Taea014641.1
Basic Information
- Insect
- Troides aeacus
- Gene Symbol
- run
- Assembly
- GCA_033220335.2
- Location
- CM067283.1:7419648-7430099[+]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-71 6.5e-68 226.9 0.0 2 129 21 148 20 148 0.98
Sequence Information
- Coding Sequence
- ATGCACCTTCCGCACGGTAGCCCTCCCGCCATCAGCATGGCCGACGTATACTCGCACATTCACGAGTACTACCGGCAGAGCCACGGCGAGCTGGTGCAGACGGGATCACCGGCGGTGTTGTGCTCTGCGCTACCAGGCCACTGGCGGTCGAACAAGTCTCTGCCTGTGGCGTTTAAAGTGGTCGCTCTAGACGACGTCCAGGACGGTACGTTAGTGACAATTAAAGCTGGAAACGACGAGAACATTATGGCCGAGTTGAGGAACTGCACGGCAGTGATGAAGAATCAAGTAGCGAAGTTTAATGACTTAAGATTCGTCGGCCGCAGCGGACGTGGAAAGTCATTTACTCTGACTATCACTATCAGTACGTTCCCAAGTCAAGTTGCAACATACGGCAAGGCGATTAAAGTCACAGTTGATGGACCTAGAGAACCCCGAACTAAACAAAATTATGGATACGGGCACCCAGGAGCATTTAATCCGTTTTTACTCAACCCTGGGTGGTTCGACGCAGCCTATCTCAACTACGCGTGGGCGGACTACTTCAGACCACCAATGAGAGAACAGACTGCATCTCTAATTAAAGGTACTACTCCGATATCAACACCGCCAGTGACGATACCTGGATCAGAACTGTTCCCGTTTCCGCCTACGATGACTAACTTACCGCCGGCCGGCCTATTGCCGCCACCTGGAGCCTTTCTACCACCAAACGGACTTCTGCCCTTCACACCACATCCTGCTGATTTGGCATTGAAGTCTTTGCCTCCCGAATTGACATTAAAGAACGGTGTTAATCCATACGAAGCTTTGAGGCACTTACAAAGCAACGTATCATCGATGGATACATCCAGCGCGCGTTTGTCACCGACAAGCAGCAGACAGAGCGGCAGCCCCAGAAGTATCGCTAACGGCAGTCCGCGATCTAAAGCAGACTCGAAATCTGAGGTCAACTCAACGCACGATGCGACAATTTCCGACGAATCTGACGAAGAGCCCATAGAGGTGGTGAAATCAGCGTTCCACCCAACGAGACCGGCGAACGTTGAACTACAAGAGATGAAGCAGGTTCAAGCCGCTGACTCGACAGTGTCCGACAGGCCAAGATTACGAAATGAGTTGAAAGCACCTACGTCGAGGTCGACCAGAGTCCTGTCCACTAGTCCAACGTCTACTAAAATTAGCAATGGAACAATATCAACTCACAAATCAGTGTGGCGGCCATATTGA
- Protein Sequence
- MHLPHGSPPAISMADVYSHIHEYYRQSHGELVQTGSPAVLCSALPGHWRSNKSLPVAFKVVALDDVQDGTLVTIKAGNDENIMAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITISTFPSQVATYGKAIKVTVDGPREPRTKQNYGYGHPGAFNPFLLNPGWFDAAYLNYAWADYFRPPMREQTASLIKGTTPISTPPVTIPGSELFPFPPTMTNLPPAGLLPPPGAFLPPNGLLPFTPHPADLALKSLPPELTLKNGVNPYEALRHLQSNVSSMDTSSARLSPTSSRQSGSPRSIANGSPRSKADSKSEVNSTHDATISDESDEEPIEVVKSAFHPTRPANVELQEMKQVQAADSTVSDRPRLRNELKAPTSRSTRVLSTSPTSTKISNGTISTHKSVWRPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00677312;
- 90% Identity
- iTF_01115490; iTF_01147202; iTF_00840101; iTF_00957733; iTF_01149351; iTF_01140008; iTF_01154793; iTF_01156057; iTF_01158491; iTF_01153630; iTF_01337549; iTF_01144334; iTF_01175983; iTF_00249489; iTF_00922675; iTF_00194954; iTF_00204148; iTF_01402518; iTF_01494839; iTF_01495558;
- 80% Identity
- -