Basic Information

Insect: Trissolcus japonicus
Gene Symbol: -
Assembly: GCA_030522925.1
Location: JAPYZS010000416.1:18915-29762[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 6.7e-06 0.00073 20.4 1.0 1 23 219 241 219 241 0.98

2 27 0.0046 0.51 11.5 1.3 1 23 264 287 264 287 0.96

3 27 0.00017 0.019 16.0 0.8 2 23 294 316 293 316 0.96

4 27 0.00028 0.031 15.3 0.8 1 22 334 355 334 355 0.96

5 27 0.0038 0.42 11.8 0.1 3 23 448 468 447 468 0.98

6 27 2.6e-05 0.0028 18.6 0.5 1 23 474 497 474 497 0.98

7 27 6.3 6.9e+02 1.6 0.2 1 23 571 594 571 594 0.81

8 27 0.034 3.7 8.8 1.1 2 23 601 624 601 624 0.93

9 27 3.3 3.6e+02 2.5 0.0 2 23 633 655 633 655 0.84

10 27 0.043 4.8 8.4 0.1 3 23 663 684 662 684 0.95

11 27 3.8e-06 0.00042 21.2 1.2 1 23 692 714 692 714 0.98

12 27 1.2 1.3e+02 4.0 0.8 3 23 763 785 761 785 0.87

13 27 0.00014 0.015 16.3 1.4 1 23 788 811 788 811 0.96

14 27 0.0025 0.27 12.4 1.2 2 23 818 840 817 840 0.96

15 27 0.0014 0.16 13.1 2.7 1 21 867 887 867 888 0.96

16 27 0.0029 0.32 12.2 1.8 2 23 902 923 901 924 0.93

17 27 0.33 36 5.7 0.9 1 23 927 950 927 950 0.94

18 27 0.005 0.55 11.4 1.0 2 23 957 980 956 980 0.94

19 27 0.71 78 4.6 0.1 2 23 988 1010 988 1010 0.94

20 27 0.24 26 6.1 2.7 2 23 1048 1070 1048 1070 0.96

21 27 0.085 9.3 7.5 1.7 2 23 1076 1098 1075 1098 0.94

22 27 0.022 2.4 9.4 0.2 1 23 1165 1188 1165 1188 0.96

23 27 0.00012 0.013 16.5 1.4 1 21 1211 1231 1211 1232 0.95

24 27 0.14 16 6.8 1.2 2 23 1351 1373 1350 1373 0.94

25 27 0.094 10 7.4 0.3 2 23 1380 1402 1379 1402 0.96

26 27 0.21 23 6.3 2.1 1 23 1413 1435 1413 1435 0.97

27 27 0.065 7.2 7.9 0.1 3 22 1444 1463 1444 1463 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	6.7e-06	0.00073	20.4	1.0	1	23	219	241	219	241	0.98
2	27	0.0046	0.51	11.5	1.3	1	23	264	287	264	287	0.96
3	27	0.00017	0.019	16.0	0.8	2	23	294	316	293	316	0.96
4	27	0.00028	0.031	15.3	0.8	1	22	334	355	334	355	0.96
5	27	0.0038	0.42	11.8	0.1	3	23	448	468	447	468	0.98
6	27	2.6e-05	0.0028	18.6	0.5	1	23	474	497	474	497	0.98
7	27	6.3	6.9e+02	1.6	0.2	1	23	571	594	571	594	0.81
8	27	0.034	3.7	8.8	1.1	2	23	601	624	601	624	0.93
9	27	3.3	3.6e+02	2.5	0.0	2	23	633	655	633	655	0.84
10	27	0.043	4.8	8.4	0.1	3	23	663	684	662	684	0.95
11	27	3.8e-06	0.00042	21.2	1.2	1	23	692	714	692	714	0.98
12	27	1.2	1.3e+02	4.0	0.8	3	23	763	785	761	785	0.87
13	27	0.00014	0.015	16.3	1.4	1	23	788	811	788	811	0.96
14	27	0.0025	0.27	12.4	1.2	2	23	818	840	817	840	0.96
15	27	0.0014	0.16	13.1	2.7	1	21	867	887	867	888	0.96
16	27	0.0029	0.32	12.2	1.8	2	23	902	923	901	924	0.93
17	27	0.33	36	5.7	0.9	1	23	927	950	927	950	0.94
18	27	0.005	0.55	11.4	1.0	2	23	957	980	956	980	0.94
19	27	0.71	78	4.6	0.1	2	23	988	1010	988	1010	0.94
20	27	0.24	26	6.1	2.7	2	23	1048	1070	1048	1070	0.96
21	27	0.085	9.3	7.5	1.7	2	23	1076	1098	1075	1098	0.94
22	27	0.022	2.4	9.4	0.2	1	23	1165	1188	1165	1188	0.96
23	27	0.00012	0.013	16.5	1.4	1	21	1211	1231	1211	1232	0.95
24	27	0.14	16	6.8	1.2	2	23	1351	1373	1350	1373	0.94
25	27	0.094	10	7.4	0.3	2	23	1380	1402	1379	1402	0.96
26	27	0.21	23	6.3	2.1	1	23	1413	1435	1413	1435	0.97
27	27	0.065	7.2	7.9	0.1	3	22	1444	1463	1444	1463	0.95

Sequence Information

Coding Sequence: ATGGCCCTGCACGAAGCTCGTTACGACGAGCTGTGCAGGCTCTGCGCGAGCTACGACGCCACCAGAATCAACCTCTTCGGACAGGAGGGACGGAACAGGCAGCTCGTCCTCAAAATCCAAACCTGTCTACCATTCGAGGTGGTTGAAGAGGATCCACTACCGAAAGCCGTGTGTTTTCGATGCCtttataatttggaaaatttttacgaCTTTAGAACCATTTGCATCAATGCATTGTCCATGCTGCAGAGGTGCTTGCCACCGGAGTTTGAAAACAAAAATGGAGCAGATCGAAATCGCGGGAACCATTACAGTTGCCTGCAAACTGAGTACCTcaaagaaaaggaaaacatGCCAATACTTATCCCGGAAGCCCCCATAGTGAATCCAAATGCAGCTTTGGGAACACCGCCACGACTTAATTCCGACGGAGAAGCCGAGCATGATATTGAAGAAGTCAATCAGAGTGGGACAGAAGAAGgTTGTGACGATGTGGACGACCACAAGTCGGAAGATTATGAGATGGACATGGAGACCAACCCGAGTGACTTTTTGGAGCTGACATCTAGCGTTCCCGAGGACGCGGACGACAGTGTTGCAAAGCAGGAAGCGGTGGCTGTGTTGCAAAACAGAAACGAACAGCAACATGAGGTTTACGTCTGTTCGCTGTGTAACAAGGCTTTCAGCTCCAAAGGTCACTTGTCCCTTCATGCGCGGATACACGTTGGCGCGGGCGACGTGATAGGCGAAAAAGTTATCACCAATGATCATACCTCGTATAAAAGACCCTACCAATGCGATCTCTGCAATAAGGCTTATTCCACTGCTAAACACCGTTGGGGTCACGTCTCAACAACACACAGAGGCCATCCAGCCGTTACCTGCGCACACTGCGGTCGAATTTACTCAACCAAGTTGAATCTGGAGGAACATGTGCGCTCGCGACACGACGGCATGCACCAACCGGAGGAGCCAACTTACGTGCAAGTTGAGAACAAGTTCCAATGCAAGAGCTGCCCGAAGATGTTCAATAATGTAACGGACCTCAACCGACATAGTCGAACGTGCCAGAATGAGCGGCGCAAAGAGCAGCCAATCGCCAGCCAGAAAAAGGACAATAGAGCGCTGATGGACGACTCGGGCTCGGAATGCGCAGAGACGGAAGATGAGAGCAAAAGCGCAGAAGCCAAGTTGGCCAAAAACCCACAACTCACGATACTCAAGCAGGCACTCACCAAGGGGTCAGAATCTCTCAAACGCGATATGGAAATGAGGAACAAGGCTGCgagcaaaattaatagaaagactgaTAAAGAAATGGAAGGACAAAAACGATGGTTGTGTGAGATGTGTCCTCAAGGGTTTACATCGGTAGAGAGTTTAAAAGAGCACGAGATGACTCACGAATCGTCAAAACCATTCGTTTGTGTTTTATGCGATAAGAATTTCGCTCTGAAATCGTCTCTTAGCAGACACATCCAAACATCACATGCCACTGACCCGACGCCTTACATCAATCATGAAAGTTGCTATAGACCAGCGACTGCGAATTATGATAAGCCAACAGAAGTCAAGTTGGAATCGATCAAACAAGAAGATTTACATGAAAGTGTTGATCTCGTTGAGcatGATATGATGTCGGAATCAATGAACAATAGCGCGTCATCTAATGTTAACAGCAATGGAAACCGTGCGCagtatcatttgtttttcgtctGCGAAATTTGCGGAAGTTCACACCCTAGCAAATGGGACAGATGGCTGCATGTTAGTACGGAGCATGCCGACGAACCTTCCAACAggTGTGATCGCGAAGGCTGTGGAAAAATATTCGCAACAAAGTCGTTGAGAGCGGAGCATACGCAGCATCATATGATTCAGGGCAGTTCACCAAACACGTGCGAGATATGTGGCAAGTTGTGGGGCAGCCGCGTGGACTATTGGAAGCACGTAATGGGTGTGCATACAGAGACCGTGCCGCGCATTTGTGGCGTGTGTCTCAAAGTATTCCAAACGGTTGCGCAACTGAGCGCACACGTACGGGAGAAGCACTGGCCTCTCACCAACGGCGACTACAGTTGCGACATCTGTGGTCGGCCgtattcaaacaaatcaaagatGACGAGACATCGCAAGATCCATGGCGTCGACGAGCCACCGTCACCGGTGCCAGCGATCGAGTTTGAGGAGAGCACCCCTCAATTTGAACTCACAACCCAACTTTTGTCTCAAAATAGCTTGCAACTCGATAAATCGGCATCGGGGCACCCCGAAAATGAACACTTTTGCGAATCCTGCGAGGATCTCAGTTTTCCCACTGCTGAGGCTCTTATGAGCCATCGCAAAAAGTCGCACAGCATTTACCCGTGTGATTTGTGCGACAAGCGTTACGGCCGGACGTCGCATCTCTGGAAGCATGTCAGTCGTATGCACAAGGGACATTATGACGTCACTTGCAGATACTGCAGCAAGATCAGTGCTAACAAAGATCATTTGATTACGCACATTGAAAAGTCTCATAGaCTCGAGCCAGATGCGAAGGAAGAGATCGAAAAGATGCGACCAAAAAAAGCAGCGAAAGAGGAGAAGGAGGAATGCTTCAATTGTCCAAAGTGTCAGAAACTGTTTCACAAGCGTTACCTTTTGCGGCGCCACATGAAGGGCTGTCAGATATATAGGAAGGATCCCGGTGCACTTCTGACACGGTGTCGTGCGTGCGAGCGAATATTCAAGGACCGGGCGAGCCTGCAGAAGCACATCGAGAATCACCATACGACTTACACTTGTCACCTCTGCAACGAAACCATCACTTCCAAACTCGGCATCATGACGCACAATCGTGTCTTGCACATGCTCCATCCAGATCTCACCTGCGAGTATGCCAACTGTCGCAAGTTGTTCCGTACGAAGGAGGACCTGCAGACCCATCGCAACGAGCACAAGAATCATGCGGTGCTCAATGTCTGCGATTATTGCGGCGACactgttgaaaacaaattgaagctGAAGATGCACGTTCTGTCGTTGCACCGAAACGAGATAGGTGTCTCCTGTGGCGTCTGCCTAATCCCAATGAACGATCCGAAAGAGCTCAAACAGCACGTCGAGAACACGCACATCGACATCCTTATGAAGCCCAACACTTGTCAAGTTTGCGGCAAACAGTACGCTTCCAAGTGGAAGGCATTCGACCACACGAAAAAGTGTCACGGCAAAGTGTTCAAAACTTGTAAACAGTGCCTCGCAGTGTTCACCACTGATGATGATCTGAAGTATCATTACCAACATATCCATCGGGTCAGTAAGGAACAGTTGGCCCTGTTTGAGAGCCAGATTGATAGCAGAAAGCAAGATCCGATGGACAGTTGCGTTGTCATGGTTGATCCGAATGTTAAGCAAGAGCCGATCGACGATGAGGACATGTACGATGATATTTATGCGGATCAATTGCATTCCTCCAAGAGCATGAAGCGAAAGAAAACTAGCGACACGTATGATTGTGAGATATGTCCGGAGATGTTCCTTAACTATGATACATTATCAGATCATTATAGaaatgTCCACAACATCGAACCTacccaatttaaaaaattgaaaggatCGAACGCGAAACGCATCCGTCGCGGCAACTTTGAGTGTAAGTCGTGCAAGAAGCAGTACACAACCAAGGCCCATCTGTGGAACCACATGAACGTCTGCTCGAAGAGCTTGAACCAATCCGCCGGCGAGAGCACCTCGAGCGAGTTGCACGCGTCGATCCTCGAGGCACATCTCAAGAACAACAATCAGATCATAAAGCGCGAGGAGCCGGCACCAGAGTCGTCATCGAATCTCAACATCCCGGATTTCAATCTGTTCGAGGACATAAACATGCAGCTGTCCGGACAGAAACCGATGCCGAATCTCATGCCCCTGGCCGCGGGCTCGGCAGTAGCCAAGATGAAACGCGCGCACAACAGCAGTCTCAACCTCAGCAgtagcagcaacagcagcaagTATTCGCGCAAGGACTCGCGCAAGGTTTACGACGAGTCTACGAACACCGAATGCACTTGCGAGGTCTGCGGGAAACCGTGGCCGGCGAAGAAACACCTCTGGCAGCATCTGATTCGGTTCCACCGCGCCGAGGCCGCGGTCACCTGCGGCGTTTGCCTGAAGCTCTGCAGCAGCTACGACGATCTTGCCGAACATCTTAAGATGGCCCATCAAACACTCCTGTCCTGCGAGGGCAACAATTTCACCTGCAAGATTTGCGGTCGTTATCACAACGCCCGCAGCAAGTTGTCGTTGCACATGAGCATTCACATCAATTACAACGGAGTTGTTTGGTGCAAGCGCTGTCAGATGAACTTCGCCAACGTCGATGCGCTTAAAGAGCACATGGCCACGTGCACGATCAAGCAAACGGAAGCTGACGCCGATGCCGACGAGGAGAGCAACAAACAGGCCCCGGATGAGCCCCAAGTTAAAACTGAGCATGAGCAGGTTGACGACAATGACGACGATGACGATGACGATGATGATGACGACGATGATGACGACAATGATAATGAGGACGACGATGAAGATGAAGAAGATGAGGAAGATGGAGAAGGCGAGGAAGAAGGTATTCACGAACAGGATGAAGATGAGGAGGCGGTCGCCGGCGAAGAAACGGCGGAATTCGAGTCTGAGGTTGATGCTGAAGCTTCCGACAATGAGTCCAACTCAAACTCGGATGACTCCGACAGTGCAAGCAACTCGAGCTCGAGTGGAGACGAGGAAGatgaggaggaggaggaggaggaggaggaggaggcgGCTGAGAATGAACCCAACGAGTTGCGTCCGGGCAGCAGTGCAAGCTGCAACAGCAGGAGCATCGACTCGGATTATGACAAAAGTCAGATCGAGGTTTATCAGCAAGGTAGTTACGGGGACAACCAACAGATGCCCCAGATGGAAGAGAGTATCAAGCAGGAGCAAAAGCACCGCTACGCCGGACAAAATGGGATCGATTACTCGGACGATGATGGTCCACCTGTCCTAAGTCCTATGATGCCCATCATGAGCATGCAAGACAATGATGATCTTCAACATTCTGATCAGGTTAGACACAAGCTAAGTCCGATGGTATCGATTTGTCCAAAGGGCGAAAGTACAAATTTGATGGAGACGAACGAGAATGATCTTCAGGCGTGTGTGAAAGTAGAAGAGGAGCAGGAGACCATTAAAATGGACGGTAGAGGGGACGAAGATTACGACGAGATGCAGAGACAAAGTTTCAGGCAGGTACAGGAGTACGAGGAAGAGATAATCAATGAGGAGAACGAGGAGTTCGATATGAGCACGTACGACAAAGAGCAGACGGAACAGGTTGTTGTCTATGAGGAGGAGCACCAGTCCGAGGGGGAGAATTTGATGCAAGTTGAAGTGAGCAACGACAACGATGACGTGCAAATTCATAATCTCAACGGCACTGTGCTCatgattcaaaatgattcCGACGGCAATCCAATCTTTATTCAGCAGAACGATGACGATTCGAATGACTACGTTTATCAGGATAGCCAAGAGTACGAGCTTGACGAAGAGTACGCAGATTACGCCAAAGATCACGATGAGGATGAGAATCCGAGTGCCAAAGGCTAA
