Taea023135.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Troides aeacus
Gene Symbol
-
Assembly
GCA_033220335.2
Location
CM067295.1:1063345-1085132[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.31 30 6.0 0.3 1 23 518 540 518 540 0.96
2 11 0.00016 0.016 16.3 2.1 1 23 552 574 552 574 0.97
3 11 0.00018 0.017 16.1 3.3 1 23 580 602 580 602 0.99
4 11 3.8e-06 0.00037 21.4 3.3 1 23 609 631 609 631 0.99
5 11 5.4e-05 0.0052 17.8 0.3 1 23 637 659 637 659 0.93
6 11 7.2e-06 0.00069 20.5 0.0 1 23 665 687 665 687 0.98
7 11 4.6e-06 0.00044 21.2 1.9 1 23 693 716 693 716 0.96
8 11 0.00029 0.028 15.5 1.8 1 23 722 745 722 745 0.95
9 11 0.00017 0.016 16.2 0.8 2 23 752 773 751 773 0.97
10 11 1.3e-06 0.00013 22.8 0.3 1 23 779 801 779 801 0.97
11 11 0.0029 0.27 12.4 0.6 1 23 807 831 807 831 0.94

Sequence Information

Coding Sequence
ATGAATTGCCTCGTGTGCAATAACAGAGCCGGTGTTTCCTTAAGGAATGGTGTGAACATATTCACAGATCCGACCACACTGCAGTCCGGGAAGAAGTTGGTTGAGGTCCTCAACGAAATCGTGGAGAAACCGGTGAAGGAGGATGAAGCGCAGTCGAAGATACTTTGCAAGAAATGCTATAAAACATGTACGGAATACGACTCCATACAAGTAAGATTGAAAGTTATACAGACGTCCATGTTGAGCCAGTTCAAAAAGACACTAAAGAGTCATAACCTGAGCTATCAGACTGAAAGCAAAGAGGCAAGCAAAGTTGTTGCTGTGAGCGGGGAGAAGAAGTTCGAGGGCAAGAGGATCGTACTGCCGGCTTCGAAGCTGCAGCCTCTGCCCCCGGACTATCTGCTCAGGCCGGACAAGTGGCAgccagcagcagcagcgcggCCTGTCACCACCATCGCTTCCAAACTCAATAACGAAATCAAGATCCTGACACCGTCGACATTGAACCTTAAGGTCACCGTCGGCACGTCAGTACTCACACAGAGCATTAAAACTACCAGCTCGTTGACGGGGAAAACACAAAGAACCACCAGCCAGAACTCATCAGCGCCGCAGACCGTCTCCATTGTGTCGTCATCGGCGATGACAGCGGCGACTGTGCCATCAATAACGTCATCGGTGTCGTCGGCAGCAGGCGCGAAGGTGTCGAACTCGGTGCTAAGCATCAACGTAAAGGATCTTCAGAAGAATGACTTCACGTCAGCGATTCTAGCCAAGATGCTCGGGAGGTCGTCCGATTTGGAAGATTTTAGGCAAGCCGGGAAGGACGTCGGCAATGATGCTGGCAATGAGGGGCAGCCCATGGAGATTGACGAAGATTGTTCCTTAGCAGTCATAACAGCATCTGAGGAGGGTACGAAGATGTTTAGTGAGACAACGCCCAAgTTGGTCACCGAGGAAGACAACCCCCAATCCGACGGCTACTTCGACGTCAGCTTGCTATCGTGTCCCAGCGCCGATACCGAAGAGCTAGAGAAGAAGTATATACTCGGCAAGATAGAAATCCTGGACAACGACAACGATGACGAACACACGATACTAATGGACGGCGAGAACGGTTCTATTATACGGGTAGTCGCCGGGAAGAAGCTGCTGTACGGTGACAGCGAGATCTCTGTAGTGGTGCCCGgcgatggtgatggtgatggcgAGAACGACGACAACCAGGattCCAATGACGATACACAGATAGAGCTGCAGGTGTCGGGGGACGAGGAGACGGCGAATGCGATCATTGCTGCGGCACAAGAACAGGGAGGTGCGTTCATAAAGGTGGAGTCCGGTGAGATGTTCCAAGTGAAGTCTGTCCAGAGCAAGGTGGAGAACGAAGTTGAATCTAAGAGCGACGCTGATGTGTTGCAGATTGTCGCCAGGGTGGACGGGCAGTACAAGTGCATGATATGCGAGCAGAACGGGGAGGCGAAAGACGCGCTGTTTCCGGACGCAGCTGGTGCGGCTCAGCACGCCCGGTCTGCGCACGACGCGCGCCTGCACTACTGCGCGCTGTGCGGCGAGCTGATGCGCAGGAAGGCGGACTACATCGCGCACCTGGATAAACACACTAACAAAGCGCAGACCGACAAAAGCAAAACCCACGAGTGCACAATATGCAGTAAGAAATACAACTCGCGGCAGCTGCTCTCGGAGCACATGAACGTGCATAGCGGCGAGCGGCCATATCGTTGCGGCGTCTGCGGGAAGACCTTCGCCTCCAAGTACACGCATCAGTCCCACCTTAAGACGCACCTGGACAGGCCGCGACCGTTCAAGTGCACGCAGTGCGGCAAGTCGTTCCTCACCCAGCAGAATCTTACACAGCATCAAAAGACGCACTCCGGCGTCAAGGAGTTCATCTGTAAAGTGTGCAACAAGGCGTTCGGCACCCAGCACAATCTGGAGGTGCACGGCGTGGTGCACTCGGGCAGCCGCCCGTTCGTATGCGGTGTGTGCGGAAAGGCTTTCGCACGTCGCGCAGAGGTGCGCGATCACTTGAGAATACACACCGGTGAGCGGCCGTTCTCGTGCGAGATCTGCGGCGCGAGGTTCACCCAGCGCTCGAACCTGCACTCGCACAGGCGTGCGACGCATCTGGACGACAAGCGTTACAAGTGCCAGCTCTGCCCCAAACGCTTTAAGCGACGCAGGCTGCTGGATTACCACGTGAAGGCGTCGCATACCGGCGAGCGGCCGCTGCAGTGCGACGTGTGCCGCGCTACCTTCGTGTACCCTGAGCACTACAAGAAGCACGTGCGCATACACAGCGGCGAGAAGCCGTATGTTTGCGAAGTATGCGGGCGGCCGTTCAACACGCGCGACAACCTGAACACGCACCGCTACGTGCACAGCGACAAGAAGCCGTACGAGTGCATGGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCACCGGTCACTTGGCTGAATCGATAATTGTGAACCAGCCAAGAATAACAAAGGTACCAGATGTTGTGACATCGTCGGCCTCTCTGGTCCTGGATCCGATCGACGGGAACTCCACCAACCTCTCTGACTCCattTTCGAAACAGCAGAGACCTTAACAATGGAATCAACAGAGAAGTCTGTTGACGAGAGCACAGACTGCGACGCGGCTGAGCTGTTCTTAACGGACGACAAGAAGATTATTATAGAAGAAGGTAAATCAACAATAAACCTGGTGCAAGGCGGCGAGGAGACGCCGCTGATAACTTTACATAACATAGAGAACGTCAAAGACGCTTCCATATTGGATGCAGTGGGAACGGAGCAGCTCGTAGACGAAACgcagATTACAAGCGGCGCGACGGACGGCTCCGGGGTGCTGCGGCTAGTGCAGGTGCAGCTGCCCGATGGCCGCAGCGGCTGGCTCGCGGTCGACTGA
Protein Sequence
MNCLVCNNRAGVSLRNGVNIFTDPTTLQSGKKLVEVLNEIVEKPVKEDEAQSKILCKKCYKTCTEYDSIQVRLKVIQTSMLSQFKKTLKSHNLSYQTESKEASKVVAVSGEKKFEGKRIVLPASKLQPLPPDYLLRPDKWQPAAAARPVTTIASKLNNEIKILTPSTLNLKVTVGTSVLTQSIKTTSSLTGKTQRTTSQNSSAPQTVSIVSSSAMTAATVPSITSSVSSAAGAKVSNSVLSINVKDLQKNDFTSAILAKMLGRSSDLEDFRQAGKDVGNDAGNEGQPMEIDEDCSLAVITASEEGTKMFSETTPKLVTEEDNPQSDGYFDVSLLSCPSADTEELEKKYILGKIEILDNDNDDEHTILMDGENGSIIRVVAGKKLLYGDSEISVVVPGDGDGDGENDDNQDSNDDTQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFQVKSVQSKVENEVESKSDADVLQIVARVDGQYKCMICEQNGEAKDALFPDAAGAAQHARSAHDARLHYCALCGELMRRKADYIAHLDKHTNKAQTDKSKTHECTICSKKYNSRQLLSEHMNVHSGERPYRCGVCGKTFASKYTHQSHLKTHLDRPRPFKCTQCGKSFLTQQNLTQHQKTHSGVKEFICKVCNKAFGTQHNLEVHGVVHSGSRPFVCGVCGKAFARRAEVRDHLRIHTGERPFSCEICGARFTQRSNLHSHRRATHLDDKRYKCQLCPKRFKRRRLLDYHVKASHTGERPLQCDVCRATFVYPEHYKKHVRIHSGEKPYVCEVCGRPFNTRDNLNTHRYVHSDKKPYECMVCGAGYMRKQLLYHHMNTTGHLAESIIVNQPRITKVPDVVTSSASLVLDPIDGNSTNLSDSIFETAETLTMESTEKSVDESTDCDAAELFLTDDKKIIIEEGKSTINLVQGGEETPLITLHNIENVKDASILDAVGTEQLVDETQITSGATDGSGVLRLVQVQLPDGRSGWLAVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01130197;
90% Identity
iTF_01115863;
80% Identity
-