Trha010960.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- Su(H)
- Assembly
- GCA_018246435.1
- Location
- DWLU01002572.1:10345-14225[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-68 8.8e-64 215.3 0.0 1 123 222 344 222 344 0.99
Sequence Information
- Coding Sequence
- ATGCCGCACCAGTACGGCGCGGGCGGGATGGCGCAGGGcccgccgtcgccgccgccgcagcacgGCGCGCTGTATCCGCGCTACGCAAGCGCTGCGGGTCCCGGCGCCGGCGCTTACCGCCCAGAGGAGCGCCGCCTCACACGCGAAGCTATGGAACGTTATCTCCGTGACCGTTCTGACATGGTTGTCGTCATATTACACGCCAAAGTGGCTCAGAAATCATACGGCAATGAAAAACGGTTCTTCTGTCCACCaccttgtatttatttatttggcgATGGATGGCGGCTGCGTCGAGAGCGTATGCTCCGTGAAGGCGAAACAGAACAAGCTTCTCAGCTATGCGCCTTCATTGGCATAGGCAACTCTGATCAAGATATGCAACAACTAGACTTAAATAATGGCAAGCAGTATTGTGCAGCTAAAACATTGTACATATCAGATTCTGACAAAAGGAAACACTTCATGCTCTCTGTCAAAATGTTTTATGGCAATGGGCATGACATAggaatttttaatagtaaaagaataaaagtTATATCTAAACcatcaaagaaaaaacaatcattaaaaaatgctGATTTATGTATAGCTAGTGGAACAAAGGTGGCACTATTTAATAGACTAAGATCACAGACAGTTTCAACAAGGTACCTTCATGTAGAAAATGGTAACTTTCACGCTTCATCTACACAGTGGGGTGCTTTTACAATACACCTTCTTGATGATAACGAAAGTGAATCTGAAGAGTTTGCTGTGAGAGATGGCTATGTTCACTATGGATCTACAGTTAAACTTGTCTGTTCAGTAACTGGTATGGCATTACCTCGTCTCATAATCAgaaaggtGGATAAGCAAATGGCATTATTGGAAGCAGATGATCCAGTATCACAATTACATAAATGTGCGTTCTATATGAAAGACACAGAGAGAATGTACCTCTGCCTGTCACAAGAGCGCATCATCCAGTTTCAAGCTACACCATGCCCAAAAGAGCCAAATAAAGAAATGATCAATGATGGAGCTTGTTGGACTATAATTTCCACTGATAAGGCCGAATATCAGTTTTATGAGGGTATGGGACCAGTAAGATCCCCGGTAACGCCGGTGCCGCTGGTGCACTCGCTCAATCTTAATGGAGGCGGTGATGTGGCCATGTTGGAGCTGGCGGGCGACAACTTCACACCGTCGCTGCAAGTGTGGTTCGGCGACGTGGAAGCGGAGACGATGTACCGGTGCGCGGAGTCGATGCTCTGTGTCGTGCCCGATATATCGCAGTTCAGGGGGCAGTGGCTGTGGGTGCGACAGCCTACGCAGGTAACGTCATGA
- Protein Sequence
- MPHQYGAGGMAQGPPSPPPQHGALYPRYASAAGPGAGAYRPEERRLTREAMERYLRDRSDMVVVILHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRLRRERMLREGETEQASQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGNGHDIGIFNSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFAVRDGYVHYGSTVKLVCSVTGMALPRLIIRKVDKQMALLEADDPVSQLHKCAFYMKDTERMYLCLSQERIIQFQATPCPKEPNKEMINDGACWTIISTDKAEYQFYEGMGPVRSPVTPVPLVHSLNLNGGGDVAMLELAGDNFTPSLQVWFGDVEAETMYRCAESMLCVVPDISQFRGQWLWVRQPTQVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00736387;
- 90% Identity
- iTF_01140707; iTF_01147193; iTF_01149342; iTF_01147872; iTF_01142179; iTF_01141412; iTF_00719973; iTF_01144325; iTF_00072487; iTF_00318659; iTF_01302057; iTF_00651499; iTF_01145068; iTF_01143629; iTF_01279951; iTF_00640048; iTF_01124372; iTF_00146166; iTF_01333494; iTF_00011707; iTF_01125211; iTF_00012701; iTF_01129821; iTF_00840094;
- 80% Identity
- iTF_01494084; iTF_01494830; iTF_01115482; iTF_01495550; iTF_00249482; iTF_00180214; iTF_01129821;