Basic Information

Gene Symbol
NCOR1
Assembly
GCA_933228735.2
Location
OW121688.1:18306271-18329650[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-09 3.1e-06 27.2 0.0 3 43 638 678 637 681 0.96

Sequence Information

Coding Sequence
ATGGAGACTGTGGGCAAGACAGTCCAGGTAGTGAGTGGACTGGGGGTCGGCGGTCCGGTGGGCCCTGTGGGCCCTGTGGGGGGAGATCtgcatcatcatcatcactccCACTCCCACGGGGGCCATGGCCACTCGCTGGTCGGCGCAGGGACGACCCCCGCCCGGGTTCAGGTCCAGAGCCATCAGGGCCAGCCTCCACCGCCCTCGCACAATCAGCATTTACCCGCGAGGTCCACCCCCGTACAGCTGCACAGgccTACCCAGAGCTACATAAACATCAAGAGCAGCAGTCCGGTGTCTCCGCGTACGGTTGGCGGGGGTTACGTGCAAGGGGCCCCAGGGACCCCGTCTGCAGGTGGCGCGGTGGGACCGCCGGGCGGAGGAAGCGGAGCGGGAGCCACGGGGGCAGCTACCGGCACTGCCTCCGGCAATTACGTCACCGTCCCCGTTCCCAGTGGTCTTCGCTATGTACACCCTTACCCGCCACCGCCTCCGGCACCATCGGCTCCCGTCAATCAGACGCCACCCCCGCCGGGAGCCACGGCGGCCTACACGAGGGACCCTTACAGAAACGCCACACCGAACgtaaACGAGAGGGTGGCGATAAGTGTGAGCAGCAGTCCGGTGTCGCAGGTGGGTGTCGGCGTCGGGGTCGGCGTCGGGGCTGGTGAATACGGCATCAATAGCCGAGGGGACCGTCCACGAATATCCCTGCTTCCACCTGCCTCGGTCGCCCCGGCGCCTTCGCCGACGGGACCCGAGTATCACGTTGCCGGTGCGCGAAATCCACGGGTGATGATGCCGATGCAGACCGATCAGTACTGCAGCCGGGCGGTCGAGATGGCGACGCTCCTCGAAGCGCCTCCCTTCAAGAAGATACGACTCGGCCAGCCTCAGTCACAGCCCCAGTGCCAGACGATTTCGCCGGCGGACACCTGCATAAAGCAGGATCACGTGCAGTTGCAACAGCCACTTAGGATAGATACGCGGGAGCAGCCGGCGGCAGGTGCGTACACCCCACAGACCGAAGCCATCTCGCCTACACTACCGGAGCCTAGCACGCAGGAGGATGCCCAATTCAGGAGCACCAAGGACGATTTGCTTCAGCAGATTGCGAAGGTCGATCGTGAGATTGCCAAGAGGGAATCGCAGATCAGCAAGCTCAGGAAGAAGCTTAAGGAACTCGAGGAAACGGCTAGCAAACCCCTTGAGGCTGGCGGTCTCAAACGACCGGTCGAGGAACAGTCGCAACCGGCGAAGCATCAGTCGCTGGCACAGAAGATCTATGCTGAGAACAGGAAAAAGGCGGAAGAGGCGCATCGGTTACTGGACAGGCTAGGTCCTAAGGTGGAGCTGCCGTTGTACAATCAGCCATCGGACACGAATGTCTATCAGGAGAATCGAACGAGGCATCAGTCTTGCATGCGAGCGAGGCTAGTCGCGAGGCTAAGGCGAGAGCACGCCGAGCGAGCTTCTCTTCATCGGCAGCAATCGCAGACTTACGCTATTCTCGTTCAGGAGTGGCATCGTAAGGTGGAACGTCTCGAGGCTACGCAAAAGAGAAAGTCGAAGGAGACGAAGAATCGTGAATTCTTCGAGAAAGTATTTCCCGAGCTGCGAAAACAGAGAGAGGATAAAGAAAGATTCAACAGGGTCGGGGCTCGTATCAAGAGCGAAGCCGATCTCGAAGAAATCATGGACGGTCTTCAGGAACAGGAGGAAGACATGTCGACAGagttaaaaaattccattaaagCCCGTCAGATGGAGGACAAGAAGATGCGCTCGTACGCGGTCATTCCACCCCTGTTGCTGGACACGAAACAGAGAAGGATCGCATTCCAAAATCGGAATGGTCTCCTGCAGCCGGAAGAGCTCGAGGCACTTCACAGCGAGCGAAAACTGATCAACGTGTGGAGTCCCATGGAGCATGAGCTGTTCAAGGAAAAATATCTTCAGCATCCCAAGAATTTCGGAGCTATAGCTCAATCCCTAGAACACAAATCTGTTCCGGACTGCGTGCATCATTACTACCTCACtaaaaaagctgaaaattatAAGCAGCTATTGCGGAAATCGCGACAACGAACGCGTAGCTCCCGAAACAATCCTAACAATAAGGTAAACAATAGTAACTCGACGCTCGGAGCGATAGATATATTAACGACAGGCGTTACGACGAGGCTGCAGCGTGAGCAGCAACAAAAGACCCAGGAGAATCCTCAGAGTAGCTCGGCGACGGCGTCGACAACTTCTACGACGTCTTCGTCCAcaacgtcgacgtcgtcgtcgacgacgatgacggcgACGAGCACGACAACGTCAACCAGCacctcgacgacgaccgcCGCAACATCGTCCACGTCGACGATTTCGGCGGtcacgacgtcgtcgagctcCCATCCGTCGACGGAGACGACGGCTACGTCGACCACGACCGGCGCCGCATCCGTCCAGAGCACCACCacaacgtcgacgacgagtgTTCTCACCACGTCTTCGACCTCCAGCGCGAAAGACGCGAGGGAAGCGAACAAGGAGAATAAAGAGAACAAAGGAGACTCTAAAGATTCGATCGTCAAGGAAGCGAAGGAGGAGTCGCAGTCGAGCTCGGAAACGGTTTCGGGAAAGGACTCGAAAGCGTCAACCGAAACAGCGGGCACCTTGTCGTCCTGCCTGAACATCAGCGGGACAAACACCGCGACTTCGCAGACGGACAAGGACAAGAAAAAATCGGGCAGCGTCTCGGGTGGCGTGAGCAGCAGTAGGACGAAGGACAAGAAGAAGGAGAATCACGCGACTCCCATGGAGACGAGCGACGAGGAAGCTCAGACGATCGACAACATCGGTGAGTACCGAAAAACACCGTCCTGCGTGGATAATCGTCGAATCGagaacttgaaattttacgTAATCGACGCACTCAACACTAACGAAGTGTGCCGATATCTTTGA
Protein Sequence
METVGKTVQVVSGLGVGGPVGPVGPVGGDLHHHHHSHSHGGHGHSLVGAGTTPARVQVQSHQGQPPPPSHNQHLPARSTPVQLHRPTQSYINIKSSSPVSPRTVGGGYVQGAPGTPSAGGAVGPPGGGSGAGATGAATGTASGNYVTVPVPSGLRYVHPYPPPPPAPSAPVNQTPPPPGATAAYTRDPYRNATPNVNERVAISVSSSPVSQVGVGVGVGVGAGEYGINSRGDRPRISLLPPASVAPAPSPTGPEYHVAGARNPRVMMPMQTDQYCSRAVEMATLLEAPPFKKIRLGQPQSQPQCQTISPADTCIKQDHVQLQQPLRIDTREQPAAGAYTPQTEAISPTLPEPSTQEDAQFRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEETASKPLEAGGLKRPVEEQSQPAKHQSLAQKIYAENRKKAEEAHRLLDRLGPKVELPLYNQPSDTNVYQENRTRHQSCMRARLVARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEDMSTELKNSIKARQMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSPMEHELFKEKYLQHPKNFGAIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSNSTLGAIDILTTGVTTRLQREQQQKTQENPQSSSATASTTSTTSSSTTSTSSSTTMTATSTTTSTSTSTTTAATSSTSTISAVTTSSSSHPSTETTATSTTTGAASVQSTTTTSTTSVLTTSSTSSAKDAREANKENKENKGDSKDSIVKEAKEESQSSSETVSGKDSKASTETAGTLSSCLNISGTNTATSQTDKDKKKSGSVSGGVSSSRTKDKKKENHATPMETSDEEAQTIDNIGEYRKTPSCVDNRRIENLKFYVIDALNTNEVCRYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2