Basic Information

Insect: Troides aeacus
Gene Symbol: -
Assembly: GCA_033220335.2
Location: CM067273.1:4166780-4175393[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.018 1.7 9.8 1.4 3 23 474 495 473 495 0.92

2 23 0.28 26 6.1 0.3 1 22 874 895 874 895 0.95

3 23 5.4 5.2e+02 2.1 0.3 1 22 937 958 937 960 0.82

4 23 0.44 42 5.5 0.5 2 21 970 989 969 990 0.93

5 23 1.1 1e+02 4.3 0.1 2 23 998 1020 997 1020 0.89

6 23 0.0049 0.46 11.7 0.1 3 23 1041 1062 1039 1062 0.96

7 23 0.0053 0.5 11.5 2.5 1 23 1068 1091 1068 1091 0.95

8 23 0.1 9.7 7.5 0.0 1 23 1117 1140 1117 1140 0.90

9 23 0.0044 0.42 11.8 3.5 1 23 1145 1167 1145 1167 0.97

10 23 0.013 1.2 10.4 0.3 1 23 1173 1196 1173 1196 0.95

11 23 0.0019 0.18 12.9 1.3 1 23 1210 1232 1210 1232 0.97

12 23 0.00014 0.014 16.5 1.8 1 23 1281 1304 1281 1304 0.97

13 23 0.0016 0.15 13.2 1.5 1 23 1366 1389 1366 1389 0.96

14 23 0.00089 0.085 14.0 2.1 2 23 1413 1435 1412 1435 0.95

15 23 0.0044 0.42 11.8 0.0 2 23 1441 1463 1440 1463 0.94

16 23 0.008 0.77 11.0 0.2 1 21 1506 1526 1506 1527 0.95

17 23 0.00034 0.032 15.3 1.0 1 23 1537 1559 1537 1559 0.93

18 23 7.1e-05 0.0068 17.4 0.3 2 23 1649 1671 1649 1671 0.93

19 23 5.3e-07 5.1e-05 24.1 1.0 3 23 1678 1698 1677 1698 0.98

20 23 0.012 1.1 10.5 0.0 3 23 1719 1739 1717 1739 0.96

21 23 0.12 11 7.3 0.0 1 23 1762 1784 1762 1784 0.98

22 23 0.022 2.1 9.6 0.6 1 23 1790 1813 1790 1813 0.95

23 23 0.00073 0.069 14.2 0.4 1 23 1821 1844 1821 1844 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.018	1.7	9.8	1.4	3	23	474	495	473	495	0.92
2	23	0.28	26	6.1	0.3	1	22	874	895	874	895	0.95
3	23	5.4	5.2e+02	2.1	0.3	1	22	937	958	937	960	0.82
4	23	0.44	42	5.5	0.5	2	21	970	989	969	990	0.93
5	23	1.1	1e+02	4.3	0.1	2	23	998	1020	997	1020	0.89
6	23	0.0049	0.46	11.7	0.1	3	23	1041	1062	1039	1062	0.96
7	23	0.0053	0.5	11.5	2.5	1	23	1068	1091	1068	1091	0.95
8	23	0.1	9.7	7.5	0.0	1	23	1117	1140	1117	1140	0.90
9	23	0.0044	0.42	11.8	3.5	1	23	1145	1167	1145	1167	0.97
10	23	0.013	1.2	10.4	0.3	1	23	1173	1196	1173	1196	0.95
11	23	0.0019	0.18	12.9	1.3	1	23	1210	1232	1210	1232	0.97
12	23	0.00014	0.014	16.5	1.8	1	23	1281	1304	1281	1304	0.97
13	23	0.0016	0.15	13.2	1.5	1	23	1366	1389	1366	1389	0.96
14	23	0.00089	0.085	14.0	2.1	2	23	1413	1435	1412	1435	0.95
15	23	0.0044	0.42	11.8	0.0	2	23	1441	1463	1440	1463	0.94
16	23	0.008	0.77	11.0	0.2	1	21	1506	1526	1506	1527	0.95
17	23	0.00034	0.032	15.3	1.0	1	23	1537	1559	1537	1559	0.93
18	23	7.1e-05	0.0068	17.4	0.3	2	23	1649	1671	1649	1671	0.93
19	23	5.3e-07	5.1e-05	24.1	1.0	3	23	1678	1698	1677	1698	0.98
20	23	0.012	1.1	10.5	0.0	3	23	1719	1739	1717	1739	0.96
21	23	0.12	11	7.3	0.0	1	23	1762	1784	1762	1784	0.98
22	23	0.022	2.1	9.6	0.6	1	23	1790	1813	1790	1813	0.95
23	23	0.00073	0.069	14.2	0.4	1	23	1821	1844	1821	1844	0.96

