Trha008074.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- retn
- Assembly
- GCA_018246435.1
- Location
- DWLU01001326.1:1-6498[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-20 6.8e-16 60.6 0.0 17 89 57 127 41 127 0.94 2 2 8 6e+04 -3.4 0.0 25 38 246 259 233 261 0.71
Sequence Information
- Coding Sequence
- atgcgatttGGCACGTTTGGCACGCTCTCCCGGCTTTACGGCCCTTACCAAGTGCGCCGTAAAGGGTTTTACAGCCGCGCACGGAGCGGGCGCAACGATCTGACACACGGCGCTGCGTACGCTCGTTTCCTTCCACTCTACATCGCTTTGATCTGCTCTCGTGACTTCGGCACTCCCATAAACCGGCTTCCCATAATGGCTAAGTCAGTGCTCGATCTCTACGAGCTATACAACCTGGTGATCGCCCGCGGGGGGCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCTTACGACTACCATCTTCTATCACGTCGGCCGCTTTCACACTTCGCACACAATACATGAAGTATTTATATGATTACGAGTGTGAGAAGAAGAACCTGTCGACCCGCAGCGAGCTGGACGCTGCTATCGAGGGTAACAAACGCGAAGGTCGACGTGCTTCCGGACAGTACGATGCCCAAGCCGCACTTGCTATGCCGTCGCTGAACCGTGGTGTGTCGCTTTCGATGCCGCTGGCTCAGCCGCTGGCTTTACCACTGGGCGGCGTGCCCCGGCTGCCGATGCACGCGCCGCACCTTCACAACCACGACATAGAGTTCCGCGTGCGCGAGTACATGAAGATGATACAGCAGCAACGCGAGCTCATCAGAAACGGGTCCGAGTCGCCCCCGGGTAACGGTGGTACGATGATGTCGCCCCGCGAGGCTGCGCTCAGCGCTATCGATGTATCCCGCCTCACGCTCTGGTCTctctacaacaacaacaacaacaacagcccGCAGGCCGACCTCGAGCCGCAGCGTGAGGCGTTGAATCTGAGCGAGAGTCCCAATTCGAGCGGCAGCGGCGGCAAGCGCGAAGCgtgccgctcgccgccgccccCCGCGAAGCGACGCACGCCGCGGCCGCCCTCACCGCGCGACACACCACCCcggcacgcgcatgcgcacccGCACACAGCGCACACCGCGCACGCGCCGCAGTTGAACGGCAGCGCGAACGGCGTCAACGGCGCCGCGTTTAAAATCACAACCAGAG
- Protein Sequence
- MRFGTFGTLSRLYGPYQVRRKGFYSRARSGRNDLTHGAAYARFLPLYIALICSRDFGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLAQPLALPLGGVPRLPMHAPHLHNHDIEFRVREYMKMIQQQRELIRNGSESPPGNGGTMMSPREAALSAIDVSRLTLWSLYNNNNNNSPQADLEPQREALNLSESPNSSGSGGKREACRSPPPPAKRRTPRPPSPRDTPPRHAHAHPHTAHTAHAPQLNGSANGVNGAAFKITTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_01154802;
- 80% Identity
- -