Basic Information

Insect: Trissolcus brochymenae
Gene Symbol: -
Assembly: GCA_030523145.1
Location: JAQQRF010000298.1:148830-159987[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 6.2e-06 0.00068 20.4 1.0 1 23 220 242 220 242 0.98

2 27 0.0043 0.47 11.5 1.3 1 23 265 288 265 288 0.96

3 27 0.00016 0.017 16.0 0.8 2 23 295 317 294 317 0.96

4 27 0.00026 0.029 15.3 0.8 1 22 335 356 335 356 0.96

5 27 0.0038 0.42 11.7 0.1 3 23 449 469 448 469 0.98

6 27 1.5e-05 0.0016 19.3 1.8 1 23 475 498 475 498 0.98

7 27 5.8 6.4e+02 1.6 0.2 1 23 572 595 572 595 0.81

8 27 0.031 3.5 8.8 1.1 2 23 602 625 602 625 0.93

9 27 3.1 3.4e+02 2.5 0.0 2 23 634 656 634 656 0.84

10 27 0.04 4.4 8.4 0.1 3 23 664 685 663 685 0.95

11 27 3.5e-06 0.00039 21.2 1.2 1 23 693 715 693 715 0.98

12 27 1.1 1.2e+02 4.0 0.8 3 23 764 786 762 786 0.87

13 27 0.00013 0.014 16.3 1.4 1 23 789 812 789 812 0.96

14 27 0.0023 0.25 12.4 1.2 2 23 819 841 818 841 0.96

15 27 0.0013 0.15 13.1 2.7 1 21 868 888 868 889 0.96

16 27 0.0027 0.29 12.2 1.8 2 23 903 924 902 925 0.93

17 27 0.3 34 5.7 0.9 1 23 928 951 928 951 0.94

18 27 0.0046 0.52 11.4 1.0 2 23 958 981 957 981 0.94

19 27 0.66 73 4.6 0.1 2 23 989 1011 989 1011 0.94

20 27 0.22 25 6.1 2.7 2 23 1049 1071 1049 1071 0.96

21 27 0.078 8.7 7.5 1.7 2 23 1077 1099 1076 1099 0.94

22 27 0.02 2.3 9.4 0.2 1 23 1166 1189 1166 1189 0.96

23 27 0.00011 0.012 16.5 1.4 1 21 1212 1232 1212 1233 0.95

24 27 0.13 15 6.8 1.2 2 23 1353 1375 1352 1375 0.94

25 27 0.087 9.7 7.4 0.3 2 23 1382 1404 1381 1404 0.96

26 27 0.2 22 6.3 2.1 1 23 1415 1437 1415 1437 0.97

27 27 0.06 6.7 7.9 0.1 3 22 1446 1465 1446 1465 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	6.2e-06	0.00068	20.4	1.0	1	23	220	242	220	242	0.98
2	27	0.0043	0.47	11.5	1.3	1	23	265	288	265	288	0.96
3	27	0.00016	0.017	16.0	0.8	2	23	295	317	294	317	0.96
4	27	0.00026	0.029	15.3	0.8	1	22	335	356	335	356	0.96
5	27	0.0038	0.42	11.7	0.1	3	23	449	469	448	469	0.98
6	27	1.5e-05	0.0016	19.3	1.8	1	23	475	498	475	498	0.98
7	27	5.8	6.4e+02	1.6	0.2	1	23	572	595	572	595	0.81
8	27	0.031	3.5	8.8	1.1	2	23	602	625	602	625	0.93
9	27	3.1	3.4e+02	2.5	0.0	2	23	634	656	634	656	0.84
10	27	0.04	4.4	8.4	0.1	3	23	664	685	663	685	0.95
11	27	3.5e-06	0.00039	21.2	1.2	1	23	693	715	693	715	0.98
12	27	1.1	1.2e+02	4.0	0.8	3	23	764	786	762	786	0.87
13	27	0.00013	0.014	16.3	1.4	1	23	789	812	789	812	0.96
14	27	0.0023	0.25	12.4	1.2	2	23	819	841	818	841	0.96
15	27	0.0013	0.15	13.1	2.7	1	21	868	888	868	889	0.96
16	27	0.0027	0.29	12.2	1.8	2	23	903	924	902	925	0.93
17	27	0.3	34	5.7	0.9	1	23	928	951	928	951	0.94
18	27	0.0046	0.52	11.4	1.0	2	23	958	981	957	981	0.94
19	27	0.66	73	4.6	0.1	2	23	989	1011	989	1011	0.94
20	27	0.22	25	6.1	2.7	2	23	1049	1071	1049	1071	0.96
21	27	0.078	8.7	7.5	1.7	2	23	1077	1099	1076	1099	0.94
22	27	0.02	2.3	9.4	0.2	1	23	1166	1189	1166	1189	0.96
23	27	0.00011	0.012	16.5	1.4	1	21	1212	1232	1212	1233	0.95
24	27	0.13	15	6.8	1.2	2	23	1353	1375	1352	1375	0.94
25	27	0.087	9.7	7.4	0.3	2	23	1382	1404	1381	1404	0.96
26	27	0.2	22	6.3	2.1	1	23	1415	1437	1415	1437	0.97
27	27	0.06	6.7	7.9	0.1	3	22	1446	1465	1446	1465	0.95

