Trha007204.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- -
- Assembly
- GCA_018246435.1
- Location
- DWLU01001068.1:913-2459[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-05 0.48 12.7 0.1 10 44 95 129 94 143 0.79 2 2 0.00037 15 7.9 0.4 18 43 145 170 122 217 0.72
Sequence Information
- Coding Sequence
- ATGACCACTACCCTAGAACGAAGTCTTTCTCGCAATTCGAGTACATCGTTGACGAGCCCTcggatttcttttaaaaatgaaGGCTCTTCTCCCACAATCCCCGACCCTTCCCTCTCGAATATCCTCGACCGCTTGAATACCCTAGATGCGCATGTACTTGACCTCCGTTCTGCGGTTTTAACCAAAGATGGCTATGTCGACCGCCGCAACCGTGAAGATAGGCACATCAGCCGAGAGTTCGAGAACCATTACTCCATCTCCTCGCGTATCGATTTGAACGTGGTCGCGTTAAGGAGAGATGTGGACCAACTGAGATCCAAAATTTTTCAGCTTAATTTGAGCGTCAGTCAATCGGAGAATAATATTGTTTGCTTGCGCAGTGATGTCGATCGCCTGCAGGCAAGAGTCGATCAGCTTCAAGCAGATCTGTCTGTTTTGAAGGCAGACGTCTCTGAGTTGAAAATGGATGTCTCTGAGTTGAAAACAGACGTCTATATTTTGAAAGGAGACGTTTCTATGTTGAAAGAGGACGTCTCTATATTGAAGAAAGACGTCTCCATGTTGAAGACGGATGTCTCTTCGTTGAAGGAACATATGAAGCTCTCGGAACGTGCTCGATTCAATTCGCTGATGCATCACCTGCATTCCCCAATCACGGTTGTTCCggccgttgatgatgatggctcTGTGCGATGGCCCAAATACTTTCCtcgtactgtttggcggttttGGTGTCTGAAAAAACGAAGCCGGATCCATCGATTGGTGGAGTTGGCAGAGTTTTATCGACTTGAGGGCTATCAGTACTGGTGCCAAAGCCGGGCTGACACCTTGTTTGGTGCCGGTGGCGATAGTGATAGTGATTCAAGCGAAGATAACTCGAATTTGACCCTTGCAGACGCCGTTCGTCAGTACCCGGAGTCTGCACACCAGGCGTTGGCCGGTACTTTGGGATTGGTATATCATAAGATTCAAAAACTCGTTGAAGCTGATTCCCGCTTACCCCATCGCCCCCCTAAACGTCAGCAAGAGGAGGAGTCAAGCACGTCGAGCGCCAAGCAGAAACCAGTCAAAATAGCACGCCGCCCTAATAATCCTGTATCGCCTACCACTTTACACAAACTCACCACTGGACCTATACTCGAATCTAGGTCCATGGTTTCGGACAAGTCAGACAAGCTAGAATGGGACCACCGCATGGGAACTGATGATGCAACACACGCGTTACGCGACATTACCGCCGAAGAGGTCGGTACGCTGCTTCGTGCATTGGAGCAGGGCCGGCTCAAATTGAAACCCAGCAGATCTGAACGGATGAAAATGTCCCCAGCAGAGGACAAAACTGGAACCCGCCAGGGAGAATTAGCCGAAGGAAATCAAGATGATGAAGAGCGGGCACCGACCGTACCTACTGAAGTTGCTTCGCCATCTTCATCAAGAGGGACCGAACAAGACGACATCCCAGACACTGCATCAGTTCCCAATGAATAG
- Protein Sequence
- MTTTLERSLSRNSSTSLTSPRISFKNEGSSPTIPDPSLSNILDRLNTLDAHVLDLRSAVLTKDGYVDRRNREDRHISREFENHYSISSRIDLNVVALRRDVDQLRSKIFQLNLSVSQSENNIVCLRSDVDRLQARVDQLQADLSVLKADVSELKMDVSELKTDVYILKGDVSMLKEDVSILKKDVSMLKTDVSSLKEHMKLSERARFNSLMHHLHSPITVVPAVDDDGSVRWPKYFPRTVWRFWCLKKRSRIHRLVELAEFYRLEGYQYWCQSRADTLFGAGGDSDSDSSEDNSNLTLADAVRQYPESAHQALAGTLGLVYHKIQKLVEADSRLPHRPPKRQQEEESSTSSAKQKPVKIARRPNNPVSPTTLHKLTTGPILESRSMVSDKSDKLEWDHRMGTDDATHALRDITAEEVGTLLRALEQGRLKLKPSRSERMKMSPAEDKTGTRQGELAEGNQDDEERAPTVPTEVASPSSSRGTEQDDIPDTASVPNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01143616;
- 90% Identity
- iTF_01143616;
- 80% Identity
- iTF_00180206;