Trha028823.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- GATA-B
- Assembly
- GCA_018246435.1
- Location
- DWLU01029339.1:244-2883[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.1 1.6e+04 -2.3 0.8 17 26 35 44 32 46 0.76 2 3 1.4e-17 5.4e-14 53.6 3.9 1 34 58 90 58 92 0.97 3 3 8.1e-19 3.2e-15 57.5 7.1 1 34 124 156 124 158 0.97
Sequence Information
- Coding Sequence
- ATGCGCGGCCGGAAACAACACATCCGCACTTCCGGTGGCAGCGTTAGGTCGGTGCACCGCGCTCGGAGTGACATGCGAGGTATCGGTTGCGGCGGCGGGAGGCCGGGCGCTGACGCGGTGTGTTGCGCATGCGCAGTCGACGTGGCCGAGTTTTACACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCGGTCGCCCCGCCCGCGCCCGACATGGGCACGAAGCGGCCGGGCATGTCGTGCAGCAACTGCCACACCACGACCACCTCGTTGTGGCGGCGTAACGCGCACGGCGAGACCGTCTGCAACGCGTGCGGCCTATACTACAAGCTGCACAACATCAACCGACCCCTCGCCATGAAGAAGGACTCGATACAGACTAGGAAACGAAAACCAAAGAATAGTATGAAAGGAGAAAGGAATCTCAGCAAAACCAGTTCACACGGCGTGCACGCGGCGCACGCGACGCACGCGACGCACGGCGCACACTCGGCGCACGGCGCGCACTCCGTGCCCTCAGCGGTGAAACTTGAAAGCTTATTGGACAACAGCGCGGGCGTGGGTAACGTGACCAACACGGGCAACGTGGGCAACGTGGGCAGCGCGGAGAGTCGCGCGGCGCTCGCGCTCGGCTACTACGTACAGCACGCCATCAAAATGGATGAGCCGCCGCCAGCGCACGCGCACGGGCACGCGCACTCGCACGCGCACTCGCACGCGCACTCGCACACGCTTGCTACGCACGCCACGCACGTCGTTCACGGCACGCATATGTACGAGGAGGAGTACCGGCGGGCGGAgggcggcgagcgcggcgcggcTGTCTCGCTGGCGAGCTGA
- Protein Sequence
- MRGRKQHIRTSGGSVRSVHRARSDMRGIGCGGGRPGADAVCCACAVDVAEFYTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAVAPPAPDMGTKRPGMSCSNCHTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSMKGERNLSKTSSHGVHAAHATHATHGAHSAHGAHSVPSAVKLESLLDNSAGVGNVTNTGNVGNVGSAESRAALALGYYVQHAIKMDEPPPAHAHGHAHSHAHSHAHSHTLATHATHVVHGTHMYEEEYRRAEGGERGAAVSLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00250124;
- 90% Identity
- iTF_01496198; iTF_01494738;
- 80% Identity
- -