Pkot029577.1
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- pnr
- Assembly
- GCA_018246255.1
- Location
- DWLS01038767.1:1-1566[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-17 1.2e-13 51.2 3.3 1 35 125 158 125 159 0.97 2 2 1.9e-18 8.4e-15 54.8 7.5 1 35 186 219 186 220 0.97
Sequence Information
- Coding Sequence
- GACTCGCCCCCGGGCCAGCTGCTCTACCGCAGCGACCCCACGCTCTCCTCCTCCTCGCTGAGCTCGCGCGCGGCGCACGTCGTCTACGGCTCCGTGGTGCCGCAGACGCAGGCGGTGTACGAGGCGCCGCCCAGCCCCAACTCGCAGCAGGTGACGCTGTACACCCACGGGAACACTGTTCAGTACAAGGTGGGCGGGGAGCACTACCTCGGTCAGGGTGCGGGCGTGGAGTACGTGCCGGTGTCGGGGTACGAGGGGGGGCTGCTCGTGGAGAGTTACGCGGCGCCCGCGCAGGCCTGGCCCGCGCACAACCTGCTGCCCATAGACGACGGATTCGATCCAGGTATGGCCGGTATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCCGCGACCACCCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAACGGGGTCAACCGGCCGCCGCTCAAAGGCCAGAAGGCGAAGCCGCAGCAGGCACTGCCCACCAACGGCAACCGTCGCGTGGGTGTGACCTGCGCCAACTGCCGCACCTCCAACACGACGCTGTGGCGGCGCAACAACAACGGGGAGCCGGTCTGCAACGCGTGCGGACTCTACTACAAACTGCACAACGTGAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGCAAGAGGAAACCGAAGAGTATGGGCGGCGGGCACGGAGTGGGGCGGGCGGGCGGCGCGCTGCCCGGTGAGTAC
- Protein Sequence
- DSPPGQLLYRSDPTLSSSSLSSRAAHVVYGSVVPQTQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGAGVEYVPVSGYEGGLLVESYAAPAQAWPAHNLLPIDDGFDPGMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGVGRAGGALPGEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01497033;
- 90% Identity
- iTF_01497033;
- 80% Identity
- -