Basic Information

Insect: Troides aeacus
Gene Symbol: rst2
Assembly: GCA_033220335.2
Location: CM067297.1:3685535-3693049[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0068 0.65 11.2 0.1 3 23 132 152 130 152 0.97

2 15 0.0023 0.22 12.7 2.9 1 23 281 303 281 303 0.98

3 15 8.1e-05 0.0078 17.2 1.2 1 23 309 332 309 332 0.96

4 15 0.018 1.7 9.9 5.8 1 23 337 360 337 360 0.90

5 15 9.6e-06 0.00092 20.2 0.4 2 23 525 546 524 546 0.98

6 15 0.00044 0.042 14.9 2.4 1 23 552 574 552 574 0.98

7 15 0.016 1.6 10.0 4.1 1 23 628 650 628 650 0.96

8 15 1.2 1.2e+02 4.1 0.0 2 23 658 679 657 679 0.91

9 15 0.0034 0.32 12.1 4.3 1 23 685 707 685 707 0.95

10 15 3.8e-06 0.00036 21.4 0.4 1 23 713 735 713 735 0.98

11 15 0.0009 0.086 14.0 2.5 1 23 744 766 744 766 0.98

12 15 0.00021 0.02 16.0 1.2 3 23 813 833 812 833 0.97

13 15 0.024 2.3 9.5 7.3 1 23 850 872 850 872 0.96

14 15 1.7e-06 0.00016 22.6 0.6 1 23 878 900 878 900 0.98

15 15 4.8e-07 4.6e-05 24.3 3.1 1 23 906 929 906 929 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0068	0.65	11.2	0.1	3	23	132	152	130	152	0.97
2	15	0.0023	0.22	12.7	2.9	1	23	281	303	281	303	0.98
3	15	8.1e-05	0.0078	17.2	1.2	1	23	309	332	309	332	0.96
4	15	0.018	1.7	9.9	5.8	1	23	337	360	337	360	0.90
5	15	9.6e-06	0.00092	20.2	0.4	2	23	525	546	524	546	0.98
6	15	0.00044	0.042	14.9	2.4	1	23	552	574	552	574	0.98
7	15	0.016	1.6	10.0	4.1	1	23	628	650	628	650	0.96
8	15	1.2	1.2e+02	4.1	0.0	2	23	658	679	657	679	0.91
9	15	0.0034	0.32	12.1	4.3	1	23	685	707	685	707	0.95
10	15	3.8e-06	0.00036	21.4	0.4	1	23	713	735	713	735	0.98
11	15	0.0009	0.086	14.0	2.5	1	23	744	766	744	766	0.98
12	15	0.00021	0.02	16.0	1.2	3	23	813	833	812	833	0.97
13	15	0.024	2.3	9.5	7.3	1	23	850	872	850	872	0.96
14	15	1.7e-06	0.00016	22.6	0.6	1	23	878	900	878	900	0.98
15	15	4.8e-07	4.6e-05	24.3	3.1	1	23	906	929	906	929	0.98

