATACAGCAACGGTAATAACTTCGACGACAGCCGCCCACACCGACCGATCGTGA
Protein Sequence
MKESLSKQEIKMEWEGRRPGDSSPQVPRTAEEQAGGSPQSVITTRRHVRTITTTGHITESIADAEPESPVPSPPSIKQATGHNNNNNNNNDNKVMHQVIHQQQSQDSQLRQQQQQQQQQQQQQQHYIHISQGNSPEDQQRGTDQPHQQQIVYATSNGEEMRLTSQDSSEGTITLAVKEPTRYETPGPADRAEDERVYVYAEDGGDVRRAGHVITLQLHEHRRHHPQQQHHQQHHRFSPQENGQVTRYQVSPVTSAEEYESTAMVTSQAGTVQLSSPAPTYSPPVDAIRTTQHQLVATGYTDSGNATIKYEAVPAVSADSIKPSSTYTTLETVALTSAQPVQYTQYVTDTYQHTSSFTYAKPGEIGYHTYPSSQSGSRGSEVESPAGVFIKSDPTLTSSSLLVPGRAGPIHYEQPGSPGSQVTIYNTPTAPTFQFVKSTGDQYWHPGGSVSPTTLEYVPAYSGIPTISTSDAASMLYSGGNYSVSASGNGSPSTWPLQLASTEETFEGQVTNPESKECVNCAASFTPLWRRDGTGHYLCNACGIYNRTNGLNRPPMRSCGGKMKHTVAPTGRRTGVQCANCRTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPMSMKKEGIQTRKRKPKNHSGMGGGISGPSGNHKSEIKANLLVDSKLQLNMFTSGGGSDGGEEQHYLGTLTTAQLGHAHSPLALPSAAVLNRQTTLTVPPLEPLTSRSSSDTATVITSTTAAHTDRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00343542; iTF_01497871;
80% Identity
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