Sequence Information

Coding Sequence: atgagTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCTATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCATGTCCTCGCATCGAAAATTAGGGATTGTGTGTCCGTAGAGATAAACGAGGATGACGACTTGCCAACTAATGTGTGCAGAAAATGCTGTGACAATGTGAATAACTGGCATATTTTTAAGGCTGTATGTGAGAGGACTCAAAACAAACTACagtctttattaaaaaatgatgGCAGCCAACTAGAAGAGGTGCACATAAAAAGTGAACCTTTCTCTGATGAGGCTTATGATGATGGAGTCATTGTTGATGCATCATATCCTGACCTTGAGtgtGCATCTAGTAAACTTCAACAAGAAGGCCCTCCAATTCTGGCTTCATTGGGACTCACACCAAGGAGTGATAAGAATTATATAGATCCCCGGATGGACTGGCACCGGGTGCACGCAATATTGGATATGGTTCAAGATGAAGAGGTCATTGATTCTCTGCAGTCTGCTGAAGAATGTGATGTATTGCATCACTCAGATCATGACTCTGAATCTGAAACTGAATTAATTTCTGATATTGATGAGCAATATATTCCTTGCAAAAATGGTTACATATGTAAAAGTGGACAAATAGTATCAAAAATTCCTTTGATATCAACtgctaaaaataatataaaaataaaagaggtGTCTAAAAATAGGAAATCAGATGTTACACCGAACAGGTATTGTTTTTTGCCAAAAAATGCTTGGCAATTATTTTTCACTGATGATTTACTAGAACTTATAGTCACTTCAACAAatgaaaaaattgaaaaacataaaaacaagaGTTCTGCATTAACAACTGTTAGCGAGATAAAAACCCTCATTGCAATTTTATACTTTCATGGTATTCTGCGTCCAACAAATGAAAAATGCAAGGATCTCTGGCATAATGAGTGTGGAATTGTTGGAATTCAAAATGCCATGAAGTATGACCGCTTCAGATTCCTTCTAGAGAACCTAAGTTTTGAATGTAGCAATGATGATGCAATGCAGGTTGATATCATGAAGCCAATGCGAAAAGCTTTTGAAATATTTGCTTATAATTGTAGAACTGCTTTTAACATTGACAATGTAGCAGTTGTAGATGAAATACTTCTTCAAGTTTTTGGTCCATGTCCATTTCGATTTAAAATAGACAGCAAACCACTGCAATGTGGTATTAAAATGGGTATGGAGAGTGAAAATAATGAAGAAGACGACGACGACGAAGAAGAGATGAATGATGATAATAGTCAACATTTCGCAAATGTACCTAATATGCCTGAGGTGTCTATCACTGTTATGCGTCCATCTGGGGAAACTTTGCACGCTCGTCAAGGAATACAACAACTTGCTTCTAAGGACTGCTTAGTGTGTGGTCGCTCTTATAGATATTCCCATAATGCTAGACGTCACGAGCTCAATTCTCACAATTTTGATAgatatacaaacaaaattacAACCAAAAAGTCGCATAATGTACACATGCACCCAAAACTTAGGCCCAATCCATTTAATCCCAAAGCTAGACTTATGCCAAATCCTATCAGCCATAAAATGCAATTAATCCCCAAAGGAATAAGCGCAAAAATTATTCAAGGGAATTCCGTTTCTTCACCAAAACCTATACCAATTAGAACGTCAAACATTCCTCATAATAATTTGCCATATCCACTACGTATAAAAGCACTTAAAGActtacaaataaagaaaaaagaacCCCAAATTCTTAAAACTTTATTGACTACAAAACCGGAAGTTTTGATATCAGAACCAGAAATAATGAATTCGGGCCCTGAAAGTCCAGAAACCTTGATATCCGAGCCAGAGATAGCATCGTTTCAAGTAGAAACTATTCTGTCTGAACCAGATGTTTACAATCACCAAGATGACGAAGATGTAGATTGCGAAACTCAAAATAATCAAGGTCAAAATTATGATACTGTAGACATGGAGTCTGATAATGAGATTGAAATTGCTCGACAACAAGAATGTGGTGTCGAAGTTGATCAACAAATAGATAACGAAGGGGAGGATGGAAATGGAATGGAAAATGTAGATAACGACGATGAAAATAACGGGGAAAGAAATCATAGCGACAATGATCAAATTGACGATAATGCTGATAGTCGTGACGTGTTGCAAATTGTTAACGACGTTGAATGTAGAGGGGATGATGAAACCAAAGAAGGCGAAGAAGGGAACGAGGATAGAGATGATGATGAGCAGCTAGAGTATAACCATGACGACGATTACGACGACTTACCTCCTATAGCTCCAGTCGTAGAAATTAATGAAGATATGCAAACAAATTCTTACAATAGTGAAGCAaacgaagaagaagatatgGACGAAGCTGGCGACGCCAATGAAACCGCCGATGATGTTAAAGAACTTGACCCTGATAAATTGTATGTAACGAAAACACAAAGAGACTTTATACTCAAATATCGCGATATTATCGAGCAGATTAACACAAAAAGATGCCTTTGTTGCGACAGAGAGCATCCGCGGCGCAAAGCGGTGATACAACATTTACAGAAAAATGGACACAAGGTTCCGAAGCACACTTGTTACAATTGTGTTGTTACGTTCGGTCATATCGGCGCTTTACTCAGCCACATGCGGTCTAACACATGTACCGACTTGtggaaaattatatacaatgaaaacgGGATCACTGACGATTTAGTTTTGGAAGATGAACCTAAAGATACCAAAGTCCAATATAAAGACATTTTTAATGCTAGGTCGTACGCGTGCAAATTATGTCCTGCAAAATTCCAACTGAAACAGTTCATTATGAAACATGTTTTAGACGTGCATGAGGATGGCCAGTCCCGCGTGCAACTCGTGTGCGTCCACTGTAACTCCAGATTCAAGGATAAGGCTATATGGAAGAAGCACATCCGTAATGGGGAATGTACAGTATACATCTCGTGTGACTTATGTTCAGAGAGATTTGGGAACATGCAAGATTTCAATGACCACGCATTGGCTGTACACGCAGGAAGTTTTGACCAATCTGATAATCAAAATAAATGCGTCGACGGGAGACCGACCGACTGTCCGATTTGCGGTAAGAAGAATAGTAGTTATCCAAACTTAgtaaaacatttgaaaattaTTCACAGTGAAGAAAAACCTCACTACTGCCAGCATTGTGAATCTAAGTTTGAACAAGCTGCTGACTTAAACAAGCATATCTATATGGAACATTCTGACCGAACATTGGGAATGCAAAGTTACGAGCCGGATATGTCGCTCGTTAAAGAAGAAGCCGAGGAATATCACTATTCATGTACAGAATGTAATGCTATATTTGAGACCGTCGACGCTTGGACGGATCATCAGGTGGCTGAACATAATCAAATTGCACATCATTGTGATCAGTGCGATAAGAAATTTTTAAGACCATCTGAACTGGCGGAACACAAGAATACGCATTTACGAGTAAAATTTTATCCCTGCAGTATTTGCACGAGCTCGTACAGTACACCTCAGAAACTTTCCGAACACGTTCAACAGAACCACCCGGGAGCCGCGGGAGCTTATGCACCTTTAGATTACGAATTTTTCTGCGACATCTGTATAAGATCATTCAAAAGTCGCCAGGCGTACTCGAATCATATGCGTATACACGCTAAGGTACCGACTACTAATAGAAAGCCCGGCGATCCGAAAGGATTTGCCCCACAAATTGTCGGAAAACCAATTAGGTCATTTTCTGTGGTACAGCCTAGTTTTCTTTCGTTCAAACCCAATTGTAATGTTCCTAATGCTCCTTATTCGTGTGATATCTGTGGAAAAGGTTTCATGCACAAGAAGAATATCTGGAAGCATAAGAAAGTGCTCCATGCCGATCTTGTCGGTGACAGGAATGATAGTGAAGAAAACACCATGCAAGCATCTACTGAAGAGGATGAATATAATTTAGACGAAAATGGAGCCATTCTGTCGACTCCCCAGttcaatagttttaattttgctAATTTAACCAATAGTTTCCCGCAGCAGCAGACTACCCAGGACGCTACGCCTTTTTCTTGCGAGATATGTTTCAAACGATTCCCGCTTAGAACAAGTTTATGGAAACATAAACGTGCTAAGCATGGTATCATCAATGCGAGTGCCAGCGGCAGTGCTGACTCTCAAGGTATAATAGGAGAAGGTGGCAGATCGAGTTGTACTATTTGTAAAATTACGTTCTCAGATAAAAAATCATACTACCGTCATAGAAAGAATGTTCACAAGTCCTCGGCACAGATGTGCAAAATTTGCGGGAAACCTTTAAATTCTCCGGTAGAATTGTACGAGCATTTAAAAGCTGCTCATGCTAGAGAGCTACTGGGATATAACGCAAACCAAGGCCCCAGTAAACAGGAGATTGTTCAAGAATTAGAAGTTGAGTACGAAGCTGACCAGGATTCCGTAGATCCCGCCATGGAGTATCAAGCCCGTTATCCATGTGACACTTGCGGTAAGCAGTTTGTAGGGTTGCTTGCCTTGCAAAACCACCAATGTATAAATCAATTACAATCGTCCCCTCAAACTTTTGATTGCGAAATTTGTCACAAAAGCTATACCTCTATCTCTGCACTGAAGAGTCACCGGGGCTGGCATTTACGTTCCCCTGACGGTAAAGCGGCCGCCAATAACACCGGCCTTTGGATGCCGCAGCACAAAGTCACTAGCAAAGTCAGCAAACACGAAGTCGTTGACCCATCGCAACTTGCAAGAGTTACTCATACAAACCCAGCGAGCATAGCCAAAAGAAGACTCCCACCCGAAGTGGAAGTGACTGTCGTGAATCCAAATAAGAAAATGCGCTCCGACGATTCGATAGAGTTGGAGCAACAGAATAATTCATCGACGGGGGCCGAAGATAGGTATTGTAACATATGCGATAAAGAATTCACCAAGCGAGCCGCCTATCAACGTCACATGGACGAAGTTCATCAACCGAATTCCGTGTTCTGTCCGGTGTGCGACAAGAGCTTCACACGAAAATCCACGCTGATCGTTCACCTGAAGAAACATTACGAGAGCGGAGAGGGCAGCTCCTCCGTTGTGGATCAGATGGAGGACGATGGGCTTGCGTGCGACATTTGCGGAGCGCAATACGACAGCGAGAGCGCCCTCGCCGCGCACCGCGCGATGCACATCGGCGACGAATCCGGCGAGTCGGACGACGGCGACGACGGCTCCAGCGTGCCGCCGCCGGGCGAGTTCACTTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCGCGGGACCTCATCGCCCACCGCTCCATGCACGCGACGCCGACCAAGTTCTTCTGCAACATCTGCAAGGTTTACTTCGCGCGCGCCCTCGACCTCTCGTCGCACACGCGCGCCAGGCACGCGGACAATGAGAAGGTGTTCTTCCCGTGCGCGATGTGCGAGCGGTTTTACATGAACAAGAAGAGCCTGCAGCGGCACATTGAGATGGCTCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPHVLASKIRDCVSVEINEDDDLPTNVCRKCCDNVNNWHIFKAVCERTQNKLQSLLKNDGSQLEEVHIKSEPFSDEAYDDGVIVDASYPDLECASSKLQQEGPPILASLGLTPRSDKNYIDPRMDWHRVHAILDMVQDEEVIDSLQSAEECDVLHHSDHDSESETELISDIDEQYIPCKNGYICKSGQIVSKIPLISTAKNNIKIKEVSKNRKSDVTPNRYCFLPKNAWQLFFTDDLLELIVTSTNEKIEKHKNKSSALTTVSEIKTLIAILYFHGILRPTNEKCKDLWHNECGIVGIQNAMKYDRFRFLLENLSFECSNDDAMQVDIMKPMRKAFEIFAYNCRTAFNIDNVAVVDEILLQVFGPCPFRFKIDSKPLQCGIKMGMESENNEEDDDDEEEMNDDNSQHFANVPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELNSHNFDRYTNKITTKKSHNVHMHPKLRPNPFNPKARLMPNPISHKMQLIPKGISAKIIQGNSVSSPKPIPIRTSNIPHNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLISEPEIMNSGPESPETLISEPEIASFQVETILSEPDVYNHQDDEDVDCETQNNQGQNYDTVDMESDNEIEIARQQECGVEVDQQIDNEGEDGNGMENVDNDDENNGERNHSDNDQIDDNADSRDVLQIVNDVECRGDDETKEGEEGNEDRDDDEQLEYNHDDDYDDLPPIAPVVEINEDMQTNSYNSEANEEEDMDEAGDANETADDVKELDPDKLYVTKTQRDFILKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLVCVHCNSRFKDKAIWKKHIRNGECTVYISCDLCSERFGNMQDFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHSEEKPHYCQHCESKFEQAADLNKHIYMEHSDRTLGMQSYEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICTSSYSTPQKLSEHVQQNHPGAAGAYAPLDYEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIVGKPIRSFSVVQPSFLSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVGDRNDSEENTMQASTEEDEYNLDENGAILSTPQFNSFNFANLTNSFPQQQTTQDATPFSCEICFKRFPLRTSLWKHKRAKHGIINASASGSADSQGIIGEGGRSSCTICKITFSDKKSYYRHRKNVHKSSAQMCKICGKPLNSPVELYEHLKAAHARELLGYNANQGPSKQEIVQELEVEYEADQDSVDPAMEYQARYPCDTCGKQFVGLLALQNHQCINQLQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPSQLARVTHTNPASIAKRRLPPEVEVTVVNPNKKMRSDDSIELEQQNNSSTGAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHLKKHYESGEGSSSVVDQMEDDGLACDICGAQYDSESALAAHRAMHIGDESGESDDGDDGSSVPPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCERFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01155687;
90% Identity: iTF_01495192; iTF_01495930;
80% Identity: -