Tjap001728.1
Basic Information
- Insect
- Trissolcus japonicus
- Gene Symbol
- nfxl1
- Assembly
- GCA_030522925.1
- Location
- JAPYZS010000044.1:45863-48849[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.023 3.2e+02 2.1 0.8 8 14 66 72 65 78 0.77 2 21 1 1.4e+04 -3.2 1.1 15 19 125 129 124 129 0.81 3 21 0.084 1.2e+03 0.3 0.4 4 10 160 166 159 166 0.96 4 21 2.2e-08 0.0003 21.3 18.3 1 19 174 191 174 191 0.99 5 21 7.7e-08 0.0011 19.6 17.8 1 19 227 244 227 244 0.98 6 21 0.87 1.2e+04 -3.0 1.2 5 10 268 273 268 273 0.92 7 21 0.007 96 3.7 11.2 1 19 279 298 279 298 0.86 8 21 1.1 1.5e+04 -3.3 12.0 3 18 336 351 323 352 0.89 9 21 0.0034 46 4.8 8.0 1 12 386 397 386 397 0.94 10 21 1.9 2.6e+04 -4.0 1.6 6 10 407 411 407 411 0.95 11 21 8.6e-08 0.0012 19.4 14.6 1 19 417 435 417 435 0.93 12 21 1.1 1.5e+04 -3.3 0.5 6 10 464 468 463 468 0.88 13 21 0.00014 1.9 9.2 8.0 9 19 483 493 481 493 0.90 14 21 0.00014 2 9.2 7.0 1 12 502 512 502 512 0.95 15 21 0.84 1.2e+04 -2.9 5.8 14 18 543 547 543 548 0.89 16 21 0.3 4.1e+03 -1.5 1.7 2 11 557 567 557 568 0.71 17 21 2.7e-05 0.38 11.4 6.6 1 12 584 595 584 595 0.97 18 21 0.26 3.6e+03 -1.3 0.3 6 10 603 607 602 610 0.90 19 21 6.1e-05 0.85 10.3 12.6 3 19 616 632 614 632 0.92 20 21 1.7e-05 0.23 12.1 11.0 1 16 677 691 677 696 0.95 21 21 0.69 9.5e+03 -2.6 0.6 6 10 727 731 726 731 0.89
Sequence Information
- Coding Sequence
- atgaagaGGTTCAAAAGAGCTCAGGCTCTGGATAGGGCTGCCATAAAGAAACACCTGGAAGCCAACAGCATCGTATATTCCAGTAGTGATGACGAGGACCTCAACGAAGAAACGTTGCAGCAAACGGTTGACAAAGTATTTGTCAACTACCAAAACGACGGGGCTGacacggaaaaaattttatcttactTGACGGACGTTTGTCATTCTGGCGCTTCCATTTGTCTCGTTTGCATCTCTTCAGTGAAAAAAGGCGATGctatttgGAGTTGCTCCACTTgctatacatttttacatctGCCGTGTATTCAACATTGGATCAGAGATAGTTTGacttacaaaaaagaaaaaggcaTAAAACCCGTCTGGGCATGTCCAAAATGTCGGATGGAATACGAAGAATCGGAAATTCCGAGCCGCTACTACTGTTTCTGTGGGAAGACCGAGGATCCACCGTATCAACCATGGAACTTGCCGCACTCCTGTGGGGAGTTATGTGGAAAGTTGCTACAACCCAAGTGTGGTCACAAATGCACACTTCTCTGTCATCCAGGACCTTGTCCTCCATGTCCAAAGATTGTACTCACAGcctgttattgcaaaaaacagTCAGAAGAGCCTCGCAGGTGCAGTTCCAAAGAGTGGAGTTGCGGCAGCGCCTGCGGTCGCACACTTTCCTGCGGTCATGCCTGCCAAGCTCCTTGCCACCCTGGATCTTGTCCTCCGTGCTCTGAGACCTCGAACGTTTCCTGCAACTGCGGGGCCAGAAAGGAAGTGAAACTTTGCAGCGAACGCGATTGGAAATGCGAGAGAGCTTGCAACAGAAAGCTCAACTGCAACGTGCACAGTTGCGAGGGATTTTGTCACCGTCAGGCCGACTGCGGGCCGTGtccttttgaaaaaaatcgcaCCTGTCCCTGTGGTAAGAAGAAGTACGCGATCTCATGCAAACAACAGACGACGCCCACTTGCGGCGACACTTGCGGTAAACTTTTGGACTGCAAGGCTCACTTTTGCAACATGAGATGTCACGCGGACAAGTGCGGTCAATGCATACAGGTCGTAAAGAAAAATTGCCGTTGCGAAAGCTTCAGCAAAGAAGTGGCATGCGGGAAGGAGTTCCACTGTAACAGAAAGTGTACCCAGATGAGACTTTGCGGACGCCACccatgtaacaaaaaatgttgcgaCTGTCTGATCAAAAATAACTTCAACATTTGCGAGAAGACCTGCGACAACACGCTCAACTGTCGTAAGCACAAGTGTTCGGCCCCGTGCCATAGTGGGCCTTGTTATCCATGTCCCAGGACTGTGGTCATCCAGTGTCGATGCGGGGGGAGCAAAATTACTGTGCCCTGCGGTACGGTGAAGAAGATAAAACCACCACCGTGCAACAGGCTTTGCAAGATCCCTCCGATTTGTCACCACCCGAAAAGAGAATCTCACAAGTGTCATCAGGGAGCTTGTCCACcttgcaaaaaagtttgtgCGATCAAACTTAGATGCGGTCATACTTGTCCTGCTGTTTGCCACACAAAAGTTTGGATAAAGGTAAAAATTAACGGGGTTACTCAACCAGTTGGTCCTTGGGACACACCACAAGAAAAATGGGAACAAAAAACACTGCCCTGTCCTCCATGCGAGGTTTCAGTCATGGTGTCCTGCCTAGGAGAACACGAGTGCAAACCCTGGCCCTGTCATCAGGCTAAACCAACGTCCTGCCTACGAGAATGCGGCAAACTTCTTGCTTGCTCCAATCACAATTGCGAGAAGTTGTGTCACAAAATCGACGAAGGCTGCTTGGAATGTGAGAAACCTTGCGGTCTTGCTCGACCCGTCGGTTGCACACACAGTTGTGATAAAATCTGTCACCCTGCGCCCTGTGCTCCTTGCAGACAGATGGTGAAGGTGCAATGCCACTGTGCCATTAATGTACTTTACATCCGCTGCTCTGTGCTCACTTCCGCCAGCGCCGAAGACAAGCTTGAGCTTTACAAATGTGGAAATCAGTGCCCGAAAAATtacaAATGCGGTCACAGGTGCATCGAAAATTGTCATCCAGGTATCTGCCAGAAGGAAGaactttgtaacaaaaaagtaaaagtctGGTGCAGATGTAAAAGAATAAAGAAGGAATTTTCCTGCAAGGTTATCCGTGCCGGACAGGCTGTGGTGAGCTGCGACGAGGTGTGCAAGCAGAAAATATCCGAGATTGAGAAAATCAAAGCGGAAGCTCTtgcgaagaagaagaaagaagagGAGCTGAAGAATCAGAAGGAGATCGAACAGTTTGAGAGGAAGTTCAAGCCGAAAAAGAAAGGTCGAGACCGGCACaggtttgaacaaaattcagaCGATGGTAACTCGAACCTTTACCGCGTGTTAGTGACTTCTTTTGTGATCATCCTGGCTTCGGTGATAAGCCTTTTCTATTATACCAACTACGTACTAGCTTAA
- Protein Sequence
- MKRFKRAQALDRAAIKKHLEANSIVYSSSDDEDLNEETLQQTVDKVFVNYQNDGADTEKILSYLTDVCHSGASICLVCISSVKKGDAIWSCSTCYTFLHLPCIQHWIRDSLTYKKEKGIKPVWACPKCRMEYEESEIPSRYYCFCGKTEDPPYQPWNLPHSCGELCGKLLQPKCGHKCTLLCHPGPCPPCPKIVLTACYCKKQSEEPRRCSSKEWSCGSACGRTLSCGHACQAPCHPGSCPPCSETSNVSCNCGARKEVKLCSERDWKCERACNRKLNCNVHSCEGFCHRQADCGPCPFEKNRTCPCGKKKYAISCKQQTTPTCGDTCGKLLDCKAHFCNMRCHADKCGQCIQVVKKNCRCESFSKEVACGKEFHCNRKCTQMRLCGRHPCNKKCCDCLIKNNFNICEKTCDNTLNCRKHKCSAPCHSGPCYPCPRTVVIQCRCGGSKITVPCGTVKKIKPPPCNRLCKIPPICHHPKRESHKCHQGACPPCKKVCAIKLRCGHTCPAVCHTKVWIKVKINGVTQPVGPWDTPQEKWEQKTLPCPPCEVSVMVSCLGEHECKPWPCHQAKPTSCLRECGKLLACSNHNCEKLCHKIDEGCLECEKPCGLARPVGCTHSCDKICHPAPCAPCRQMVKVQCHCAINVLYIRCSVLTSASAEDKLELYKCGNQCPKNYKCGHRCIENCHPGICQKEELCNKKVKVWCRCKRIKKEFSCKVIRAGQAVVSCDEVCKQKISEIEKIKAEALAKKKKEEELKNQKEIEQFERKFKPKKKGRDRHRFEQNSDDGNSNLYRVLVTSFVIILASVISLFYYTNYVLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01493273;
- 90% Identity
- iTF_01493273;
- 80% Identity
- -