Tobl011606.1
Basic Information
- Insect
- Troides oblongomaculatus
- Gene Symbol
- -
- Assembly
- GCA_029032895.1
- Location
- JARDWC010000206.1:76269-79292[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-08 2.1e-05 24.6 0.0 8 40 8 38 7 43 0.87
Sequence Information
- Coding Sequence
- ATGTTCCATGTCCCACCTAATGCTTTGAAAGCTGTTGACACTGGTATTTCACTGAGAAAAGCTGCTGCAGTGTACGGAGTTCCCATAGCTACACTCTCTAGAAAAAAAGGGAACCCTGAAATATCCAAACAAAAAACTGGACCAGCAACTGTTTTTTCTGATACCGAAGAACAAAAAATAGTTGACTGGATTCTTTTTAGAGCTCAGCGTGGTTTACCAGTAACTAAAACAGAGCTCTTGGATTCTATTCAACAATATGTGAAAAAGTCAAAAAAAGAAACTCCGTTTATTGATAGTCGGCCGAGCCGACATTGGTATGAGGGCTTTCGAAAACGACACCCTCAAATGTCAATCAGGAAGCCACAACATCTGACTCATAGTAGAGCAGCAGTGACCGGTGATGACCTGAAAGATTGGTTTGATGAACAAGCTAAgtatttaactgaaaaaaaattaatggagaTTCCTTCTACGAGAATTTTCAACTGTGACGAGACTTATGTAAGTTTATGCCCTCCATCTGAAAAAGTATTGTTAGCTAAAGGATCCCGTTCTGCATATAAGGTGGTTGATTCTGATAAAGAAGGATTTactgtattgtttatgtatagtgCTAATGGTGATCGTGCACCTCCCATGATCATGTTTCCTTATAAAGAAGAAGTACCAGagaaaattgtcaaaaattGTCCTGAAGGTTGGGGTGTTGGGCTCTCAGATAATGGGTGGATGACCTCAGAGTCAttctatgaatatataacaaatatattttacccaTGGCTAGTGAAACAAGGAACTCAGTTTCCAATCGTGTTATATTTGGATAATCATTCATCACATATGACTATGCCTCTGGTTACATTTTGTCGTGAAAAGGGTATTGAGTTGATTGGACTTGTTCCCAACTCAACCCATATAATGCAACCACTtgacattagtttttttcaCCCATTTAAAGAGACATGGAAAAAATCTGTACCAAGATggaaaaattctaaaaatgtttcccgagtaaaaaaagaagattttcCATTAGTTCTAAAGTTTGCATTGGATGCTATGGCACAAGAAAAAAATGCTGTTATCAGTGGATTCAAAGCTGCAGGCTTGTATCCTTTCAATCCTTCTGCCGTTGACTATGATGTatttgataaaagaaagaaatctaAAACAACAGTAACTAAAGAAAATGTACAAGATGAAGTAACAGAAGATAAGGAAAAACATCTATTAACCTTCGAAACCAATTTATCAAAGGATATTCTGGAAGAATTTAATACTGCTTGGTTGAATCAGACATTGCCTAAGGATCTAGAAATTAGAGGCTTGTATAAATACTGGCTTGATGTCAGTGGAAAATCtgattttcttgACAGTACACCTGCTATTACAACTGCTTCTACAGCTGCTTGTACTACGCCAACTATTGACAAATATTCTGAGCTTCAAGAATGTCAAACGTTTAGTCAATCAGTTATTGGTAAAGAAAATGACTCTATATCTGCTAATAaaaTTGAAACCGATGCTGGGAATCCTTTTGACGACGCATTTAAGATGCCAACTAATTATTTACCGAAGAAAAAAAGGATTAAACTGGAGTCATCCGGCAAACCCAAACTACCTTCTGCTGGTACATCTGATCAGTGGATGCAATATCActcaaaaaaagaaaatgatcggaaaataaaagaagaaaagttacaaaaaaagaaaaaattacaagaagAGAAGAAACTTATAgctgaagaaaagaaaaaattacaagataAAATGAAAGCAATACAACGAAAAATCAAAGAAGAAacgaaatag
- Protein Sequence
- MFHVPPNALKAVDTGISLRKAAAVYGVPIATLSRKKGNPEISKQKTGPATVFSDTEEQKIVDWILFRAQRGLPVTKTELLDSIQQYVKKSKKETPFIDSRPSRHWYEGFRKRHPQMSIRKPQHLTHSRAAVTGDDLKDWFDEQAKYLTEKKLMEIPSTRIFNCDETYVSLCPPSEKVLLAKGSRSAYKVVDSDKEGFTVLFMYSANGDRAPPMIMFPYKEEVPEKIVKNCPEGWGVGLSDNGWMTSESFYEYITNIFYPWLVKQGTQFPIVLYLDNHSSHMTMPLVTFCREKGIELIGLVPNSTHIMQPLDISFFHPFKETWKKSVPRWKNSKNVSRVKKEDFPLVLKFALDAMAQEKNAVISGFKAAGLYPFNPSAVDYDVFDKRKKSKTTVTKENVQDEVTEDKEKHLLTFETNLSKDILEEFNTAWLNQTLPKDLEIRGLYKYWLDVSGKSDFLDSTPAITTASTAACTTPTIDKYSELQECQTFSQSVIGKENDSISANKIETDAGNPFDDAFKMPTNYLPKKKRIKLESSGKPKLPSAGTSDQWMQYHSKKENDRKIKEEKLQKKKKLQEEKKLIAEEKKKLQDKMKAIQRKIKEETK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01495720; iTF_01495723; iTF_01495725;
- 90% Identity
- iTF_01495720; iTF_01495723; iTF_01495725;
- 80% Identity
- iTF_01495723;