Basic Information

Insect: Tromatobia lineatoria
Gene Symbol: Hr39
Assembly: GCA_949699805.1
Location: OX453047.1:5413712-5422493[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.16 1.7e+03 -1.1 8.8 44 164 195 320 180 364 0.68

2 4 3 3.2e+04 -10.9 18.1 83 149 368 427 329 461 0.43

3 4 5.8e-08 0.00061 20.1 0.0 1 21 543 563 543 567 0.92

4 4 3.7e-72 3.9e-68 231.6 0.0 89 408 601 923 573 923 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.16	1.7e+03	-1.1	8.8	44	164	195	320	180	364	0.68
2	4	3	3.2e+04	-10.9	18.1	83	149	368	427	329	461	0.43
3	4	5.8e-08	0.00061	20.1	0.0	1	21	543	563	543	567	0.92
4	4	3.7e-72	3.9e-68	231.6	0.0	89	408	601	923	573	923	0.79

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGTTGGTGGCCTCCGGCGCAATCGTGGAAGTCATCCACCACCTCCTCGTCGTCGACCATTCCATCGTCTCGCACCCTCGACGCTGGCAAAAACGTTTCCGTCACGACGATCAACGTACCACCGGCCCAGGAGATGCATGATGGTAAAAGCGTCTGCAAGTTCCTGGGGGGACAGAACGGCGTGACCGTATCGGTCGTCTCGAGTTGCGGCGGCGGTCCAGGTAGCGGAGGAGGCGGAGTCGGCGCGTCTTCCTCGTGTCCAGAGTCGAGTTCGTACGACGATCTTGAGGACAGCGACGGGGAAGTTAGCAAGATAGACTTTCGCGGTGTTAATCTGCGCACGAAGAAGAAGCGTGATGCCTCCGGTGGTACGGAAAACGATTGCGGCACCGTGGGCGCCGACAATCTTGAGCAGCAGCAGCCCGAGAGACCGATGTCATGGGAGGGCGAACTATCCGATCAGGAAATGTCTTCCAATACTATCACTAACCAGGACCACGAGGAGACCTCGATGGAAGGTGTTCAGGTATGTGGTGCGAGTCCGGGACCCCAGGAGCAAAAACTCCCGATAAAACCGGAGCCGGATTTTCGTTTGAGTCCGGGTCTCGCGCACGTTTCTCATAATGACGGGAATTTGCCATTGTCGCACGCGCAGCAGTtccagcatcaacaacaacagcaacagcagcgaggCATCGAGGGTCTCGAGCAAGCGCAACAGAGCGATTTGCCTTTGCTGGTCGGCAAGCTCCTCGGTGGTTACAACAGTTCAACGCCGAATCACAGTCCAATCCTGAATCCGCGGCATCATTTGACAAAGCACAGTCACACGAGATCTCAGGTTCCATCCCCAGATTCAGCGATCCATTCGGCCTACAGTGTATTCAGCTCGCCGACGCAGAGTCCACACGCGGCTCGTCATTCGGCTCTCGGAGCGGGAAGTCCGGTCCCTTCCTCGTCTCTTTCCCTGTCACGTCACAGTTTCAACAATTCCACATCTTCCCTCTCGCTCTCATTGTCGCACTCGTTGTCACGTAACAATTCCGACGCCTCAAGCAGTTGTTACAGCTACGGTTCCCTGAGTCCGCCGACGCATTCGCCCGTCCAGCAACCGAGACATTCGCACGCGCAGCATCATcaccaacaacagcagcagcaacagcatcagcaacagcaacaacagcatcaacaacacCACCAGCAGCAACAGGTCGCGCAGGGTAGTCCATTGCATCTGCCGTCAGTCTCGGCGACAAGCGCTCATCACTACTCCACTCCATGTCCTTCGGAACTCGGCTCCGAAGGACACCCGGAGGATCAGGAAGACTGCAAAATTCCCTCGGCGCCTTCGGGCATCTCCACAAGGCAACAACTCATCAACAGTCCCTGTCCCATATGCGGCGACAAAATAAGCGGTTTTCACTACGGAATATTCTCGTGCGAGTCGTGCAAGGGTTTCTTCAAGCGTACCGTGCAGAatcgcaagaattacgtgtgtCTGAGAGGCGCTGGTTGTCCGGTTACTGTAGCTACGAGAAAAAAGTGTCCGGCGTGTAGATTCGACAAGTGTCTCAATATGGGCATGAAACTCGAGGCGATTAGGGAGGACAGGACCCGCGGAGGCAGGAGTACCTATCAATGCACCTATACTTTACCCGCGAATCTCATCGGCAGTCCCGCAGGGGCTATTTCCGGTGAGAAAATGACCGGTGGCAACTGCAGCCCTGCTCCTCCTGGCTCTGAACATCATCATTCCGTTAGACATCACTGGAATCACTCGCACAAGATGCAAGCTGTGCCTCAGCTGCTTCAGGATATCATGGATGTGGAGCATCTCTGGCACTACAATGATAACGATCGAACGACCGGTGGAAGTCTGAACGCTGGGAGTTCGAGTCTCAGTGGTAACGGAGCGCAAATGCCCAACGAAATTCCCAGTGGACTTGGAGGAAGTATCTCCAGTACTGGCGGCGGAAACGCCGCAAGTAGCAACGGCAACCTTGACAACAGACCATCCGAACCCACGAGATCAAGCTCCGCTGGACCGGCTGGTAATCACGAGCATCACCAGCAACACTCGCCCACGAACAATCCTTCACCCACCACCAATTCCACTTGCAATCCCAATGGGAATTCTACTCAAAATCCCGATTTTTTGTCCAATCTTTGCAATATCGCCGATCACAGGTTGTACAAGATTGTCAAGTGGTGCAAGAGCTTGCCACTTTTCAAGAACATTTCCATAGACGATCAAATATGCTTGTTGATTAATTCCTGGTGCGAGTTACTCCTGTTTTCGTGCTGCTTTCGCAGCATGAGCACGCCTGGGGAAATCAGAGTGTCACTTGGGAAATCCATCACCCTCGAACAGGCGAGACAGCTTGGATTAGCCACGTGCATCGAAAGGATGCTTGCTTTCACAAATAATCTCAGGCGGCTCAGGGTTGATCAGTACGAATATGTCGCGATGAAGGTTATCGTATTGCTGACTTCGGATACGAGCGAACTAAAGGAGCCGGAGAAAGTGCGAGCTTCGCAGGAAAAGGCGCTGCAGGCACTTCAGCAGTATACGATCGCGAGGTATCCGGAAATGCCAGCGAAATTTGGCGAGCTTCTTTTGCGGATACCGGACCTGCAGAGAACTTGTCAAGCCGGCAAAGAGTTGCTCAGTGCAAAGCGCGCTGAGGGCGAGGGCAGCTCCTTCAATCTTTTGATGGAATTATTGCGGGGAGATCACTGA
Protein Sequence: MSEQNGPTEGPGWWPPAQSWKSSTTSSSSTIPSSRTLDAGKNVSVTTINVPPAQEMHDGKSVCKFLGGQNGVTVSVVSSCGGGPGSGGGGVGASSSCPESSSYDDLEDSDGEVSKIDFRGVNLRTKKKRDASGGTENDCGTVGADNLEQQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGPQEQKLPIKPEPDFRLSPGLAHVSHNDGNLPLSHAQQFQHQQQQQQQRGIEGLEQAQQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHAQHHHQQQQQQQHQQQQQQHQQHHQQQQVAQGSPLHLPSVSATSAHHYSTPCPSELGSEGHPEDQEDCKIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSPAGAISGEKMTGGNCSPAPPGSEHHHSVRHHWNHSHKMQAVPQLLQDIMDVEHLWHYNDNDRTTGGSLNAGSSSLSGNGAQMPNEIPSGLGGSISSTGGGNAASSNGNLDNRPSEPTRSSSAGPAGNHEHHQQHSPTNNPSPTTNSTCNPNGNSTQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059522;
90% Identity: iTF_01497451;
80% Identity: iTF_01497451;