Basic Information

Insect: Trissolcus brochymenae
Gene Symbol: -
Assembly: GCA_030523145.1
Location: JAQQRF010000425.1:89724-95020[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.87 96 4.2 0.4 1 17 54 70 54 71 0.90

2 21 1.4 1.5e+02 3.6 1.5 2 23 251 273 251 273 0.96

3 21 0.056 6.2 8.0 4.9 1 23 351 373 351 373 0.98

4 21 0.09 10 7.3 0.2 1 23 422 444 422 444 0.98

5 21 0.0078 0.87 10.7 1.9 1 20 483 502 483 504 0.94

6 21 2.3 2.6e+02 2.9 2.1 1 23 516 539 516 539 0.94

7 21 0.48 53 5.1 1.1 2 23 545 566 544 566 0.96

8 21 0.0011 0.12 13.4 0.2 1 23 589 611 589 611 0.97

9 21 0.00084 0.093 13.7 0.3 1 23 617 639 617 639 0.97

10 21 4.4e-05 0.0048 17.8 0.4 2 23 688 710 688 710 0.96

11 21 0.00022 0.025 15.5 0.2 3 23 717 738 715 738 0.95

12 21 0.56 62 4.8 5.5 2 21 765 784 764 787 0.88

13 21 0.0011 0.12 13.3 1.6 1 23 802 824 802 824 0.95

14 21 0.007 0.78 10.8 0.2 2 20 886 904 885 904 0.95

15 21 0.017 1.8 9.7 0.1 2 23 924 945 923 945 0.96

16 21 3.6e-05 0.0041 18.0 4.1 1 23 978 1000 978 1000 0.98

17 21 0.0002 0.022 15.7 0.1 2 20 1020 1038 1020 1040 0.93

18 21 0.0029 0.33 12.0 0.1 2 23 1120 1142 1119 1142 0.93

19 21 0.37 42 5.4 0.2 5 23 1165 1184 1160 1184 0.85

20 21 0.57 63 4.8 2.0 1 23 1189 1212 1189 1212 0.88

21 21 0.018 2 9.5 0.8 2 23 1245 1267 1245 1267 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.87	96	4.2	0.4	1	17	54	70	54	71	0.90
2	21	1.4	1.5e+02	3.6	1.5	2	23	251	273	251	273	0.96
3	21	0.056	6.2	8.0	4.9	1	23	351	373	351	373	0.98
4	21	0.09	10	7.3	0.2	1	23	422	444	422	444	0.98
5	21	0.0078	0.87	10.7	1.9	1	20	483	502	483	504	0.94
6	21	2.3	2.6e+02	2.9	2.1	1	23	516	539	516	539	0.94
7	21	0.48	53	5.1	1.1	2	23	545	566	544	566	0.96
8	21	0.0011	0.12	13.4	0.2	1	23	589	611	589	611	0.97
9	21	0.00084	0.093	13.7	0.3	1	23	617	639	617	639	0.97
10	21	4.4e-05	0.0048	17.8	0.4	2	23	688	710	688	710	0.96
11	21	0.00022	0.025	15.5	0.2	3	23	717	738	715	738	0.95
12	21	0.56	62	4.8	5.5	2	21	765	784	764	787	0.88
13	21	0.0011	0.12	13.3	1.6	1	23	802	824	802	824	0.95
14	21	0.007	0.78	10.8	0.2	2	20	886	904	885	904	0.95
15	21	0.017	1.8	9.7	0.1	2	23	924	945	923	945	0.96
16	21	3.6e-05	0.0041	18.0	4.1	1	23	978	1000	978	1000	0.98
17	21	0.0002	0.022	15.7	0.1	2	20	1020	1038	1020	1040	0.93
18	21	0.0029	0.33	12.0	0.1	2	23	1120	1142	1119	1142	0.93
19	21	0.37	42	5.4	0.2	5	23	1165	1184	1160	1184	0.85
20	21	0.57	63	4.8	2.0	1	23	1189	1212	1189	1212	0.88
21	21	0.018	2	9.5	0.8	2	23	1245	1267	1245	1267	0.94

Sequence Information

Coding Sequence: ATGGACAACTCCGAGGAAATGCCGAACCTGGAAAGTGTCTGCCGGCTGTGTCTCGCCGCGGACGAGACCAAGTCGCCAATCCTCGCCACGGCTTCGCTTGCTAACAAGATCCAAGCTTACTTATCCATTCAGGTCACAGCGAATGATCGAATCTCTACCTTCATCTGCTCAAAGTGTACGAAAGAAGTCAACAGATGGCATTCTTATCGAGAATCTTGTCAACGTTCTCAAGAAAAGTTACAACAATGGTTATCGAAACAAACGTCATGCAACCAAAcgcagatacaaataaaagatgaacCAGTTGATCTGGATGATATGGACAATGTTGAGATACTATCAGAACCCGATGATCGGAATCTAGTCGAGATTGATACAGTGACACTAGAAGTTAACGGAGAGGTAACTTCTGATGAACAAAATGCCTTAGAGAAGGAACCTGAAACTGACTCAGCTTTGTCTCGAAGCCGACTCAATGATACAAACTGTTCTACCAACCGACCGACACTGGTTAATATTAAGTCCGAGCCGGTGTCCGAGGAAGATGAAGACTCGACAATGGACACAGAATCCATATCTGACACAGCCGAACTGGTGCCGAATCCGATGGCGATCGCCAAAGCCAAAGAGAGTGGTAGTGTGATGGAAGCCGACTCCACGCAAAAGTATCATGCAACGTCATCAATGAGAGGCAAGAAAAAGATACGCCGATTCAGGACTCACTTccataacaaaaaagtatacaagCGCAAGTGTCCTAACTGTTCGATCTACCTGCACTCGAAGTGGGCATTTGACAAACACATGGAACGGTTCCACAACATCATGAGTAGCGGTTCGCCTGTGGaaacaaaatccaaaatcATGCCGGCTTCtaagacaattaaaaaatcaaaggCCGTGCTGCCGTCGCGAATGTCCGCGCGCATCGCGGAGGCCACTTTGCAGCAGCTAGAAAATGAAGCCAATACGGGTGAAGTTGAGGAAGACCAAGAGTCCGAGCTTGGACTGACGTCGATGCAGCTGAATATCATTAGTCAGCTCAAAACTTATTCCTGCTACACTTGCCAGCAACATTTCTCCGACCGACGAACCACGTTGAATCACATCCGACAGCATGCTCCCGACCTGAGGTCGTACACCTGCATCGCCTGCTTAACTGAATTTGGTGACCGATCGCTCTACAAGATGCACTGCAGCGACTCCCTCGAGTGTGCGATGAAGATTGCACAAGTCGTTCCCAAGTTCGGGACGGAGAAGTACTTCACGTGCAACATGTGTCTCGAAGCTTTACAGAATCGTCAAGAGTTGCTGCTGCATATCTCACGTCACGCGAACATTGCTCCAAACTCGAACAATCAGAGTCTGAGCCCGAGCAAGCAGAATCAATCGTTCTCTAAACCAGACATCCCGAGTCCGTACATGCACGGCGATCCTATCCACAATCACGAGTGCGACCTCTGTGGCATGATTTACAAGCACAAGATCAACATGCAGAAACACAGGGAGCACTGCCTGCAGCTTCCTGAGAGAGCTCGCACCTCTTACCGCTGCATCCACTGTGGTATGACGTTCCTAGTGTACAAAAAGTTCCAGAGCCATTTGGCAACGGAGCACAGGCGTAAAGACTTGCCCTGTCAGAACTGCGGTCACATCTCCTACTCTGCAGAGGAATTTCTCATGCACCATGATACTCATCGGGTGTTTCACGACGAGGAACCCGATGACGAACCAGCTGAGAACGAAGATTCCCGTGGAAAGTCTTACAACTGTGCCCTTTGCGATGAAACTTTCAACGACCTTGCAGATTACACTGAACATCGTAACTTGCATCTGAAAGTTAAAATCTATTCATGCGTGATTTGTCGCAGTATGTTCAGTAGCGCTCAGACATTGGAGGTGCACATGAAGGACCACGGTATTCATGATTCTAACCAACAGCAGAACACCCATCACTCGTTCGATGAGGACTACATGGACGATGACTCAGACAGTGACTACGCGGACGCAGACGCGGACGCGGATGCCTCGTCGGTGTCAGATCCGGGTGGTCAGATGCCTCGTTGTCCCGAGTGCGGTAACAGCTTTGCCAACACGAACAATGTAACCAGACATATGAAGAATGTGCATCGCCTGGAGAGGTCCATCTGCAATCAGTGCTACGAGGTGTTCGTTACCAAAGACCAGCTCAACGACCACATAACGTCTGTCCATATGGTCCAAGTTGGTCAGAGCAAGCCACCACCGATGAAGCCAGTTCAGAGCAAGATTCCATCGCAGCGACCAATTCTCAAGTGCCCGCAGTGCTTCAAGGTTTATTACTACGAATCCGCCTTGCACCACCATTGCAAAAATGTCCACGGGTTCAACTATGATACCCGTGTTGCTCAAAAACCAGTTTCCTACAAGTGCGAGGTTTGTAACAAAACTTTCAAAGAGGAATTCTCCATGCGTATCCACAAAACTTGGCACTACCGTGCAGATTCCAGACTCGCTCGGGGCATGCCCAATTCGAAGCTCAGCCCAGTTAAGATCAAGGAACCCCAACAGGCGAACAACCCGGCACCAGTGAGCGTTCCGAAACCTGCGAAGGCCAGGAAGTCGTTCCCCAACGCACCCAAGTTACCCAACACCAGCCCGAAATACCAGAGCATTCAGTGCCAAGTTTGTGACAACAAATTCTCGGACGTAACAGAGCTGCGCAAACATTTGTGGGAGGTTCACTGTGCTAAGGGCAAACAGGAAAAACCGTTCATCATAAATGACTTGCAGTGCGAGCTCTGCACAAACATCTTCGACGACCAGGAGAGCTTGGACGAGCACATGGAGTGGCACAGAGCGAACCCTATCCTGAGCAACAATGTGACGCCGCAGCCACAGGCCAAAGAACAGCCGCCTGCTCAAACGCCAGCTCCCGCACACGCGTCTACCTTCACTTGTGGTATCTGTCACAAAGTTTATTCAACTAAGAGAATGCTGTACAAGCATAAACGAATTCACAAGGTCCCGATAGTACTGGGATCAAAACTACATAGCATGCAGCTCAAAAAGATGGCTGTTTGTAGTACTTGTAACAAGGCTTTCTCAACAACGGGTAACCTTGCTAAACATCGAGCCATGACTGGATGCGGTAtgaatgtaatgaaaatgaagaaagaagCAGGTCAGCCCGAAGTGGAAGTACCCAAGAAGAAACCAGTGCACTGTCTTATCTGTAAATCCAGTTTTCCAAGCATGCGCATACTTTACCAGCACAAACAAATGGTgcacaacaaaaacaatcagaTGAAACTCACGACAAAAACTCAAGGCCCAGTTCCCAATCTCGTTGCTCTCACCGACAACCATCCTGGTGTCATGTGCAATGTCTGCGGCAAACGTTTCAATGGTATCCCGGCTTTAAAACAACATTACACGATCAAACACAAGCCAAACAGACCGGCCAACAAGGTCCAGAAGAATGCTAAGGGCAGTCTCATTTGTTTGACGAAAAATTGTCGCCAGGAATTTCCGGATCAAGAAGCTCTCTCTAGACATGAGCTTGAGAACCATTCGAACATCTTATACAGCTGCCAGATGTGCGAACGCCACTTCTTTGATAAGAGCATAATTGTAAAACACGTTCAGAACACCCACAAAGCCGGGTACCAAGAGGGTGTTACAAGCTCAATCGACTTTTTCGAGGAGATCGACCTAAACGCGTATGAAATTGAGAATCTGTCTAATCCTCGTGAGTGCCCTGTGTGCCACGTCAGGTACCCCAATACCAAGGCCTTGAAGATCCATTATTACAAGTTCCATGATAAAGGTTTTCAGTAA
Protein Sequence: MDNSEEMPNLESVCRLCLAADETKSPILATASLANKIQAYLSIQVTANDRISTFICSKCTKEVNRWHSYRESCQRSQEKLQQWLSKQTSCNQTQIQIKDEPVDLDDMDNVEILSEPDDRNLVEIDTVTLEVNGEVTSDEQNALEKEPETDSALSRSRLNDTNCSTNRPTLVNIKSEPVSEEDEDSTMDTESISDTAELVPNPMAIAKAKESGSVMEADSTQKYHATSSMRGKKKIRRFRTHFHNKKVYKRKCPNCSIYLHSKWAFDKHMERFHNIMSSGSPVETKSKIMPASKTIKKSKAVLPSRMSARIAEATLQQLENEANTGEVEEDQESELGLTSMQLNIISQLKTYSCYTCQQHFSDRRTTLNHIRQHAPDLRSYTCIACLTEFGDRSLYKMHCSDSLECAMKIAQVVPKFGTEKYFTCNMCLEALQNRQELLLHISRHANIAPNSNNQSLSPSKQNQSFSKPDIPSPYMHGDPIHNHECDLCGMIYKHKINMQKHREHCLQLPERARTSYRCIHCGMTFLVYKKFQSHLATEHRRKDLPCQNCGHISYSAEEFLMHHDTHRVFHDEEPDDEPAENEDSRGKSYNCALCDETFNDLADYTEHRNLHLKVKIYSCVICRSMFSSAQTLEVHMKDHGIHDSNQQQNTHHSFDEDYMDDDSDSDYADADADADASSVSDPGGQMPRCPECGNSFANTNNVTRHMKNVHRLERSICNQCYEVFVTKDQLNDHITSVHMVQVGQSKPPPMKPVQSKIPSQRPILKCPQCFKVYYYESALHHHCKNVHGFNYDTRVAQKPVSYKCEVCNKTFKEEFSMRIHKTWHYRADSRLARGMPNSKLSPVKIKEPQQANNPAPVSVPKPAKARKSFPNAPKLPNTSPKYQSIQCQVCDNKFSDVTELRKHLWEVHCAKGKQEKPFIINDLQCELCTNIFDDQESLDEHMEWHRANPILSNNVTPQPQAKEQPPAQTPAPAHASTFTCGICHKVYSTKRMLYKHKRIHKVPIVLGSKLHSMQLKKMAVCSTCNKAFSTTGNLAKHRAMTGCGMNVMKMKKEAGQPEVEVPKKKPVHCLICKSSFPSMRILYQHKQMVHNKNNQMKLTTKTQGPVPNLVALTDNHPGVMCNVCGKRFNGIPALKQHYTIKHKPNRPANKVQKNAKGSLICLTKNCRQEFPDQEALSRHELENHSNILYSCQMCERHFFDKSIIVKHVQNTHKAGYQEGVTSSIDFFEEIDLNAYEIENLSNPRECPVCHVRYPNTKALKIHYYKFHDKGFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01493813;
90% Identity: iTF_01493813;
80% Identity: -