Protein Sequence: MALHEARYDELCRLCASYDATRINLFGQEGRNRQLVLKIQTCLPFEVVEEDPLPKAVCFRCLYNLENFYDFRTICINALSMLQRCLPPEFENKNGADRNRGNHYSCLQTEYLKEKENMPILIPEAPIVNPNAALGTPPRLNSDGEAEHDIEEVNQSGTEEGCDDVDDHKSEDYEMDMETNPSDFLELTSSVPEDADDSVAKQEAVAVLQNRNEQQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITNDHTSYKRPYQCDLCNKAYSTAKHRWGHVSTTHRGHPAVTCAHCGRIYSTKLNLEEHVRSRHDGMHQPEEPTYVQVENKFQCKSCPKMFNNVTDLNRHSRTCQNERRKEQPIASQKKDNRALMDDSGSECAETEDESKSAEAKLAKNPQLTILKQALTKGSESLKRDMEMRNKAASKINRKTDKEMEGQKRWLCEMCPQGFTSVESLKEHEMTHESSKPFVCVLCDKNFALKSSLSRHIQTSHATDPTPYINHESCYRPATANYDKPTEVKLESIKQEDLHESVDLVEHDMMSESMNNSASSNVNSNGNRAQYHLFFVCEICGSSHPSKWDRWLHVSTEHADEPSNRCDREGCGKIFATKSLRAEHTQHHMIQGSSPNTCEICGKLWGSRVDYWKHVMGVHTETVPRICGVCLKVFQTVAQLSAHVREKHWPLTNGDYSCDICGRPYSNKSKMTRHRKIHGVDEPPSPVPAIEFEESTPQFELTTQLLSQNSLQLDKSASGHPENEHFCESCEDLSFPTAEALMSHRKKSHSIYPCDLCDKRYGRTSHLWKHVSRMHKGHYDVTCRYCSKISANKDHLITHIEKSHRLEPDAKEEIEKMRPKKAAKEEKEECFNCPKCQKLFHKRYLLRRHMKGCQIYRKDPGALLTRCRACERIFKDRASLQKHIENHHTTYTCHLCNETITSKLGIMTHNRVLHMLHPDLTCEYANCRKLFRTKEDLQTHRNEHKNHAVLNVCDYCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMNDPKELKQHVENTHIDILMKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFTTDDDLKYHYQHIHRVSKEQLALFESQIDSRKQDPMDSCVVMVDPNVKQEPIDDEDMYDDIYADQLHSSKSMKRKKTSDTYDCEICPEMFLNYDTLSDHYRNVHNIEPTQFKKLKGSNAKRIRRGNFECKSCKKQYTTKAHLWNHMNVCSKSLNQSAGESTSSELHASILEAHLKNNNQIIKREEPAPESSSNLNIPDFNLFEDINMQLSGQKPMPNLMPLAAGSAVAKMKRAHNSSLNLSSSSNSSKYSRKDSRKVYDESTNTECTCEVCGKPWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCSSYDDLAEHLKMAHQTLLSCEGNNFTCKICGRYHNARSKLSLHMSIHINYNGVVWCKRCQMNFANVDALKEHMATCTIKQTEADADADEESNKQAPDEPQVKTEHEQVDDNDDDDDDDDDDDDDDDNDNEDDDEDEEDEEDGEGEEEGIHEQDEDEEAVAGEETAEFESEVDAEASDNESNSNSDDSDSASNSSSSGDEEDEEEEEEEEEEAAENEPNELRPGSSASCNSRSIDSDYDKSQIEVYQQGSYGDNQQMPQMEESIKQEQKHRYAGQNGIDYSDDDGPPVLSPMMPIMSMQDNDDLQHSDQVRHKLSPMVSICPKGESTNLMETNENDLQACVKVEEEQETIKMDGRGDEDYDEMQRQSFRQVQEYEEEIINEENEEFDMSTYDKEQTEQVVVYEEEHQSEGENLMQVEVSNDNDDVQIHNLNGTVLMIQNDSDGNPIFIQQNDDDSNDYVYQDSQEYELDEEYADYAKDHDEDENPSAKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01493053;
90% Identity: iTF_01493053;
80% Identity: -