Basic Information

Insect: Tromatobia lineatoria
Gene Symbol: ZNF236
Assembly: GCA_949699805.1
Location: OX453048.1:213216-221004[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00025 0.032 15.5 0.9 2 23 53 74 53 74 0.97

2 24 1.3e-07 1.7e-05 25.7 1.5 1 23 93 115 93 115 0.99

3 24 3.2e-05 0.0041 18.3 0.6 1 20 121 140 121 143 0.96

4 24 6.1e-05 0.0079 17.4 0.3 3 23 151 172 149 172 0.96

5 24 0.0023 0.3 12.4 5.2 1 23 181 204 181 204 0.98

6 24 1.9e-06 0.00025 22.1 1.9 1 23 319 341 319 341 0.98

7 24 0.00012 0.016 16.5 1.6 1 23 347 369 347 369 0.99

8 24 0.0078 1 10.8 3.5 1 23 375 397 375 397 0.98

9 24 3.5e-05 0.0045 18.1 1.9 1 23 401 423 401 423 0.98

10 24 0.00033 0.043 15.1 3.6 1 23 478 500 478 500 0.98

11 24 5.1e-06 0.00066 20.8 3.4 1 23 506 528 506 528 0.99

12 24 4.9e-05 0.0063 17.7 0.4 1 23 534 556 534 556 0.97

13 24 0.0001 0.013 16.7 7.2 1 23 562 584 562 584 0.98

14 24 1.1e-05 0.0014 19.8 1.8 1 23 897 919 897 919 0.97

15 24 0.22 28 6.2 2.8 2 23 945 966 944 966 0.95

16 24 8.5e-05 0.011 16.9 2.4 1 23 972 994 972 994 0.99

17 24 0.022 2.8 9.3 0.1 2 23 1001 1022 1000 1022 0.96

18 24 1.4e-07 1.8e-05 25.7 1.3 2 23 1102 1123 1102 1123 0.98

19 24 0.048 6.2 8.3 5.5 1 23 1129 1151 1129 1151 0.98

20 24 0.0011 0.14 13.4 3.9 1 23 1157 1179 1157 1179 0.97

21 24 0.00029 0.037 15.3 2.2 1 23 1185 1207 1185 1207 0.98

22 24 0.00022 0.028 15.6 1.5 2 23 1433 1454 1433 1454 0.97

23 24 1.2e-05 0.0015 19.7 4.2 1 23 1460 1482 1460 1482 0.98

24 24 6e-07 7.7e-05 23.7 3.0 1 23 1488 1511 1488 1511 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00025	0.032	15.5	0.9	2	23	53	74	53	74	0.97
2	24	1.3e-07	1.7e-05	25.7	1.5	1	23	93	115	93	115	0.99
3	24	3.2e-05	0.0041	18.3	0.6	1	20	121	140	121	143	0.96
4	24	6.1e-05	0.0079	17.4	0.3	3	23	151	172	149	172	0.96
5	24	0.0023	0.3	12.4	5.2	1	23	181	204	181	204	0.98
6	24	1.9e-06	0.00025	22.1	1.9	1	23	319	341	319	341	0.98
7	24	0.00012	0.016	16.5	1.6	1	23	347	369	347	369	0.99
8	24	0.0078	1	10.8	3.5	1	23	375	397	375	397	0.98
9	24	3.5e-05	0.0045	18.1	1.9	1	23	401	423	401	423	0.98
10	24	0.00033	0.043	15.1	3.6	1	23	478	500	478	500	0.98
11	24	5.1e-06	0.00066	20.8	3.4	1	23	506	528	506	528	0.99
12	24	4.9e-05	0.0063	17.7	0.4	1	23	534	556	534	556	0.97
13	24	0.0001	0.013	16.7	7.2	1	23	562	584	562	584	0.98
14	24	1.1e-05	0.0014	19.8	1.8	1	23	897	919	897	919	0.97
15	24	0.22	28	6.2	2.8	2	23	945	966	944	966	0.95
16	24	8.5e-05	0.011	16.9	2.4	1	23	972	994	972	994	0.99
17	24	0.022	2.8	9.3	0.1	2	23	1001	1022	1000	1022	0.96
18	24	1.4e-07	1.8e-05	25.7	1.3	2	23	1102	1123	1102	1123	0.98
19	24	0.048	6.2	8.3	5.5	1	23	1129	1151	1129	1151	0.98
20	24	0.0011	0.14	13.4	3.9	1	23	1157	1179	1157	1179	0.97
21	24	0.00029	0.037	15.3	2.2	1	23	1185	1207	1185	1207	0.98
22	24	0.00022	0.028	15.6	1.5	2	23	1433	1454	1433	1454	0.97
23	24	1.2e-05	0.0015	19.7	4.2	1	23	1460	1482	1460	1482	0.98
24	24	6e-07	7.7e-05	23.7	3.0	1	23	1488	1511	1488	1511	0.96

