Tlin000299.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- NCOR1
- Assembly
- GCA_949699805.1
- Location
- OX453034.1:2149364-2165047[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-09 5.7e-06 27.1 0.0 3 43 690 730 689 733 0.96
Sequence Information
- Coding Sequence
- ATGAATTCCTTCTGCAAGCAGCAGAACGCACTCGACTCGTCGAAAATTGTTCTCGTCTCGAGAATGAGCTCCACGACGGTCCGAGTGAAGACGGAGCGCTTCAGGTTCGGCGGTCTAGTCGTGCCTGCGTTTCAGGACGATCTGGCAACATTGCGGCATGCTCTCGGTATTGCGCTGCGTGGCACAAGCGCTTCGGAGACCCGTGAGTTTACGGAGTTTCCGAGCGGATGCGCGCGCGTTCCGCGACCGCGCAATACGCTCGGCCACGTGCCTCGAACTGCCGCTACTTTCGGTTGCGCATGCGCCAACAAACATTGCTGCCATGTTGCGCGAAGATACGATCCAATGGCGCTCCGCGGTGGCGCGCACCTCGCGCTCAACTCCGACTCTGATTGGCCGCTTCGGCCTACGCAAAGCTACATAAACATCAAGAGCAGCAGTCCGGTGTCTCCACGTACCGTTGGTGGGGGTAGCTACGTTCAAGGGGCCCCGGGAACTCCATCGGCAGGCGGTGCAGTGGGCCCGCCAGGCGGTGGAAGCGGCGCGGGGGCCACGGGGGCCGCAACTGGCACTGCCGTCGGCAATTACGTCACTGTGCCTGTTCCCAGTGGCCTCCGCTATGTTCACCCTTATCCGCCACCACCACCGGCACCATCGGCCCCCGTCAATCAGACGCCACCCCCGCCGGGAGCTACGGCGGCCTACACCAGGGACCCTTACAGAAATGCTACACCAAACGTAAACGAGAGGGTGGCAATAAGTGTGAGCAGCAGTCCGGTGTCGCAGGTGGGTGTCGGCGTCGGGGTCGGCGTCGGAGCCGGTGAATACGCGGTAAATAGCCGAGGGGACCGTCCACGAATATCCCTGCTTCCACCTGCCTCGATAGCTCCTGCGCCTTCGCCAACGGGACCGGAGTACCAAGTAGCATCAGCGCGAAATCCACGGGGCATTATGCCCATGCAAACGGAGCAGTACTGCAACCGGGGCGTCGAAATGGCAACCCTCCAGGAAGCCCCGCCTTTCAAGAAAATCCGACTTGGTCAGCCCCAAACGCAGCCACAGTGTCAAACAATTTCGCCAGCTGACACCTGCATTAAACAGGAACACGTGCAACAGTTGCAGCAACCACTTAGGATAGATACGCGGGAGCAGCCAGCGGCAGGTGCGTACACGCCACAGACCGAAGCCATCTCGCCTACACTACCGGAGCCTAGTACGCAGGAAGATGCCCAATTCAGAAGTACGAAGGACGATTTGCTGCAGCAAATTGCGAAAGTCGACAGGGAGATTGCGAAACGGGAATCGCAAATCAGTAAGCTCCGGAAAAAACTCAAGGAACTCGAGGAAACGGCTAGTAAACCCTTGGAGGCTGCCGGTCTCAAGCGACCCGTTGAGGAACAGTCGCAACCGGCGAAGCATCAGTCACTGGCGCAGAAGATCTATGCTGAGAACAGGAAAAAGGCGGAAGAGGCGCATCGGCTACTGGACAGGCTAGGTCCGAAGGTGGAGTTGCCATTGTACAATCAGCCTTCCGATACAAATGTCTATCAGGAGAATCGAACGAGGCATCAGTCTTGCATGCGAGCGAGGCTGGTTGCGAGGCTTCGAAGGGAGCATGCCGAGCGCGCGTCTCTTCATCGTCAGCAATCGCAAACTTACGCGATTCTCGTGCAGGAGTGGCACCGTAAGGTGGAGCGTCTCGAGGCTACGCAAAAGAGAAAGTCGAAGGAGACGAAGAATCGTGAGTTCTTCGAGAAGGTATTTCCCGAGCTGCGAAAACAGCGAGAGGATAAAGAACGATTCAACAGGGTCGGTGCTCGTATCAAGAGCGAAGCCGATCTCGAAGAAATCATGGATGGTCTTCAGGAGCAGGAGGAAGAAATGTCGACAgagttaaaaaattccattaaagcCCGCCAGATGGAGGACAAGAAGATGCGCTCATACGCAGTGATACCACCGCTGTTGTTGGACACGAAACAGAGGAGGATCGCATTCCAAAATCGGAATGGTCTGCTTCAGCCGGAAGAACTCATGGCACTGCACAGCGAGCGAAAATTGATCAATGTGTGGAGTCCGATGGAGCACGAGCTGTTCAAGGAAAAATACCTTCAGCATCCCAAGAACTTTGGAGCGATAGCTCAATCCCTAGAACACAAATCTGTTCCAGACTGCGTGCATCATTACTACCTCACTAAAAAAGCGGAAAATTATAAGCAGTTGTTGCGGAAATCGCGGCAACGCACGCGTAGCTCTCGAAACAATCCTAACAATAAGGTAAACAATAGTAACTCTACACTCGGAGCGATAGATATATTAACGACAGGCGTGACGACGAGGCTGCAGCGCGAGCAGCAACAAAAGACGCAGGAGAATCCTCAGAGCAGTTCGGCGACAACGTCGACAACTTCAacgacgacgtcgtcgtcgtcatcgtccaCAACGTCAACGGCATCGTCGACGAACGCGACGACGACGAATACCACCGCGACCACCACTGTCTCGACAACGAGCGCAACAACCTCGTCCGCCTCCACGGCCTCGATTGCCACGACGTCTTCGAGTTCGAATCCGTCAACGGAAACGACCGCCACGTCGACCACGACGAGTGCCGTATCCGTCCAGAGCACCACAACCTCGACTACCAGTGTTCTAACGACGTCCTCGACGTCTAGCGCCAAGGACGCCCGAGAAGCAAACAAGGAAAACAAAGAGAACAAAGGCGACTCCAAGGATTCACTTGTCAAGGATGTCAAGGAAGAGTCACAGTCGAGCTCGGAGACGGCTTCCGGAAAAGACTCGAAAGCCTCTACCGAAACCGCCGGCACCTTGTCATCCTGCTTAACAATTAGCGGGACGAACACTGCCTCATTACAAACGGATAAGGATAAAAAGAAGTCTGCGAGTGCGTCAGGTGGAGTAAGCAGCAGTAGGTCAAAGGAtaagaaaaaggaaaatcaCGCGACCCCAATGGAAACGAGTGACGAAGAAGCGCAAACGATCGACAACATCGGGATTGGTAGGTCTTTCAGTAACCATTTAACGAGACTCGTGATTCCCGTATGA
- Protein Sequence
- MNSFCKQQNALDSSKIVLVSRMSSTTVRVKTERFRFGGLVVPAFQDDLATLRHALGIALRGTSASETREFTEFPSGCARVPRPRNTLGHVPRTAATFGCACANKHCCHVARRYDPMALRGGAHLALNSDSDWPLRPTQSYINIKSSSPVSPRTVGGGSYVQGAPGTPSAGGAVGPPGGGSGAGATGAATGTAVGNYVTVPVPSGLRYVHPYPPPPPAPSAPVNQTPPPPGATAAYTRDPYRNATPNVNERVAISVSSSPVSQVGVGVGVGVGAGEYAVNSRGDRPRISLLPPASIAPAPSPTGPEYQVASARNPRGIMPMQTEQYCNRGVEMATLQEAPPFKKIRLGQPQTQPQCQTISPADTCIKQEHVQQLQQPLRIDTREQPAAGAYTPQTEAISPTLPEPSTQEDAQFRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEETASKPLEAAGLKRPVEEQSQPAKHQSLAQKIYAENRKKAEEAHRLLDRLGPKVELPLYNQPSDTNVYQENRTRHQSCMRARLVARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEEMSTELKNSIKARQMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELMALHSERKLINVWSPMEHELFKEKYLQHPKNFGAIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSNSTLGAIDILTTGVTTRLQREQQQKTQENPQSSSATTSTTSTTTSSSSSSTTSTASSTNATTTNTTATTTVSTTSATTSSASTASIATTSSSSNPSTETTATSTTTSAVSVQSTTTSTTSVLTTSSTSSAKDAREANKENKENKGDSKDSLVKDVKEESQSSSETASGKDSKASTETAGTLSSCLTISGTNTASLQTDKDKKKSASASGGVSSSRSKDKKKENHATPMETSDEEAQTIDNIGIGRSFSNHLTRLVIPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01364584;
- 90% Identity
- iTF_00059397;
- 80% Identity
- -