Trha064820.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- -
- Assembly
- GCA_018246435.1
- Location
- DWLU01136800.1:2-552[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.24 3.3e+03 -0.4 0.0 140 266 55 75 40 96 0.54 2 2 5.1e-19 7e-15 57.5 0.2 2 68 114 180 113 183 0.94
Sequence Information
- Coding Sequence
- CTGGAGGTTCCCAATGTGCTCAAGTCGTTGATCGATGCCACGGGGAAGGAACAGAGAGTGATCACCTCAACTGCCGGCCTGATGACCCCCATGCCATTCGTCAACCAGGGAGAAGGGGAGTCGCTGAAGATCGCGCAACGGGCGCGCCATGACCTGGAGGCTTTCGCAGACGAATGGAAGGGATTAACAGAACGAAAGAGCTTCATCGAACTGGAAGAAGCGCAGATAGTGGAACAACTCGACACTCAGCAGCTACGAGCCGATCAGCTTACCGAGTTGATTACTGCCGTTGGGGCGCTGGAGATCTTCCAAGACGACAGCAACGTCCGCAGAAAGTTCGATGAAGTGACCGACAAACTCGAATCGTTGGAAATGAAATTCCGAAATGAAATACTGGAGTACCGACTACCTGAGACAGCGGTAGCCGCCATACATCCTCTCTTCCGTGACGCCATGGAAGAATGGGAGCCTCTCAAAGAACCGACATTCCTCGTATCCCATCTTCGCCGCCTCCAACCTTTACTCTCTCGAAAAAGGAACAACGAAGAAG
- Protein Sequence
- LEVPNVLKSLIDATGKEQRVITSTAGLMTPMPFVNQGEGESLKIAQRARHDLEAFADEWKGLTERKSFIELEEAQIVEQLDTQQLRADQLTELITAVGALEIFQDDSNVRRKFDEVTDKLESLEMKFRNEILEYRLPETAVAAIHPLFRDAMEEWEPLKEPTFLVSHLRRLQPLLSRKRNNEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -