Basic Information

Insect: Trissolcus japonicus
Gene Symbol: -
Assembly: GCA_030522925.1
Location: JAPYZS010001609.1:12031-17315[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.94 1e+02 4.2 0.4 1 17 54 70 54 71 0.90

2 21 1.9 2.1e+02 3.3 1.3 2 23 251 273 251 273 0.96

3 21 0.061 6.6 8.0 4.9 1 23 351 373 351 373 0.98

4 21 0.098 11 7.3 0.2 1 23 422 444 422 444 0.98

5 21 0.0084 0.92 10.7 1.9 1 20 481 500 481 502 0.94

6 21 2.5 2.8e+02 2.9 2.1 1 23 514 537 514 537 0.94

7 21 5.7 6.2e+02 1.8 1.7 2 23 543 564 542 564 0.95

8 21 0.0011 0.12 13.5 0.2 1 23 587 609 587 609 0.97

9 21 0.00091 0.099 13.7 0.3 1 23 615 637 615 637 0.97

10 21 4.7e-05 0.0052 17.8 0.4 2 23 686 708 686 708 0.96

11 21 0.0003 0.033 15.2 0.2 3 23 715 736 713 736 0.95

12 21 0.61 67 4.8 5.5 2 21 763 782 762 785 0.88

13 21 0.0012 0.13 13.4 1.6 1 23 800 822 800 822 0.95

14 21 0.0076 0.83 10.8 0.2 2 20 884 902 883 902 0.95

15 21 0.018 2 9.7 0.1 2 23 922 943 921 943 0.96

16 21 4.2e-05 0.0046 17.9 4.1 1 23 976 998 976 998 0.98

17 21 0.00041 0.045 14.8 0.1 2 20 1018 1036 1018 1038 0.92

18 21 0.0032 0.35 12.0 0.1 2 23 1118 1140 1117 1140 0.93

19 21 0.3 33 5.8 0.1 3 23 1159 1182 1157 1182 0.84

20 21 0.61 67 4.8 2.0 1 23 1187 1210 1187 1210 0.88

21 21 0.019 2.1 9.5 0.8 2 23 1243 1265 1243 1265 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.94	1e+02	4.2	0.4	1	17	54	70	54	71	0.90
2	21	1.9	2.1e+02	3.3	1.3	2	23	251	273	251	273	0.96
3	21	0.061	6.6	8.0	4.9	1	23	351	373	351	373	0.98
4	21	0.098	11	7.3	0.2	1	23	422	444	422	444	0.98
5	21	0.0084	0.92	10.7	1.9	1	20	481	500	481	502	0.94
6	21	2.5	2.8e+02	2.9	2.1	1	23	514	537	514	537	0.94
7	21	5.7	6.2e+02	1.8	1.7	2	23	543	564	542	564	0.95
8	21	0.0011	0.12	13.5	0.2	1	23	587	609	587	609	0.97
9	21	0.00091	0.099	13.7	0.3	1	23	615	637	615	637	0.97
10	21	4.7e-05	0.0052	17.8	0.4	2	23	686	708	686	708	0.96
11	21	0.0003	0.033	15.2	0.2	3	23	715	736	713	736	0.95
12	21	0.61	67	4.8	5.5	2	21	763	782	762	785	0.88
13	21	0.0012	0.13	13.4	1.6	1	23	800	822	800	822	0.95
14	21	0.0076	0.83	10.8	0.2	2	20	884	902	883	902	0.95
15	21	0.018	2	9.7	0.1	2	23	922	943	921	943	0.96
16	21	4.2e-05	0.0046	17.9	4.1	1	23	976	998	976	998	0.98
17	21	0.00041	0.045	14.8	0.1	2	20	1018	1036	1018	1038	0.92
18	21	0.0032	0.35	12.0	0.1	2	23	1118	1140	1117	1140	0.93
19	21	0.3	33	5.8	0.1	3	23	1159	1182	1157	1182	0.84
20	21	0.61	67	4.8	2.0	1	23	1187	1210	1187	1210	0.88
21	21	0.019	2.1	9.5	0.8	2	23	1243	1265	1243	1265	0.94

