Tlin005915.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- MAZ
- Assembly
- GCA_949699805.1
- Location
- OX453036.1:17127645-17131555[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00016 0.02 16.1 1.2 2 23 146 167 145 167 0.96 2 18 4.7e-05 0.006 17.8 0.5 1 23 173 195 173 195 0.96 3 18 0.27 35 5.9 3.6 1 23 202 225 202 225 0.92 4 18 7.2e-07 9.2e-05 23.5 2.2 1 23 231 253 231 253 0.98 5 18 0.94 1.2e+02 4.2 3.9 2 20 259 277 258 281 0.82 6 18 1.6e-05 0.0021 19.2 2.5 1 23 288 310 288 310 0.95 7 18 2.4e-07 3.1e-05 24.9 0.9 1 23 314 336 314 336 0.99 8 18 0.032 4.2 8.8 1.1 1 23 342 364 342 364 0.94 9 18 5e-06 0.00065 20.8 0.6 1 23 370 392 370 392 0.99 10 18 0.0018 0.23 12.8 3.8 1 23 584 606 584 606 0.98 11 18 1.4e-05 0.0018 19.4 4.3 1 23 612 635 612 635 0.97 12 18 0.046 5.9 8.3 4.2 1 23 642 665 642 665 0.94 13 18 2e-05 0.0026 18.9 0.3 1 23 671 693 671 693 0.97 14 18 0.0015 0.2 13.0 0.2 2 23 699 721 698 721 0.92 15 18 4.8e-06 0.00061 20.9 3.6 1 23 728 750 728 750 0.98 16 18 6.4e-06 0.00083 20.5 1.5 1 23 754 776 754 776 0.98 17 18 1.7e-05 0.0022 19.1 0.1 1 23 781 803 781 803 0.96 18 18 8.6e-06 0.0011 20.1 0.4 1 23 809 832 809 832 0.97
Sequence Information
- Coding Sequence
- ATGTATGTGAAATGCCGAATTATTCGACGAAAATTTGCGCTAATATACGAAGCATGTATTGTCGTgtacaATCCGCTAGACCCACTGGGTCCAGCGTTTCTGACGGTAAAGTTAGGCGACGATTACTTTCGTATGCCAAAGTCTCTGAGCTTCTTCATGATGAAGCAGCCGCAGCCCGACGAGGAAATTCCGCAAGTTGTTCCGGATGAGGTGCCGGAAGAGTCGTTAAACACAGAGGAAAATGATCTCGAGAAGATTGTAAAGAAGACACGATCATCGCGATCGGAAAAGGCGAAAAGAAATCCGGAAGTTAAAAGAAGTCCGGAGCCCAAAAGAGAGTATCCTTCGATGGACGACGATTTCGACGACGTGGATGACGTTCCCTTGGATTTCAGGCAGTACAAGGCGACGCACAGTGGCACGAAAAAGTCTCTAACCTGCGAAATTTGCTATTTGATCTTCGATCGCAAGAGCAAACTCACAAGCCACATGTTTAAACACAGCGATTCAAGACCGCACATTTGCACAATATGCTCAAAAGGCTTCAAGACCGGAGCGTATCTCGCAAGACACATGGAAATACACGACGACACTGTGCAGGAGCACGCCTGCACTCTCTGCGACTTCAAAGCTCGCACGAAGCCCTATCTCAAAATTCATCACATAAGAAAACACACGGACGACTACAACTTCAAGTGTCAAGAGTGCGGCAAGAGATTCAAAGTTCAGTCGGACTATACGACGCACATGAAGGATCACGACACCGAATCTTGTGTGTGCGACATATGCGGCTCGTCATATCCCAGCAAGAGTTCGCTCTATTTTCACAAACACTATAAACACAAAACGAAGGTCAAGGAGTTTGAATGCACGACCTGCAAGAAACGTTTCAAGAGCCAGAAGAATCTCAACACTCATGCCGAGCTTCATAAGATGAAGTATGTTTGCGAACAGTGCGGAATGGAGTTCAAATCTAAATACGGCCTCACCAAACATCTCAGGACGCATTCGGGCGAAAAATCCTATTTATGTGCCATTTGCGGGAAAACATTTGGCTGTCTTAGTTCCCAGAAAATTCATCTCCTTACTCATGTCGGTGAACGACCTTATGTATGCGATATCTGCGGACAGAGCTTCACTCAGAGATCACCGATGATGCTGCATCGACGGAAACATCCGGGGATGCATCCTCCACCGCCGCCCATCAAAATAACCAATCTCCTGCATGGCGTGCAGgacaaaataattgttaataagAATCCCCagaGAAACCGCCGGAGAATGTTTGGGAACGCAGCCAACCAAGCATCAGGAGTAAAATGGTGGGAAATTTGCGACGAAAGAAGAAGCGCGCGGGGAAAACGGAGCGAATTGGAAAGTAAAAAGAAGAAGActgacaaaaagaaaaaatcagtaCCACCGACAAAACAGAAGAGCAAACAACGATCTGTTAAAACCAAAAGAAAAGTCGCCGCAGTCGACAAAAATGCTGATAATGATTCTACCGCTGACGAGGAAAATTCATCGAAGAAGCAGAAGATTGCCCGTCGAACGCGGAAACCACCAGCTAAGAaaggatcgaaaaaaaagtatagagaCACTTCCCAGGACTTCGAAGTCGATTCCGACAAAGAGCCCTCGAAATTCGTCGAGATAACGATTAAGGAAGAGGTCGAGGAGGATAGTTCGCGGGATTGGCTGGATTCCGACGACGGGGGACCTAAATCCGTGGAAATAACGAAGAAGAGCTACGACTGTCGAACTTGCGGAGCTTCTTACAAACGTCGCTGTCTCTACAACAAACATTTGTTAACACACAGCAATTTGCGACCGTACGAATGCCCAACGTGCCATAAAAAGTTTAAGTACAACTTTGGTCTCACCAGGCACATAAAACAGCAGCACAGTGATGTCGCGCCTCATTACACGTGCAAAATGTGCGAATTCACCACCAAACACGAGTATTATCTTCAAATCCATTTTGCACGTAAACACACCGAAGAGACTAAGTACAAGTGCAACATTTGTGGCAAAACGTTCAAGGTTGTTGGGCCGTACAGAGTGCATATGAATGACCACGAAAATGGGCCACAAGTTTGCGATATTTGCGGAATTTCCTATCCGAACAAAACTTCTCTGTATGATCATAGATATTACAAGCACATGGAGAAAAATCACCCTTTTCAATGCACAGTTTGCAAGAAACATTTCTCGACTGAGAAGAATCTCGAGACTCACATGGAGCAGCACAATCAAACTTACGTTTGTGAAGAAtgcggaaaaaaatttgctaaaaaaCCATGCCTCGCGAAACACCGAAAAGtgcatcgagaaaaaatgtatctttgtCCTGTTTGCGGTCGCGCTTTCGCGAATAAAACTACTCAGAGAGTTCACATGATCACACATTCCGGAGTGAGACCATATATTTGTGACGTCTGCGGTCTAAATTTCACTCAAAGATCGTCGTTGATGATTCACTGGAAAAAAACACACCCGGAAGCCAGTCAAGCACCGCCGCCCGTTACGCTCCGAAATATTGTCCAGGCGACCAATCCGAATGCTAACTAA
- Protein Sequence
- MYVKCRIIRRKFALIYEACIVVYNPLDPLGPAFLTVKLGDDYFRMPKSLSFFMMKQPQPDEEIPQVVPDEVPEESLNTEENDLEKIVKKTRSSRSEKAKRNPEVKRSPEPKREYPSMDDDFDDVDDVPLDFRQYKATHSGTKKSLTCEICYLIFDRKSKLTSHMFKHSDSRPHICTICSKGFKTGAYLARHMEIHDDTVQEHACTLCDFKARTKPYLKIHHIRKHTDDYNFKCQECGKRFKVQSDYTTHMKDHDTESCVCDICGSSYPSKSSLYFHKHYKHKTKVKEFECTTCKKRFKSQKNLNTHAELHKMKYVCEQCGMEFKSKYGLTKHLRTHSGEKSYLCAICGKTFGCLSSQKIHLLTHVGERPYVCDICGQSFTQRSPMMLHRRKHPGMHPPPPPIKITNLLHGVQDKIIVNKNPQRNRRRMFGNAANQASGVKWWEICDERRSARGKRSELESKKKKTDKKKKSVPPTKQKSKQRSVKTKRKVAAVDKNADNDSTADEENSSKKQKIARRTRKPPAKKGSKKKYRDTSQDFEVDSDKEPSKFVEITIKEEVEEDSSRDWLDSDDGGPKSVEITKKSYDCRTCGASYKRRCLYNKHLLTHSNLRPYECPTCHKKFKYNFGLTRHIKQQHSDVAPHYTCKMCEFTTKHEYYLQIHFARKHTEETKYKCNICGKTFKVVGPYRVHMNDHENGPQVCDICGISYPNKTSLYDHRYYKHMEKNHPFQCTVCKKHFSTEKNLETHMEQHNQTYVCEECGKKFAKKPCLAKHRKVHREKMYLCPVCGRAFANKTTQRVHMITHSGVRPYICDVCGLNFTQRSSLMIHWKKTHPEASQAPPPVTLRNIVQATNPNAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01207548;
- 90% Identity
- -
- 80% Identity
- -