Sequence Information

Coding Sequence: ATGACACTCGCCGTCGATTGCGTGAATTTCGCTATCCTACTCATTTGCTCCCGGGTATTTCACTTTGCGCTGGGTTTGAGCGCTCAATATTACAAGGCGCAGCTTGACGCACATCTGAAGCTTCATAATGAAAAGTGGTCGACCGAAGATGTGAGAAAATGTAGACTCTGCAATAAGCAATTCACACAACCCGCTCTTTATCGTCTACATATTAGGGAACATTATAGAACTAAGATAGTGAAACAGACGAAAAGAGGGACAAACCACAAAACAATGTACAAGTGCAAGATATGTTCAAAATCCTTCCAAAAACCGAGTCAATTGATGCGCCACATTAGGGTGCACACCGGAGAGAAGCCCTTCAAGTGTACGGTTTGTACTCGAGCGTTCACGCAGAAGGGATCTTTACAAATTCACATGTGGCAACATATCGGAGTTCGCCCCTACGGCTGTAATTTTTGCAACGCTAAATTTAGTCAGAAAGgTAATTTGAACGCTCACATCTTGAGGGTCCACAATGCACCGGAAGGCGAGCCTATTTACAGCTGCTCGCATTGTACTTGTGTATTCAAGAAGTTGGGCAGTCTCAACGGACACATGAAGAAAATGCACTCAAATCCCATGGAGGAAACACCGCAAAAATGTGATAGCTCAACAGAGGCTGACCTTCAGGCAACCGTTGACACCGTGATGTCCCAATTGGCATCACTCGACGCCAGTATAAAGAACCCAGCGGATTCTACGGATTGCGGACTGTCAATGACGTCCGAATGTGATATACTTCAGCAGGCTCTGAAAAACAGTGGCTTAGACAGCAAAGGAAAAACTACTGAGGCTTCGATGAATAAAGCCGATGCCCAAACGTCTTTTGTGACGCTCTTAGATAGAGCACCGGACGGTTCACTGAgAAGGTATCTCACGATAAAACAGCGGTGTATCGGAAGCGTCAGGTGGTATGCTTGTTCTTTTTGTCACAAGGAATTCAAGAAGCCCTCGGATCTTATAAGACACTTACGTGTACACACGCAGGAAAAGCCCTTTAAGTGTTCATATTGCTATCGATCGTTCGCTCTAAAGTCAACGATGATAGCTCACGAGAGAACGCATAATTGCACGAAAAAGTATGCATGCAGTAGCTGCGACAAGACATTCGCTTGCCACAGTAGCCTTATAGCGCATTCGCGCACCCACGTGAAGCCTCACAAGTGCAACATATGTGACAAATCTTTTGGTACAATCGCCCTACTGAAAAGTCACACAAAGAGTCATACGAAGAGCAAATCGAAGATATCGCCAGAAGCCGAAGTTCTCGTACCCCAAATAGTTCTCGAGGAACCGTTGATAATCAGCGATGCGGGAAATAAAATTAGCGTTGCCCATGTTCAGTCAAAACAGAAGCAGATCTACGACAGCGCCGACGTTGCGAGACCTCACAAATGTTGGGTTTGTCCGGCAGCGTTCAGGAAAATAAGCCATCTGAAACAACACTATCGAAGGCATACTGGCGAAAGACCCTACCAATGTCCAAAATGCGATAGGAGGTTCACATCAAATAGCGTTCTCAAATCGCATCTTCACACCCACGATGAGTCGAGACCTTTCAGTTGCGCAGTTTGTGATGCAACATTTTCCACGCTTAGTAGTATGAAGCGGCATTTGGTTACTCACAGCAACAAAAGGCCATTTATGTGTCCTTATTGTCATAAGACGTTCAAGACCTCTGTCAACTGTCGAAAACATATGAAGATACATAAAACTGAGCTAGCGCAACAGCAACTGGAGCAACAAAGAACGCAGCAAAATGAGCAACTCTCGCCGATCAAGGAGGGACAAGTGATGCCGGAAATAGCAGAAAATCTCACGCTTCCCGAAGACATGACAGTGACGTTTCAATCGCAACAAGCAGCCACTGACTTCACCCGTGCATTCAACGATCCATTTCAGGATATTTCCGGGGAAAAGGAGAAATCTTTCATGGCCGATGATGGAATTACTCAGACAATTGACAATCAGACTTTACCCGTGGTAGATACCGATAACTTAGGAGCATCCCAGACCTTGCATGCCGATGCAACGGGCACTATTACGCTACCTAACTACTCCGGAGATCAAACACTCACGCCAGAGAGTATACGAGAGATCGAGGAAACTTTGAACCAGCAATTGTTTAATATCGGAATGAACGACCCGAATTCGGGATCTCTAACATCAAGGGGACAGCcagtattgaatattatttatgaaaacgGCAAGCCCTTGGATTCTGCCAATAATACCTCCATCAACGCCAGCATATTTCCCTCGCACTTCGACACCTTCGATATGAGTCATATTACTCTGCAGGCTGATACGGAGATCGATATGGGAATAAATCCGGCGAATTCAACGAGTATGGCGAGTATTCTGCCGCGGTCAGCGCAAGAAGAACAACGTCTCGTTCCCGTGACGACCGGCAATAACGCCGATGACTCTCCAAACAAATCGGCACGGCATTTGATGGTCGTCAGTTCTATGCGAACATGTCCTGAGCTATCAAGGCCTGTTCAGGCATGCCCCAAGTATCCGAAAGTTATAGCGAAAGCCGACACGACCAATGGCACAGATATTCTTAACAACACCGACGGTGAATCGACCGAACCAAAACCGGTAATTGCGTCGTCGCCTGTTGCGGAACCAGATGAAGTACTATTTCCATGTCACGTGTGCAACAAACGATTTAAAAATCAGAATCTTCTCGAAGCTCATGGAAAATCTCACTCCCTCGCTGAACCGTTATCGCTGATGACTGTAAACGAGACATCCACGATCGTTCCGGAGCCTCAATCGTTGCTACAATGCCATATGTGTAGTCAAAAAGGATTTACCATGGAAACGCTAAAGAATCACTTAAGCACACATCGAGGAGCAAAAGAATTTCAATGTACCGAATGTTCCGCACGATTTTGCACGAACGGTGGACTAAGCAGACACTTGAAGATGCACGCGAACAAACAACAATGGAATTGCTCCGTGTGCTTGGAGTCGTTGCCAAACGAGGCGCAATTAAAGTTACATATAAAAATGCACGAAGATATGGGCTGGAATGGTTGCTCGATAGAACCGGACAGTTCGCAGGGTGAGCCAATAACGATGGATGCCTCCGAGTTTTTGAGTGTAACAGTGGCGGCGGGAAGTGAGCCCCAACGAGCAGATGTGGGCTCGGTATCGGAAAAGGTGTTACTAGACAGTGTAGCTGAACGCGAAATACTGAATCGTTTGTGCGGAAATTCTGATTTcacgaaagaaaagaaagaatacACAAATAGATGTAAATATTGTCCAAAAACGTTTCGTAAGCCAAGCGATCTTATACGGCACGTTCGAACGCATACGGGTGAAAAGCCTTATCAATGTGAGTTCTGTAACAAAAGTTTCGCGGTGAAATGTACTCTTGATTGTCATATGAAAGTTCATACTGGCAAAAAAACCTTTTGCTGTCACGTGTGTAACAGTTTATTTGCGACGAAAGGTAGTCTCAAGGTTCACATGCGTTTGCACACTGGTTCCAAGCCGTTCAGGTGTCCGATGTGCGATCTACGATTCAGAACCTCGGGACATAGGAAAGTTCACGAATTAACGCATATGAGAGGTCATAAAGGCGGTTCTAAGAATAAGCCGAAGCAACTTAAAATCGCGGCTATAGCAGGTGTCGTCGCGGAGGTGGAAAAGACTATTGAGAATTCTAATATCCAAAATTCTCCTACAGTATCATCGAACGAACAACAGTGTGCGCCACAATTACCATCACTAGATACTATTTCAATGGACCCCAGTGGAATTACAGATCACCAAATAACTTTTAACGCTGACGGAACTATTTTAAACAACAATTCGATGCTCTCTGTCAGCGAGAGCAATCAACTTGTCGCAAATCTTCACTTTTTGCTCGCCAACGGCCTCGTCACTATTCAAACCGACGAATGTCTCCTCCCGATATCGGCAAATAACGATTTCGACGCCACTCAAAACGAAGCTGTAGTCGCTAGTCTCGTAGTAGCGCCAACGAATAATTCACAGCAACAGGAAGAGATGACCTTCAATAGAGATTCCCCAGAAAATTTGGTTATCGCGACACAAATACCGAGTCTTACGATTAATCAACCCGAGGAACAGCAACTTGCGACTGTGCCTCTGAATAATTGTATGACTCTAATGGAAATGAGCGCTCCGAATTCCGTGCAAGAAGTGAAAGTTCAGCTTCAAGCGCAACACCAAAGTCCCAAGCAAATTTCGGGCAAAACGTCCAACTCGAAGAGAGAATGCGATATTTGCGGTAAGACGTTTATGAAGCCGTGCCAAGTTGAAAGACACAAGCGTATCCACACCGGCGAACGGCCGTACAAGTGCGAATTGTGCTCAAAGTCATTTGCTCAGAAATCAACTCTGCAAATGCATCAAAAGCACCACACAGGCGATCGACCTCATCCCTGTCCTCACTGCGATTACTCATTCACCCAGAAAGGCAATCTTCAGACACATCTCAAGCGAGCTCATCAACTCGACACGTTGGAGGTGAAAAAACTCAGACGCGGACATCAACAAATTCTGAGTGCAAGGATTACGCCGGAATATCTCGATGAGCCTCGAATATTGAACTTCGATGACATATCCTTTGTGGAAtttctcaaataa
Protein Sequence: MTLAVDCVNFAILLICSRVFHFALGLSAQYYKAQLDAHLKLHNEKWSTEDVRKCRLCNKQFTQPALYRLHIREHYRTKIVKQTKRGTNHKTMYKCKICSKSFQKPSQLMRHIRVHTGEKPFKCTVCTRAFTQKGSLQIHMWQHIGVRPYGCNFCNAKFSQKGNLNAHILRVHNAPEGEPIYSCSHCTCVFKKLGSLNGHMKKMHSNPMEETPQKCDSSTEADLQATVDTVMSQLASLDASIKNPADSTDCGLSMTSECDILQQALKNSGLDSKGKTTEASMNKADAQTSFVTLLDRAPDGSLRRYLTIKQRCIGSVRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCSYCYRSFALKSTMIAHERTHNCTKKYACSSCDKTFACHSSLIAHSRTHVKPHKCNICDKSFGTIALLKSHTKSHTKSKSKISPEAEVLVPQIVLEEPLIISDAGNKISVAHVQSKQKQIYDSADVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYQCPKCDRRFTSNSVLKSHLHTHDESRPFSCAVCDATFSTLSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKTELAQQQLEQQRTQQNEQLSPIKEGQVMPEIAENLTLPEDMTVTFQSQQAATDFTRAFNDPFQDISGEKEKSFMADDGITQTIDNQTLPVVDTDNLGASQTLHADATGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNDPNSGSLTSRGQPVLNIIYENGKPLDSANNTSINASIFPSHFDTFDMSHITLQADTEIDMGINPANSTSMASILPRSAQEEQRLVPVTTGNNADDSPNKSARHLMVVSSMRTCPELSRPVQACPKYPKVIAKADTTNGTDILNNTDGESTEPKPVIASSPVAEPDEVLFPCHVCNKRFKNQNLLEAHGKSHSLAEPLSLMTVNETSTIVPEPQSLLQCHMCSQKGFTMETLKNHLSTHRGAKEFQCTECSARFCTNGGLSRHLKMHANKQQWNCSVCLESLPNEAQLKLHIKMHEDMGWNGCSIEPDSSQGEPITMDASEFLSVTVAAGSEPQRADVGSVSEKVLLDSVAEREILNRLCGNSDFTKEKKEYTNRCKYCPKTFRKPSDLIRHVRTHTGEKPYQCEFCNKSFAVKCTLDCHMKVHTGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFRCPMCDLRFRTSGHRKVHELTHMRGHKGGSKNKPKQLKIAAIAGVVAEVEKTIENSNIQNSPTVSSNEQQCAPQLPSLDTISMDPSGITDHQITFNADGTILNNNSMLSVSESNQLVANLHFLLANGLVTIQTDECLLPISANNDFDATQNEAVVASLVVAPTNNSQQQEEMTFNRDSPENLVIATQIPSLTINQPEEQQLATVPLNNCMTLMEMSAPNSVQEVKVQLQAQHQSPKQISGKTSNSKRECDICGKTFMKPCQVERHKRIHTGERPYKCELCSKSFAQKSTLQMHQKHHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQLDTLEVKKLRRGHQQILSARITPEYLDEPRILNFDDISFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01207545;
90% Identity: iTF_00653019;
80% Identity: -