Tobl001501.1
Basic Information
- Insect
- Troides oblongomaculatus
- Gene Symbol
- GATA-B
- Assembly
- GCA_029032895.1
- Location
- JARDWC010000086.1:154627-157212[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4 4.6e+03 -2.2 0.8 17 26 11 20 8 22 0.76 2 3 4.7e-18 1.5e-14 53.8 3.9 1 34 34 66 34 68 0.97 3 3 2.7e-19 8.9e-16 57.7 7.1 1 34 100 132 100 134 0.97
Sequence Information
- Coding Sequence
- ATGCGAGGTATCGGTTGCGGCGGCGGGAGGCCGGGCGCTGACGCGGTGTGTTGCGCATGCGCAGTCGACGTGGCCGAGTTTTACACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCGGTCGCCCCGCCCGCGCCCGACATGGGCACGAAGCGGCCGGGCATGTCGTGCAGCAACTGCCACACCACGACCACCTCGCTGTGGCGGCGCAACGCGCACGGCGAGACCGTCTGCAACGCGTGCGGCCTGTACTACAAGCTGCACAACATCAACCGACCCCTCGCCATGAAGAAGGACTCGATACAGACTAGGAAACGAAAACCAAAGAATAGTATGAAAGGAGAAAGGAATCTCAGCAAAACCAGTTCGCACGGCgtgcacgcggcgcacgcggcgcacgcgacGCACGGCGCACACGCGGCGCACGGCGCGCACTCCGTGCCCTCAGCGGTGAAACTTGAAAGCTTATTGGACAACAGCGCGGGCGTGGGTAACGTGACCAACACGGGCAACGTGGGCAACGTGGGCAGCGCGGAGAGTCGCGCGGCGCTCGCGCTCGGCTACTACGTACAGCACGCCATCAAGATGGACGAGCCGCCGccagcgcacgcgcacgcgcacgcgcactcgcacGCGCACTCGCACGCGCTTGCGAcgcacgccgcgcacgccgcTCACGGCACGCACATGTACGAGGAGGAGTACCGGCGGGCGGAgggcggcgagcgcggcgcggcCGTCTCGCTGGCGAGCTGA
- Protein Sequence
- MRGIGCGGGRPGADAVCCACAVDVAEFYTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAVAPPAPDMGTKRPGMSCSNCHTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSMKGERNLSKTSSHGVHAAHAAHATHGAHAAHGAHSVPSAVKLESLLDNSAGVGNVTNTGNVGNVGSAESRAALALGYYVQHAIKMDEPPPAHAHAHAHSHAHSHALATHAAHAAHGTHMYEEEYRRAEGGERGAAVSLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00250124;
- 90% Identity
- iTF_01497034;
- 80% Identity
- -