Sequence Information

Coding Sequence: ATGGACAGCTCCGAGGAGATGCCGAACCTGGAAAGTGTCTGCAGGCTGTGCCTGGCCGCGGACGAGACCAAGGCGCCGATCCTCGCCACGGCTTCGCTTGCTGACAAGATCCAAGCTTACTTATCCATTCAGGTCACAGCGAATGATCGAATCTCTACCTTCATCTGCTCAAAGTGTACGAAAGAAGTCAACAGATGGCATTCTTATCGAGAGTCCTGTCAACGTTCTCAAGACAAGTTACAGCAGTGGTTATCAAAACAAACGTCATGCAACCAAAcgCAGATACAGATCAAAGACGAACCAGTCGATTTGGATGATATGGACAACGTTGAGATTCTATCAGAACCCGATGAACGGAATCTAGTCGAGATTGACACAGTGACATTAGAAGTTAACGGAGATGTAACTTCCGACGAACAGAATGCCTTAGAGAAGGAGCCTGAAAATGACCCCGCTTTGTCTCGAAGTCGGCTGAACGATACAAACTGTTCTATTAACCGGCCAACCCTGGTCAACATCAAGTCGGAGCCGTTGTCCGAGGAAGATGAAGACTCGACGATGGACACGGAATCCATATCCGACACAGCCGAACTGGTGCCTAATCCAATGGCGATCGCCAAAGCCAAAGAGAGTGGTAGCGTGATGGAAGCCGACTCCACGCAAAAGTATCACGCAACGTCTTCAATGAGAGGCAAGAAAAAGATACGCCGATTCAGGACTCACTTCCACAACAAGAAAGTATACAAGCGCAAGTGCCCCAACTGTTCAATCTACCTGCACTCGAAGTGGGCGTACGACAAGCACATGGAGCGGTTCCACAACGTCATGAGTAGCGGTTCGCCTGCTGAAACGAAATCCAAAACCTTGCCGGCTTCcaagacaattaaaaaagcaaaGGCCGTACTACCGTCGCGAATGTCCGCGCGCATCGCGGAGGCCACTTTACAGCAGCTTGAGATCGAAGCCAACACGGGCGAAGTTGAGGAGGACCAAGAGTCCGAGCTTGGACTGACGTCGATGCAGCTGAACATCATTAGTCAGCTCAAAACTTATTCCTGCTACACTTGCCAGCAACACTTCTCCGACCGGCGCACCACGTTGAATCACATCCGACAGCACGCTCCCGACCTGAGGTCGTACACCTGCATCGCCTGCCTGACTGAATTCGGCGACCGATCGCTATATAAGATGCACTGCAGCGACTCCCTCGAATGCGCGATGAAGATCGCACAGGTCGTCCCTAAGTTCGGCACGGAGAAGTACTTCACGTGCAACATGTGTCTGGAGGCGTTGCAGAATCGTCAGGAGTTGTTGCTGCACATCTCACGTCACGCGAACAGCGTACAAAACTCGAACAACCAGAGCCCAAGCAAGCAGAATCAATCGTTCTCCAAGCCGGACATCCCCAGTCCGTACATGCACGGCGATCCCATCCACAATCACGAGTGCGATCTCTGCGGCATGATCTACAAGCACAAGATCAACATGCAGAAACACAGGGAGCATTGCTTACAGCTGCCCGAGAGGGCTCGCACTTCTTACCGCTGCATCCACTGTGGTATGACGTTCCTAGTGTACAAAAAGTTCCAGAGCCACTTGGCCACGGAACACAGGCGCAAAGACTTGCCCTGCCAGAACTGCAGTCACATCTCGTACTCTGCGGAGGAATTCCTCATGCACCACGACACCCACCGGGTGTTCCATGACGAGGAACCCGACGACGAGCCAGCTGAGAACGAGGATTCCCGCGGGAAGGCTTACAACTGTGCCCTCTGCGATGAAAGTTTTAACGACCTTGCCGATTACACTGAACATCGTAACTTGCATCTGAAGGTTAAAATCTATTCGTGCGTGATTTGTCGCAGCATGTTCAGCAGCGCGCAGACGTTGGAGGTGCACATGAAGGACCACGGAATCCACGATTCCAGCCAACAGCAGAACACCCACCATTCGTTTAACGAGGACTACATGGACGATGAATCGGACAGCGACTACGCGGACGCGGATGGGGACGCAGACGCCTCGTCGGTGTCTGACCCGGGTGGTCAGATGCCACGCTGTCCCGAGTGCGGCAACAGCTTTGCTAATACAAACAACGTAACTAGACATATGAAGAACGTGCACCGCCTGGAGAGGTCGATCTGCAACCAGTGCTACGAGGTGTTCATAACCAAAGACCAGCTCAACGACCACATAACTTCTGTCCACATGGTCCAAGTTGGTCAGAGCAAGCCGCCACCTATCAAGCCGGTTCAGAATAAGATTCCATCGCAGAGGCCCATTCTCAAGTGCCCGCAGTGCTTCAAAGTTTATTACTACGAGTCCGCCTTGCACCACCATTGCAAAAATGTCCACGGGTTCAACTACGATGCACGTGCTGCTCAAAAACCAGTTTCCTACAAGTGCGAGGTCTGTAACAAAACCTTCAAGGAGGAATTCTCTATGCGCATCCACAAAACTTGGCACTACCGTGCGGATTCCAGACTCGCCCGGGGCATGCCCAATTCCAAACTCAGTCCAGTTAAGGTCAAGGAGCCCCAGCAGACGACCAGCCCGGCCCCGGCCAGCACTCCGAAACCTGCGAAGGCCAGGAAGTCGTTCCCTAACGCGCCCAAGTTACCCAACACCAGCCCGAAATACCAGAGCATTCAGTGCCAAGTCTGTGACAACAAATTCTCGGACGTGACAGAGCTGCGCAAACATTTGTGGGAGGTTCACTGTGCTAAGGGCAAACAGGAGAAACCGTTCATCATGAATGACTTGCAGTGCGAGCTGTGCACAAACATCTTCGACGACCAGGAGAGCTTGGACGAGCACATGGAGTGGCACCGAGCCAATCCTATCCTGAGCAACAATGTCACGCCGCAGTCACAGGCCAAAGAACAGTCGCCTGCTCCAGCGCCAGCTCCTGTTCACGCGTCTACCTTCACCTGCGGCATCTGTCACAAAGTTTATTCGTCAAAGAAAATGCTCTACAAGCATAAACGAATTCACAAGGTCCCGATAGTTCTGGGATCGAAATTGCATAGCATGCAACTTAAAAAGATGGCCGTTTGTGGTACTTGTAACAAGGCTTTCTCAACAACGGGTAACCTTGCTAAACATCGAGCCATGACTGGATGCGGCATGAATGTAATGAAGATGAAGAAAGAAGCAGGTCAGCCCGAAGTGGAAGCACCGAAGAAGAAACAAGTGCACTGTCTTATCTGTAAATCCAGTTTTCCAAGTATGCGCATACTTTACCAGCACAAACAAATGGTgcacaacaaaaacaatcagaTGAAACTCCCTACAAAAACTCAAGGCCCAGTTCCCAATCTCGTTGCTCTCACCGACAACCATCCTGGCGTCATGTGCAATGTCTGCGGCAAACGATTCAACGGCATCCCGGCGTTGAAGCAACATTACACGATCAAACACAAGCCGAATAGACCAACCAACAAGGTCCAGAAGAATGCTAAGGGCAGACTGGTTTgtttgacgaaaaattgtcGCCAGGAGTTTCCGGATCAAGAAGCTCTTTCTAGACACGAGCTTGAGAATCATTCGAACATCTTATACAGCTGCCAGATGTGCGAGCGCCACTTCTTCGATAAGAGCATAATTGTGAAACACGTTCAGAATACCCACAAAGCCGGGTACCAAGAGGGTGTTACAAACTCGATCGACTTTTTCGAGGAGATCGACCTCAACGCGTACGAAATTGAGAACTTATCTAATCCTCGTGAGTGCCCCGTGTGCCACGTCAGGTACCCAAATACCAAGGCCTTGAAGATCCATTATTACAAGTTCCATGATAAAGGTTTTCAGTAA
Protein Sequence: MDSSEEMPNLESVCRLCLAADETKAPILATASLADKIQAYLSIQVTANDRISTFICSKCTKEVNRWHSYRESCQRSQDKLQQWLSKQTSCNQTQIQIKDEPVDLDDMDNVEILSEPDERNLVEIDTVTLEVNGDVTSDEQNALEKEPENDPALSRSRLNDTNCSINRPTLVNIKSEPLSEEDEDSTMDTESISDTAELVPNPMAIAKAKESGSVMEADSTQKYHATSSMRGKKKIRRFRTHFHNKKVYKRKCPNCSIYLHSKWAYDKHMERFHNVMSSGSPAETKSKTLPASKTIKKAKAVLPSRMSARIAEATLQQLEIEANTGEVEEDQESELGLTSMQLNIISQLKTYSCYTCQQHFSDRRTTLNHIRQHAPDLRSYTCIACLTEFGDRSLYKMHCSDSLECAMKIAQVVPKFGTEKYFTCNMCLEALQNRQELLLHISRHANSVQNSNNQSPSKQNQSFSKPDIPSPYMHGDPIHNHECDLCGMIYKHKINMQKHREHCLQLPERARTSYRCIHCGMTFLVYKKFQSHLATEHRRKDLPCQNCSHISYSAEEFLMHHDTHRVFHDEEPDDEPAENEDSRGKAYNCALCDESFNDLADYTEHRNLHLKVKIYSCVICRSMFSSAQTLEVHMKDHGIHDSSQQQNTHHSFNEDYMDDESDSDYADADGDADASSVSDPGGQMPRCPECGNSFANTNNVTRHMKNVHRLERSICNQCYEVFITKDQLNDHITSVHMVQVGQSKPPPIKPVQNKIPSQRPILKCPQCFKVYYYESALHHHCKNVHGFNYDARAAQKPVSYKCEVCNKTFKEEFSMRIHKTWHYRADSRLARGMPNSKLSPVKVKEPQQTTSPAPASTPKPAKARKSFPNAPKLPNTSPKYQSIQCQVCDNKFSDVTELRKHLWEVHCAKGKQEKPFIMNDLQCELCTNIFDDQESLDEHMEWHRANPILSNNVTPQSQAKEQSPAPAPAPVHASTFTCGICHKVYSSKKMLYKHKRIHKVPIVLGSKLHSMQLKKMAVCGTCNKAFSTTGNLAKHRAMTGCGMNVMKMKKEAGQPEVEAPKKKQVHCLICKSSFPSMRILYQHKQMVHNKNNQMKLPTKTQGPVPNLVALTDNHPGVMCNVCGKRFNGIPALKQHYTIKHKPNRPTNKVQKNAKGRLVCLTKNCRQEFPDQEALSRHELENHSNILYSCQMCERHFFDKSIIVKHVQNTHKAGYQEGVTNSIDFFEEIDLNAYEIENLSNPRECPVCHVRYPNTKALKIHYYKFHDKGFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01493091;
90% Identity: iTF_01493091;
80% Identity: -