Basic Information

Insect: Troides helena
Gene Symbol: sip1_1
Assembly: GCA_029286815.1
Location: JAGSMV010000028.1:2192810-2201401[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2e-59 2.8e-55 188.5 4.4 6 275 371 622 366 622 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2e-59	2.8e-55	188.5	4.4	6	275	371	622	366	622	0.96

Sequence Information

Coding Sequence: atgtctgatgatgaagtgatacgTTTCGAAATAACCGATTATGACCTGGACAATGAATTTAACCCTAACAGACAACGTAAAGCCAAAAAAGAACATCAAATATATGgtGTTTGGGCAAAGGACAGTGATGAGGAAGATAATGAAGATAATATCAGACAAAAATCCCGTAAACACAAGGATTTTTCGGCTCCTATTGGGTTTGTGGCAGGGGGAGTACAGCAGactggtaaaaaaaaagaaggtaaTAAAGAGCTATCATCTGCAGAGGCATCTTCATCCAGACATATAGCGGTGGATAGTTCAGAAGAAGAAGATGGTGTTGATGATCCTTTAACTTCAGATACTGCTGGCATTAGAAAGCAGGGTCAAGGTATGAGGCCACCTAACCTTGGTGGTAGTGTTGGAGCATGGGAGAGACATACTAAAGGAATTGGTGCAAAACTCTTATTACAGatGGGTTACCAACCAGGCAAAGGTTTGGGCAAAGATCTTCAAGGTATATCTGCACCTGTAGAAGCTACAGTAAGAAAAGGCAGGGGTGCTATAGGAGCTTATGGGCCAGAAAAAGCAACTCAAAAAGCGAAAAAGGAAGAAGAGCGCCGCCTTAAAGAGAAAGAGGAACAGGAAAAAGGTACATCAGAAAAAACATGCAATTGGAAAAAGTCACACAAAGGGCGCTACTTCTATCGAGACTCTGCTGACGTTATCCAAGAGGGTAAACCAATAATGCATACTATTGGCAGTAGCGAGTTGGCCAGGGTACCAGTTATTGATATGACTGGTAAACAGAGACGCGTACTGAGCGGTTACCACGCGCTGAGGGCTGCAGCGCCCCGGTACGAACATGAGCCAAGAAGACAATTGCAACATTTCACTGCGCCACAACTCACACACAACTTGCAGTTAGTTGTCGACAGTTGCGAACAGGATATAATACAAAACGCTCGGGAGCTCCAAGCTGCGGAAGACGAAATAGTGGTCCTAGAGAGAGACTTAgaagaatacaataaaaaactaCAAGAAGAAGATTGTGTTATTAGCAAAGTACAATCTATCATAGAACAGATAGAGGAGCTGAACAAACCGGATGTATCACTGGAGACATCATATGAAGTGCTCGCGGAATTGAAGAAATCCTTTTCGCTTGAATATGAAATGTTCAGTCTCGGCACCATAGGAGGGAGCATAGTCAGTCCATTGCTAAGCGCTTTGTTAGCGAAGTGGGATCCATTGCAGGACCCGGACGAACCTATTCCAATTTTTCTGAAATGGAAGAAAATTCTCAATGAGGAAGCATACAACAGTTTGCTGTGGCAACACTTGGTACCTCATATCACATCCGCCGCAGAGGTGTGGAATCCACGTAGTCCGGAGCCGCTGCTGCGTGTGTTCGAGGTGTGGGTGGCCGCATGTCCGAAGTGGGTATTGGAGTCGTGTGCGGCGCGAAGTGTGGTGCCACGCATATTGGCGGCGGTGCGCGCGTGGGACCCCACTGGCGACACCCAGCCGCTTCACCACTGGGTGCTGCCATGGCATGATCTAGCCGGTACCGCGTTGAGCAACGGTGTGTACCCGTTGATCCGATCGCGGCTAGCGAGCGCGCTGGCGGCGTGGCACCCGGCGGACGGGTCGGCGCGCGGATTGCTAGCGGCGTGGCGGGGTGCATGGGGTCCAACGTTACGCCCGCTTCTACACCACCACGTGCTGCCCAAGCTCGAGCACTGCCTCCAGCATGCGCCGCTCGAGCTCGTCGGCAGGGAGAACACGGCCTGGTTGTGGTGTGTGCAGTGGGTTGATTTGATCGGGGCGCCGACCATCGCAGCGTTGGCAGCTCGCGCtctcctaccacgctggctggCAGCACTAGCGGCGTGGCTTAACACGGCACCGCCGCACGCAACAGTCCTCAATTCCTACAGTCAGTTTAAGAAAATGTTCCCAGAGGAAGTGTTGAAGGAACCGATGGTACGCGACGCGTTCCGAAAAGCGCTCGACATGATGAATAGAAGCACCGACATTGACACCGTCAAGCCGCCAACGCCGCCGCGCTTCGAGATCAACGAGATCCTGGCGACGATCACTCCCAACAAAAGCTTCTCGGAACTCCTCGAGTCCAGGTGCTTAGAGAGGGGGATCACGTTCGTGCCAATTTCAGGTAAGACAAGGGAAGGCAGGCCACTGTACAAGATAGGGGAGATGCAGTGCTACGTCATCAGGAACGTCATAATGTACTCCGAGGATGGTGGCAGATCATTCGCGCCGATCGGCATGGACCGTTTGTTGGCTATGGTCGAAGACTGA
Protein Sequence: MSDDEVIRFEITDYDLDNEFNPNRQRKAKKEHQIYGVWAKDSDEEDNEDNIRQKSRKHKDFSAPIGFVAGGVQQTGKKKEGNKELSSAEASSSRHIAVDSSEEEDGVDDPLTSDTAGIRKQGQGMRPPNLGGSVGAWERHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKATQKAKKEEERRLKEKEEQEKGTSEKTCNWKKSHKGRYFYRDSADVIQEGKPIMHTIGSSELARVPVIDMTGKQRRVLSGYHALRAAAPRYEHEPRRQLQHFTAPQLTHNLQLVVDSCEQDIIQNARELQAAEDEIVVLERDLEEYNKKLQEEDCVISKVQSIIEQIEELNKPDVSLETSYEVLAELKKSFSLEYEMFSLGTIGGSIVSPLLSALLAKWDPLQDPDEPIPIFLKWKKILNEEAYNSLLWQHLVPHITSAAEVWNPRSPEPLLRVFEVWVAACPKWVLESCAARSVVPRILAAVRAWDPTGDTQPLHHWVLPWHDLAGTALSNGVYPLIRSRLASALAAWHPADGSARGLLAAWRGAWGPTLRPLLHHHVLPKLEHCLQHAPLELVGRENTAWLWCVQWVDLIGAPTIAALAARALLPRWLAALAAWLNTAPPHATVLNSYSQFKKMFPEEVLKEPMVRDAFRKALDMMNRSTDIDTVKPPTPPRFEINEILATITPNKSFSELLESRCLERGITFVPISGKTREGRPLYKIGEMQCYVIRNVIMYSEDGGRSFAPIGMDRLLAMVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00957964;
90% Identity: iTF_01115714; iTF_01495788; iTF_01494321; iTF_00180504; iTF_00197377; iTF_00249716;
80% Identity: -