Sequence Information

Coding Sequence: atgaatttaaatattgttgtagAGTTAGATCCATTGGGAACATATGATTTCCCATCATATCCAAATTATGCACCGCTGCTGATACCTATAGAATATCCAAACACGAATACAACATACCAGAACAATGTAAAAAATGAAGCATATCAATATCCAACAACATTGAATGGATTTAATACtgaaactaataatataaatgaaacaaaaccTGTAGTTCCAGAAGAAACTactaatgtaaatgtaaatactagtAATGAACAAATGATAGAAAATCAAAATGGTGAGGACCCGACAccaacaaataaaacaattaaaaaagaatCTAAGAATGGGAAAGATAGGAAGAGCAATAATCTCTCAGAGAAGATTGCTGATAGCAATTTCCCATTCTACGGCTGTGCAGTGTGCAACATTAGCTTTAAGTTATTGACAGATTTAGATAAGCACATAGCAACACATAAAGATAGAATAACAAGTTACGGTTTGCGTTTGAAGAATCAATTGAAGCGGAAGAAATTGCGGAAGGAGCAAAAAAAGTTGAAGAAGTTAAAAAAGTCTATTAAGAAAGAGAAGGATTTGGAAATGAAAATTGAAATCAAACCAGAGGACGGCTACATTGGTAATATGAAAGTGGAGGACTATAAACAGGATTCCAAAGATGATTCTAAAGTGAACAATCTGGAACAAATAGTAGCAGATGCATCTGAGAAGAATGAAGAGGTTAATAAGAAAGAAGAGGTTAATAAGAAAGATGAGGTTAATAAGAAAGATGAGGTTAATAAGAAAGAAGAGGTTAATAAGAAAGATGAAGGTAAAGAGAAGGACTACAACTTGGAGAAGATGTTTAAGTGTTTCGCTTGTCAGAAACAGTTCACCTTAAGTTACTATCTTAAGTTACACGTTAGATCTCATACAGATGAGAAACCTTACACATGTGCGGAGTGCGGTCAATGTTTCATAACGGCAAGCAAGTTGGGACGGCACAATAAGAGAATACACCTTGCCATCAGGCATCAGTGCAGGATCTGCTATAAATTCTTCTCGAGATTCGAATACCTCACCAAGCACTTTGACAACAAGCATCCGGAGGATAAGTTGGAAGGGGAACCGTACgATTACAATGCAATCCTGCCGTACCTTAATGAGTTGGAGGAGCAGATACAGACTAAAGTAGAAGATGAGAATGAGAATGAGAATGAGAACGAGAACGAGAATGAGAATGAGAAGGAAGTTAAAACCAATGAGGAGAACCTGTGGGATGACTGGCCAGCGGAACAGCCCCACATCAGCTACATCGCAGAACCGATCCAGGTTGGGGACGAGCCCCTGATAGACATCCAGGCTGGCGATGATGGTTCCATTCACGAGCTGGTTGTGACTAAGGAGTTGGATGTAGACGTGAAGGACGAGGTGGAGTTGAACGAATATATATCGGACAATGATAATAAGGATTGTGTGAAGAATGATAGCTGCTCGGACAGCGACTACTTCCCGTCGAACACTTGGGCGTCGTCGCCGCAGCCGATGGAGGAGCCGGCGCCGCAGCTCAAGCGCCCGAAGTCTGACCGACCGATCAAGTGCGAGGTCTGCGAGAAGGAAATCAGGTCGCAGTCGTACCTCCAGATACACATGAGGACCCACACCGGGGAGAGGCCGTTCAAATGTTACATATGCAGCAGGGGCTTCATCACGGCGAGCAAGATGCACCGTCACGTCCTCACCCATGCAGACGTTCAGGATGACAAGACTTCTGTCAGAAGTGAGATGATGGTCCCCGAATCTGGTTCTGATGTCGCCAAGAAGAGAAGGAGAAGAAGTAAagaATCGGTGAAGAAGAAGACCAAAGCAAAAAAAACTGACAAGACCCGCCAACAGAAGAGGCCGCATGCCTGTGAGTACTGCCAGAAGCGGTTCCTTCACCTGGCCACCCTGCAGGTCCACAAACGGTCGCACGAGGGCGAGGAGCTGGTGCTAAAGTGCAACTACTGCCTGCTGAGGATCGACGACGCGGAGGCGCTGAGGGTGCATGAGGCCGGACACGAGGGGCCGAAGCCCTACCTCTGCACCATATGCGGGAAGAGTTATAAGAAAAGGGAGACCATGATGTACCACAGGAAGCACCACAGCGCTGACAAAGAGTTCACTTGCGACATCTGCTCCAAGGGCTTCCCGACATCGAGAAAGCTGGAGAAGCACATCGCCACGCACCGCACGGACCGGTACGTGGTGCGGTACGAGTGCCCGGTCTGCGCTCATATGTTCAACACCAAGTACCACATCAAGATGCACCTGGCGACGCACCAGAAGGAGGGCCTGATAGTGGAGGAGAATCGGAACGAGATTCTCGCCATGGTGCTCCAGAACGCGCGCAGAATACCAAAGCACCCGGACGCCGCCGGCATCACGGACAAAGTGCCGCAGGACGAGCAGAGCCGCATGTGCAACATATGCGGGCAGGTCTTCCAGCACTTCTACTATTTGGAGGAGCACCTCAAGAGTCACGGCTCCAAAATAGCGCTGGAGGACGACGACAGGACCGAGGAGAAGAAGCACACGTGCCAAGTCTGCAACAAGAGTTTCAAGCTGCACTACTACCTCAAACTTCACAGCTTCACTCACACGAAGGAGAAGCCTTACATCTGCCAGCAGTGCGGCAAGGGCTTCATAACCCGGGGCAAGCTGAAGAGGCACCTGGAGACCCACACGGGGCTGAAGAAATACCAGTGTCATATCTGCTACAAGTTCTTCACGAGACCTAGTTACCTCAGAATCCATGTGCGGACTATTCACGGCACCCAAGATTATAACTTCACATTGGATAAGCAGTTCGGAGTGAGCAGTTTGACCGGTGTGCGGCAGACAGTTTAG
Protein Sequence: MNLNIVVELDPLGTYDFPSYPNYAPLLIPIEYPNTNTTYQNNVKNEAYQYPTTLNGFNTETNNINETKPVVPEETTNVNVNTSNEQMIENQNGEDPTPTNKTIKKESKNGKDRKSNNLSEKIADSNFPFYGCAVCNISFKLLTDLDKHIATHKDRITSYGLRLKNQLKRKKLRKEQKKLKKLKKSIKKEKDLEMKIEIKPEDGYIGNMKVEDYKQDSKDDSKVNNLEQIVADASEKNEEVNKKEEVNKKDEVNKKDEVNKKEEVNKKDEGKEKDYNLEKMFKCFACQKQFTLSYYLKLHVRSHTDEKPYTCAECGQCFITASKLGRHNKRIHLAIRHQCRICYKFFSRFEYLTKHFDNKHPEDKLEGEPYDYNAILPYLNELEEQIQTKVEDENENENENENENENEKEVKTNEENLWDDWPAEQPHISYIAEPIQVGDEPLIDIQAGDDGSIHELVVTKELDVDVKDEVELNEYISDNDNKDCVKNDSCSDSDYFPSNTWASSPQPMEEPAPQLKRPKSDRPIKCEVCEKEIRSQSYLQIHMRTHTGERPFKCYICSRGFITASKMHRHVLTHADVQDDKTSVRSEMMVPESGSDVAKKRRRRSKESVKKKTKAKKTDKTRQQKRPHACEYCQKRFLHLATLQVHKRSHEGEELVLKCNYCLLRIDDAEALRVHEAGHEGPKPYLCTICGKSYKKRETMMYHRKHHSADKEFTCDICSKGFPTSRKLEKHIATHRTDRYVVRYECPVCAHMFNTKYHIKMHLATHQKEGLIVEENRNEILAMVLQNARRIPKHPDAAGITDKVPQDEQSRMCNICGQVFQHFYYLEEHLKSHGSKIALEDDDRTEEKKHTCQVCNKSFKLHYYLKLHSFTHTKEKPYICQQCGKGFITRGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFTLDKQFGVSSLTGVRQTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115857;
90% Identity: iTF_01495196;
80% Identity: -