Trha033640.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- pnr
- Assembly
- GCA_018246435.1
- Location
- DWLU01041119.1:2-2266[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 4.1e-13 50.8 3.3 1 35 146 179 146 180 0.97 2 2 7.6e-18 3e-14 54.4 7.5 1 35 207 240 207 241 0.97
Sequence Information
- Coding Sequence
- GCGGCCGGCGGCAAGGAGCTGCTGACGCTGTACGGCGGCGTGGCGGCGGGTGCGCGGGGCGACGAGTCGCCGCCCGGCCAGCTGCTGTACCGCAGCGACCCCACGCTCTCATCCTCCTCGCTGAATTCGCGCGCTGCCCACGTGGTGTACGGCTCCGTGGTGCCACAGACGCAGGCCGTGTACGATGCGCCACCCAGCCCGAATTCCCAGCAAGTGACTCTGTACACGCACGGGAACACGGTACAGTACAAGGTGGGGGGCGAGCACTACCTCGGGCAAGGAGCGGGAGTGGAGTACGTGCCAGTGTCGGGGTACGAGGGCGGGCTGCTCGTGGAGGGTTACGCGGCGCCCGCGCAGGCCTGGTCCGCGCACAACCTGCTGCCGATCGAGGATGGCTTCGATCCCAACATGGCGGGCATGGGCGAGGTGAAGGAGTGCGTCAACTGCGCGGCCGCCACCACGCCGCTGTGGCGCCGCGACGGCACCGGGCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAACGGCGTCAACCGGCCGCCGCTCAAGGGGCAGAAGGCGAAACCGCAACAGGCGCTGCCCACCAACGGCAACCGGCGCGTGGGCGTGACGTGCGCCAACTGCCGCACCTCCAACACCACGCTGTGGCGGCGCAACAACAACGGCGAGCCGGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGGAAGCGGAAGCCCAAGAGCATGGGCGGCGGGCACGGCGTGCCCCGGGCGGGCGGCGGACTGGCAGCGGAGGCACACTCGCACAAGGTGCTGCCGCCGCTGTATGCTGCCGTGGAGGGCGCGGCGGgcccgctgctgctgctgcccgcCGCGCGCCACCCGAGCGACGCGTGA
- Protein Sequence
- AAGGKELLTLYGGVAAGARGDESPPGQLLYRSDPTLSSSSLNSRAAHVVYGSVVPQTQAVYDAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGAGVEYVPVSGYEGGLLVEGYAAPAQAWSAHNLLPIEDGFDPNMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGVPRAGGGLAAEAHSHKVLPPLYAAVEGAAGPLLLLPAARHPSDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01130476;
- 90% Identity
- iTF_01130476;
- 80% Identity
- -