Pruf011789.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pimpla rufipes
Gene Symbol
ZNF236
Assembly
GCA_963932165.1
Location
OZ010636.1:16784221-16790730[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.00027 0.023 15.4 0.9 2 23 53 74 53 74 0.97
2 24 1.5e-07 1.3e-05 25.7 1.5 1 23 93 115 93 115 0.99
3 24 3.5e-05 0.003 18.2 0.6 1 20 121 140 121 143 0.96
4 24 0.00025 0.021 15.6 0.2 3 23 151 172 149 172 0.96
5 24 0.0024 0.21 12.5 5.4 1 23 181 204 181 204 0.98
6 24 2.1e-06 0.00018 22.1 1.9 1 23 319 341 319 341 0.98
7 24 0.00025 0.021 15.5 1.8 1 23 347 369 347 369 0.99
8 24 0.021 1.8 9.5 3.4 1 23 375 397 375 397 0.98
9 24 0.00079 0.068 14.0 2.7 1 21 401 421 401 423 0.94
10 24 0.00036 0.031 15.0 3.6 1 23 478 500 478 500 0.98
11 24 6.9e-06 0.00059 20.4 3.8 1 23 506 528 506 528 0.99
12 24 6.1e-05 0.0052 17.5 1.0 1 23 534 556 534 556 0.98
13 24 0.00011 0.0095 16.6 7.2 1 23 562 584 562 584 0.98
14 24 1e-05 0.00086 19.9 0.4 1 23 896 918 896 918 0.97
15 24 0.27 23 6.0 2.2 2 23 944 965 943 965 0.95
16 24 2.2e-05 0.0019 18.9 2.0 1 23 971 993 971 993 0.99
17 24 0.055 4.7 8.2 0.1 2 23 1000 1021 999 1021 0.96
18 24 5.7e-07 4.9e-05 23.9 1.6 2 23 1117 1138 1116 1138 0.98
19 24 0.053 4.5 8.2 5.5 1 23 1144 1166 1144 1166 0.98
20 24 0.0012 0.1 13.4 3.9 1 23 1172 1194 1172 1194 0.97
21 24 0.00031 0.027 15.2 2.2 1 23 1200 1222 1200 1222 0.98
22 24 0.0012 0.1 13.4 1.2 2 23 1471 1492 1470 1492 0.97
23 24 2.5e-05 0.0021 18.7 3.3 1 23 1498 1520 1498 1520 0.98
24 24 6.5e-07 5.6e-05 23.7 3.0 1 23 1526 1549 1526 1549 0.96

Sequence Information

Coding Sequence
ATGACACTCGCCGTCGATTGCGTGAATTTCGCTATTCTGCTCATTTGCTCCCGAGTATTTCACTTTGCGCTCGGTCTGAGCGCTCAATATTACAAGGCACAACTGGACGCCCATCTGAAGCTTCACAATGAAAAGTGGTCGACCGAGGATGTGCGGAAGTGCAGATTGTGCAACAAACAGTTCACACAACCGGCGCTTTATCGCCTGCACATTAGAGAACATTACAGAACTAAGATAGTGAAACAGACGAAGAGGGGAACCAGCCACAAGACGATGTACAAGTGCAAGATATGCTcgaaatcttttcaaaaaccGAGTCAATTGATGCGCCACATCAGGGTGCACACGGGAGAGAAGCCCTTCAAGTGTACGGTCTGCACCCGGGCATTCACGCAGAAGGGATCCCTGCAGATTCACATGTGGCAGCACATCGGGGTTCGTCCCTACGGTTGCGAGTTCTGCAGCGCTAAATTTAGTCAGAAAGGTAATTTGAACGCTCACATCTTGAGGGTGCACAACGCGCCGGAGGGCGAGCCTATTTACAGCTGCACGCACTGTACGTGCGTGTTCAAGAAATTGGGCAGTCTCAACGGTCACATGAAGAAAATGCACTCCAATCCGCCCGAGGAAGCACCGCAAAAATGTGATAGCTCAACCGAGGCCGACATGCAAGCCACCGTTGACACTGTGATGTCGCAGTTAGCATCTCTCGACGCGAGCGTAAAGAATCCCGCGGATTCCACGGATCCGGGACTGACGACGACTCCGGAGGGCGATATTCTGCAGCAGGCGCTGAAAAATAGCGGCCTGGAGAGCAAAGGAAAGAATTCCGCAGGGACGAACAAGAAGGTCGACGCGCAAACATCTTTCGTCACGCTTTTGGACAGAGCACCAGACGGTTCATTGAGGAGGTACCTGACGATCAAACAGCGATGCATCGGAAACATAAGATGGTACGCTTGTTCCTTCTGCCACAAGGAATTCAAGAAGCCGTCGGATCTCATAAGACACTTGCGTGTCCACACGCAAGAAAAACCTTTCAAGTGTTCATATTGCTATCGATCGTTCGCTCTAAAATCCACGATGTTGGCCCACGAGAGAACACACACGGGGCGGAAGATCTACGCATGCACCACCTGCGACACGAATTTCGCCTGTCACAGCAGCCTCGTGGCGCACACGCGAACCCACGCGAAGCCCCACAAGTGCGCGATTTGCGACAAATCGTTCGGCACGAGTGGGATGCTGAAGAGCCACGCGCGGTGTCATGCAAAGGGAAAATCGAAGATCTCGCCGGAGGCCGAGGTTCTCGTGCCCCAGATTGTGCTCGAGGAGCCGCTGATAATCAGCGACGCGGGAAACAAGATAAGCGTCGCCCACGTGCAGTCGAAGCAGAAGCAGATCTACGACAGCGCGGACGTCGCGAGGCCGCACAAGTGTTGGGTCTGCCCGGCGGCGTTTCGGAAAATCAGCCACCTGAAGCAACACTATCGAAGACACACGGGCGAAAGACCTTACAAATGTCCAAAGTGCGACAGGAGGTTCACCTCGAACAGCGTCCTCAAATCGCATTTACACACGCACGACGAGTCGAGGCCCTACAGTTGCTCCGTTTGTAACGCGAAATTCTCCACGCTGAGCAGTATGAAGCGACACTTGGTCACTCACAGCAACAAGAGGCCCTTCATGTGCCCTTATTGTCACAAGACATTCAAGACGTCGGTGAATTGTCGAAAACACATGAAGATTCATAAAACTGAGCTGGCGCAACAGCAATTGGAGCAACAGAAAACGCAGCAGGATCCTCCGCTCTCGCCGATCAAGGAGCGACCGGCGATGCCGGTGTTGACGGAGAATCTTCAGCTCCCCGAGGACATGCGAGTGACGTTTCAGTCGCAGCAAGTGGCGCCCGACTTCGCCCGCGCGTTCAACGATCAGTTTCAGGACATCGCGGTGGAGAAGGAGAAGTCCTTTCTGGCGGACGGCGAGATAGCTCAGACAATTGACAATCAGACTTTACCCGTGGTAGATAGCGATAACTTAGGAACATCCCAGACCTTGCATGCCGACGAAACGGGCACTATTACGCTACCTAACTACTCCGGAGATCAAACACTCACGCCAGAGAGTATTCGGGAGATCGAGGAAACCCTGAACCAGCAACTGTTCAACATCGGAATGGCGGACCCGAATACGGGTTCCCTCGAGTCGCGGGACCAGCCAgtattgaatattatttatGACAACGGGAAGGGCCTGGATCCCGCCAACAGCGGCTCCATTAACGCTAACATATTCCCCTCGCACTTCGATACCTTCGACATGAGTCACATCACTCTGCAGACGGACACTGAAATCGACATGGGAATAAGTTCGGCGAATTCGACGAGCATGGCGAGTATCCTGCCGCGATCAGCGCAGGAGGAGCAACGTCTCGTGCCCGTCACGACCTGCGGCAGCACCGAGGAGTCGCCGAACAAGTCCGCTCGGCATTTGATGGTCGTGAGCTCGATGCAAACCTGCCCCGAGCTCTCCAGGCCGGTTCAGGCGTGTCCGAAGTATCCGAAGGTCATAGCGAAAGCCGACACAACGGACGTCACGGAAATACTTAACAACGACGGCGAGGCGAGCGAACAAAAATTGGCGCCCTCGCCGACGGTCGTTTCGCAACCGGAAGTAGCGGCTTTCGCaTGTCCCCTGTGCGACAAACGCTTCAAAAGTTCGAAACTCCTCGAAGCTCACGGAAAGTCTCACGCGCTGAGCGATCCGGTGCCGCTGATCGATGCCATCGAAACTTCGACAATCCTTCTCGAGCCCGAATCGTTGCTGCAGTGTCACATGTGCAGTCAGAAGGGATTCACGATGGAGACGCTCAAGATCCACCTGAGCACCCATCGCGGAGCGAAAGAATTTCAATGTACCGAGTGTCCCCTGAGATTCTGCACGAACGGCGGCCTGAGCAGACACCTAAAAATGCACGCGAGTAAACAACAATGGAATTGCTCAATCTGCCTCGAGTCGCTGCCGAACGAGGCGCAACTGAAGCTGCACACGAAAATCCACTCGGAGATCGGATGGAGCGCGTGTCCGATAGAGCCCGACAGTTCGCAGAAGGAGCCGATAATGATAGACGCGTCGGACTTTCTGACGGTGACGGTGAcgggtggcggcggtggcggcggtggcggcggtggcagcggtggcggtggcggtaaCGAGCCACAGACGCAAGAGGCCTCGTCGGTATCGGAAAAAGTATTGCTCGACAGCGTAGCTGAGCGCGAGTTGCTCAGTCGATTGTGCGGCTCGGCGGAATTGTCAACGAAGGAGAAAAAGGAGTACACGAATAAGTGCAAATTCTGCCCGAAAACGTTCAGAAAGCCGAGCGACCTGATAAGACACGTGCGAACTCACACGGGGGAGCGTCCCTACCAGTGCGAGTTCTGCAATAAGAGTTTCGCGGTGAAATGCACCCTGGATTGTCACATGAAGGTTCACACGGGAAAGAAGACATTTTGCTGCCACGTGTGCAACAGTCTGTTCGCGACGAAGGGCAGCCTGAAAGTCCACATGCGTTTGCACACCGGTAGCAAGCCCTTCAGGTGTCCGATGTGCGATCTGCGCTTCAGAACCTCGGGACACCGGAAAGTTCACGAACTGACGCACACGCGCGAGCAGAAGGGCGGCGCGAGGTCGAAACCGAAGCAACTGAAGGTAGCGGCGATCGCGGGAGTCGTGGCGGAGGTGGAGAAGACCGTCGAGGCGTCGAGCAACGCGGCCGCGGCGTCTCTGaaccaacagcagcagcaacagcagcaacagcagcagcagcagcaacaacagcagcgacAACCAGCGGCGGCAGAATTTCCGGCTCTGGACACGATATCGATCGACGCAAGCGGAATAGCCGATCATCAGATAACATTCAACGCCGACGGGACGATACTCAACAACAACTCGATGCTCTCGATAAACGAGAGCAACCAGCTCGTGGCGAATCTTCACTTTCTGCTCGCCAACGGACTCGTGACTATTCAAACGGACGAGTCGCTTCTGCCGCAAGCGGCGAGCAACGACGTCGACGTTGTCAACGTCAACGACGAGAGTGCAATCGCCGGGCTCGTGGCAACGACGAACAACAATTTGGAGCAGCAGGAGGTGAATTTTGGTGGAAACGCGGCGGATAATttggttatcgcgacgcagaTGCCGGATCTTGCGGCGAATCGAgtcgaggagcagcagcagcagcagcagcagcagcagcagcaaacggTGCAGTTGAATAATTGCATGACTCTCGTGCAAATGGAAGCTCCGAGCACCGAGCAGGACGCGAAAGTTCAGGCTGAAGCGCAGCAACAAACGCGCAAACAAGTTTCCGGCAAGTCGTGCAACTCGAAGAAAGAGTGCGACGTCTGCGGCAAGATATTCATGAAGCCGTGCCAGGTCGAGAGGCACAAGCGAATTCACACGGGCGAACGGCCGTACAAGTGCGAGTTGTGCTCCAAGTCCTTCGCGCAGAAAGCCACTCTGCAGATGCACCAAAAGCACCACACGGGCGACCGACCTCATCCCTGTCCGCACTGCGACTACTCGTTCACGCAGAAGGGAAATCTTCAGACGCACCTCAAGCGGGCGCATCAGCTCGACACGCTCGAGGTGAAGAAGCTCAGACGCGGACAGCAAATTCTGAGCGCGAAACTCACGCCCGAGTATCTCGACGAGGGCAGAATACTCAACTTCGACGACATCTCGTTCGTCGAGTTTCTCAAGTAA
Protein Sequence
MTLAVDCVNFAILLICSRVFHFALGLSAQYYKAQLDAHLKLHNEKWSTEDVRKCRLCNKQFTQPALYRLHIREHYRTKIVKQTKRGTSHKTMYKCKICSKSFQKPSQLMRHIRVHTGEKPFKCTVCTRAFTQKGSLQIHMWQHIGVRPYGCEFCSAKFSQKGNLNAHILRVHNAPEGEPIYSCTHCTCVFKKLGSLNGHMKKMHSNPPEEAPQKCDSSTEADMQATVDTVMSQLASLDASVKNPADSTDPGLTTTPEGDILQQALKNSGLESKGKNSAGTNKKVDAQTSFVTLLDRAPDGSLRRYLTIKQRCIGNIRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCSYCYRSFALKSTMLAHERTHTGRKIYACTTCDTNFACHSSLVAHTRTHAKPHKCAICDKSFGTSGMLKSHARCHAKGKSKISPEAEVLVPQIVLEEPLIISDAGNKISVAHVQSKQKQIYDSADVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCPKCDRRFTSNSVLKSHLHTHDESRPYSCSVCNAKFSTLSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKTELAQQQLEQQKTQQDPPLSPIKERPAMPVLTENLQLPEDMRVTFQSQQVAPDFARAFNDQFQDIAVEKEKSFLADGEIAQTIDNQTLPVVDSDNLGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMADPNTGSLESRDQPVLNIIYDNGKGLDPANSGSINANIFPSHFDTFDMSHITLQTDTEIDMGISSANSTSMASILPRSAQEEQRLVPVTTCGSTEESPNKSARHLMVVSSMQTCPELSRPVQACPKYPKVIAKADTTDVTEILNNDGEASEQKLAPSPTVVSQPEVAAFACPLCDKRFKSSKLLEAHGKSHALSDPVPLIDAIETSTILLEPESLLQCHMCSQKGFTMETLKIHLSTHRGAKEFQCTECPLRFCTNGGLSRHLKMHASKQQWNCSICLESLPNEAQLKLHTKIHSEIGWSACPIEPDSSQKEPIMIDASDFLTVTVTGGGGGGGGGGGSGGGGGNEPQTQEASSVSEKVLLDSVAERELLSRLCGSAELSTKEKKEYTNKCKFCPKTFRKPSDLIRHVRTHTGERPYQCEFCNKSFAVKCTLDCHMKVHTGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFRCPMCDLRFRTSGHRKVHELTHTREQKGGARSKPKQLKVAAIAGVVAEVEKTVEASSNAAAASLNQQQQQQQQQQQQQQQQQRQPAAAEFPALDTISIDASGIADHQITFNADGTILNNNSMLSINESNQLVANLHFLLANGLVTIQTDESLLPQAASNDVDVVNVNDESAIAGLVATTNNNLEQQEVNFGGNAADNLVIATQMPDLAANRVEEQQQQQQQQQQQTVQLNNCMTLVQMEAPSTEQDAKVQAEAQQQTRKQVSGKSCNSKKECDVCGKIFMKPCQVERHKRIHTGERPYKCELCSKSFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQLDTLEVKKLRRGQQILSAKLTPEYLDEGRILNFDDISFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01497634; iTF_00414490; iTF_00653019;
90% Identity
-
80% Identity
-