Sequence Information

Coding Sequence: ATGGCCCTGCACGAATCTCGTTACGACGAGCTGTGCAGGCTCTGCGCGAGCTACGACGCCACCAGAATCAACCTCTTCGGACAGGAGGGACGGAACAGGCAGCTCGTCCTCAAAATCCAAACCTGTCTACCATTCGAGGTGGTCGAAGAGGATCCACTACCGAAAGCCGTGTGTTTTCGATGCCTTtataatttggaaaatttttacgaCTTTAGGACCATTTGCATCAATGCATTGTCCATGCTGCAGAGGTGCTTGCCACCGGAGTTTGAAcAGAATAAAAATGGAGCAGAGCGAAATCGCGGGAACCATTACAGTTGCCTGCAAACAGAGTACCTCAAAGAGAAGGAAAATATGCCAATACTTATCCCGGAAGCCCCCATAGTGAATCCAAACGCAGCTTTGGGAACACCGCCGCGACTCAATTCCGACGGAGAAGCCGAGCACGATATTGAGGAAATCAATCAGAGTGGGACAGAAGAAGGTTGTGATGATGTGGACGACCACAAGTCAGAAGATTACGAGATGGATATGGAGACCAACCCGAGCGACTTTTTGGAGCTGACGTCGAGCGTTCCCGAGGATGCGGACGACAGCGTTGCAAAGCAGGAAGCGGTGGCTGTGTTGCAAAACAGAAATGAACAGCAACACGAGGTTTACGTCTGTTCGTTGTGCAACAAGGCTTTCAGCTCCAAAGGTCACTTGTCCCTTCATGCGCGAATACACGTTGGCGCGGGAGACGTGATAGGCGAAAAAGTTATCACCAATGATCATACCTCGTACAAAAGACCTTACCAATGCGATCTCTGCAATAAGGCTTATTCCACTGCTAAACACCGTTGGGGTCACGTCTCAACAACACACAGAGGCCATCCAGCCGTTACTTGTGCGCATTGCGGTCGAATTTACTCAACCAAGTTGAATCTGGAGGAACATGTGCGCTCTCGGCACGACGGCATGCACCAACCGGAGGAGCCAACTTATGTACAAGTTGAGAACAAGTTCCAATGCAAGAGCTGCCCGAAGATGTTCAATAATGTAACGGACCTCAACCGACACAGTCGAACGTGCCAGAACGAGCGGCGCAAAGAGCAGCCAGTTGCCAGCCAGAAAAAGGACAATAGGGCGCTGATGGACGACTCGGGCTCGGAATGCGCTGAGACGGAAGATGAGAGCAAAAGCGCAGAAGCCAAGTTGGCCAAAAACCCACAACTCACGATACTCAAGCAGGCACTCACCAAGGGGTCAGAATCTCTCAAACGCGATATGGAAATGAGGAACAAGGCTGCGagcaaaattaatagaaaGACTGataaagaAATGGAAGGGCAAAAACGATGGTTGTGTGAGATGTGTCCTCAAGGGTTTACATCGATAGAAAGTTTAAAAGAGCATGAGATGACGCACGAATCGGCAAAACCATTCGTTTGTGTTTTGTGCGATAAGTGTTTTGCTCTGAAATCGTCACTTAGCAGACACATCCAAACATCACATGCCACTGACCCGACGCCTTACATCAATCATGAAAGTTGCTACAGACCAGCGACTGCGAATTATGATAAGCCAACAGAAGTCAAGTTGGAATCGATCAAACAAGAGGATTTACATGAAAGTGTTGATCTTGTTGAGcAAGACATGATGTCGGAATCAATGAACAATAGCACGTCATCAAATGTTAACGGCAATGGAAACCGTGCGCagtatcatttatttttcgtctGTGAAATTTGCGGAAGTTCACACCCTAGCAAATGGGACAGATGGCTTCATGTTAGTACAGAGCATGCCGACGAACCTTCCAACAGGTGTGATCGCGAAGGCTGTGGAAAAATATTCGCAACAAAGTCGTTGAGAGCGGAGCATACGCAACATCATATGATTCAGGGCAGTTCACCAAACACGTGCGAAATATGTGGCAAGCTGTGGGGCAGCCGCGTGGACTATTGGAAGCATGTAATGGGTGTGCATACAGAGACTGTGCCGCGCATTTGTGGCGTTTGTCTCAAAGTATTCCAAACGGTTGCGCAACTGAGCGCACACGTACGGGAGAAGCACTGGCCTCTCACCAACGGCGACTATAGCTGCGACATCTGTGGTCGGCCgtattcaaacaaatcaaagatGACGAGACATCGCAAGATCCATGGCGTCGACGAGCCACCGTCACCAGTGCCAGCAATCGAGTTTGAGGAGTCGACTCCTCAATTTGAACTCACAACCCAACTTTTGTCTCACAATAGCTTGCAACTTGATAAATCAGCTTCAGGGCATCCTGAAAATGAGCACTTTTGCGAATCCTGTGAGGACCTCAGTTTTCCCACTGCTGAGGCTCTCATGAGCCATCGCAAAAAGTCACACAGCATTTATCCGTGTGATTTGTGTGACAAGCGTTACGGCCGGACGTCGCATCTCTGGAAGCACGTCAGCCGTATGCACAAGGGACATTATGACGTCACCTGCAGATATTGCAGCAAGATTAGTGCTAACAAAGATCATTTGATTACGCACATTGAAAAATCTCATAgacTCGAGCCAGATGCAAAGGAAGAGATTGAAAAGATGCGACCAAAAAAAGCGGCGAAAGAAGAGAAGGAGGAATGCTTCAATTGTCCAAAATGTCAGAAATTGTTTCACAAACGTTACCTTTTGCGGCGCCACATGAAGGGCTGCCAGATTTATCGCAAAGACCCCGGGGCACTTCTGACACGGTGTCGTGCGTGCGAACGAATATTCAAAGACCGGGCAAGCCTGCAGAAACACATTGAAAATCACCACACGACGTACACCTGTCACCTCTGCAACGAAACCATCACCTCCAAGCTCGGCATCATGACGCACAATCGTGTCCTGCACATGCTTCATCCAGATCTCACTTGTGAGTACGCCAACTGTCGCAAGCTGTTCCGTACGAAGGAGGACCTGCAGACACATCGCAACGAGCACAAGAATCATGCGGTACTCAATGTCTGTGACTACTGCGGCGACactgttgaaaacaaattgaagttGAAGATGCACGTCCTGTCGTTGCACCGAAATGAGATAGGCGTCTCCTGTGGCGTCTGCCTGATCCCAATGAACGACCCAAAAGAGTTGAAGCAGCACGTCGAGAATACACACATCGACATCCTCATGAAGCCCAACACTTGTCAGGTCTGCGGCAAACAGTACGCCTCCAAGTGGAAGGCTTTTGATCACACGAAAAAATGTCACGGCAAAGTGTTCAAAACTTGTAAACAGTGCCTCGCAGTGTTCACCACTGATGATGATCTGAAGTATCATTATCAACATATCCATCGGGTCAGTAAGGAACAGTTGGCCTTGTTTGAAAGTCAGATTGACAGCAGAAAACAAGATCCCATGGACAGTTGCGTTGTTATGGTCGATCCAAATGTTAAGCAAGAGCCGATCGACGATGAGGATATGTACGATGATATTTATGTGGATCAATTGCATTCTTCTAAGAATATGAAGCGAAAGAAATCTAGCGACACGTATGATTGCGAGATATGTCCGGAGATGTTCCTTAACTATGATACATTATCAGATCATTATAGAAACGTTCACAACATTGAACCTAcccaatttaaaaaactaaaaggGTCGAACGCGAAACGCATCCGTCGCGGCAACTTTGAATGTAAGTCATGCAAAAAGCAGTATACAACCAAGGCGCACCTATGGAACCACATGAACGTCTGTTCGAAAAGCTTGAACCAATCTGCCGGCGAGAGCACTTCGAGCGAATTGCACGCGTCGATTCTTGAGGCTCATCTTAAGAACAACAATCAGATCATAAAGCGTGAGGAGCCGGCGCCAGAGTCATCGTCATCGAATCTCAACATCCcggatttcaatttgtttgaggACATAAACATGCAACTGTCCGGACAAAAACCGATGCCGAATCTCATGCCCTTGGCCGCAGGCTCGGCGGTAGCCAAGATGAAACGCGCACACAATACTAGCCTCAACCTCAGCAGCAGCAGTAACAGCAGCAAGTATTCACGCAAGGACTCGCGTAAGGTTTATGACGAGTCGACAAACACAGAATGCACCTGCGAGGTCTGTGGAAAGCCGTGGCCGGCAAAGAAGCACCTTTGGCAGCACCTTATTCGGTTCCATCGTGCCGAGGCCGCAGTCACCTGCGGCGTTTGCCTCAAGCTCTGCAGCAGCTACGACGATCTTGCCGAGCACCTTAAGATGGCTCATCAGACCCTCCTCTCCTGCGAGGGCAACAATTTTACCTGCAAGATTTGCGGCCGTTATCACAACGCCCGTAGCAAACTGTCATTGCACATGAGCATTCATATCAACTACAACGGCGTCGTTTGGTGCAAGCGCTGTCAAATGAACTTTGCCAATGTCGACGCGCTTAAAGAGCACATGGCCACATGCACGATCAAGCAAACGGAAGCTGACGCCGATGTAGACGAGGAGATTAACAAACGGGTACCGGATGAGCCTCAAGTCAAAACCGAGCATGAGCAGGTTGATGACAATGACGATGATGAGGACGATGAAGATGACGATGACGATGACGACGACAATGACAATGAGGATGATGATGATGAGGAAGAGGATGAAGACGATAGAGAGGGCGAGGAAGAAGGCCTTCATGAACAAGATGAAGATGAGGAGGAAGAAGAGGCGGTTGTCGGTGAAGAAACGGCAGAATTCGAGTCGGAAGTTGATGCAGAAGCTTCCGACAATGAGTCCAACTCAAATTCGGATGATTCCGACAGTGCAAGCAACTCGAGCTCTAGTGGAGACGAGGAAGATGAGGATGAAGAGGAGGAGGCTGCTGAGAATGAACCTAACGAACTGCGCCCGGGTAGCAGTGGCAGCTGCAACAGCAGGAGCATCGACTCGGATTATGACAAAAGTCAGATCGAGGTTTACCAGCAAAGTGGTTACGTGGATAATCAACAAATGCCCCAGATGGAGGAGAATATCAAGCAGGAACAAAAGCACCGTTATGCCGGACAAAATGGAATCGATTACTCGGATGATGATGGTCCTCCTGTCTTAAGTCCTATGATGCCTATCATGAGTATGCAAGACAATGATGATCTTCAACAATCTGATCAGGTTAGACACAAGCTAAGTCCGATGGTATCGATTTGTCCAAAGGGCGAAAGTACAAATTTGATGGAGACGAACGAGAATAATCTACAAGCGTGTGTGAAAGTAGAACAGGAACaggaaacaattaaaatggatGATAGAGGGGATGAAGATTACGACGAGATGCAGAGGCAAAGTTTCAGACAGGTCCAGGAGTACGAGGAAGAGATAATCAATGAGGAGAACGAGGAGTTCGATATGGGCACGTACGACAAAGAGCAGTCAGAACAAGTTGTTGTTTACGAGGAAGAGCACCAGTCCGAGGGCGAGAATTTGATGCAAGTCGAAGTGAGCAACGACAATGGCGATGTACAAATTCACAATCTCAATGGCACTGTGCTCATGATTCAAAACGATTCGGACGGCAATCCGATTTTCATCCAGCAGAACGATGATGATTCCAATGACTACGTTTATCAGGATAGCCAAGAGTACGAGCTCGACGAAGAGTACGCAGACTACGCCAAAGATCACGATGAGGATGACAATCCGAGTGCCAAAGGCTAA
Protein Sequence: MALHESRYDELCRLCASYDATRINLFGQEGRNRQLVLKIQTCLPFEVVEEDPLPKAVCFRCLYNLENFYDFRTICINALSMLQRCLPPEFEQNKNGAERNRGNHYSCLQTEYLKEKENMPILIPEAPIVNPNAALGTPPRLNSDGEAEHDIEEINQSGTEEGCDDVDDHKSEDYEMDMETNPSDFLELTSSVPEDADDSVAKQEAVAVLQNRNEQQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITNDHTSYKRPYQCDLCNKAYSTAKHRWGHVSTTHRGHPAVTCAHCGRIYSTKLNLEEHVRSRHDGMHQPEEPTYVQVENKFQCKSCPKMFNNVTDLNRHSRTCQNERRKEQPVASQKKDNRALMDDSGSECAETEDESKSAEAKLAKNPQLTILKQALTKGSESLKRDMEMRNKAASKINRKTDKEMEGQKRWLCEMCPQGFTSIESLKEHEMTHESAKPFVCVLCDKCFALKSSLSRHIQTSHATDPTPYINHESCYRPATANYDKPTEVKLESIKQEDLHESVDLVEQDMMSESMNNSTSSNVNGNGNRAQYHLFFVCEICGSSHPSKWDRWLHVSTEHADEPSNRCDREGCGKIFATKSLRAEHTQHHMIQGSSPNTCEICGKLWGSRVDYWKHVMGVHTETVPRICGVCLKVFQTVAQLSAHVREKHWPLTNGDYSCDICGRPYSNKSKMTRHRKIHGVDEPPSPVPAIEFEESTPQFELTTQLLSHNSLQLDKSASGHPENEHFCESCEDLSFPTAEALMSHRKKSHSIYPCDLCDKRYGRTSHLWKHVSRMHKGHYDVTCRYCSKISANKDHLITHIEKSHRLEPDAKEEIEKMRPKKAAKEEKEECFNCPKCQKLFHKRYLLRRHMKGCQIYRKDPGALLTRCRACERIFKDRASLQKHIENHHTTYTCHLCNETITSKLGIMTHNRVLHMLHPDLTCEYANCRKLFRTKEDLQTHRNEHKNHAVLNVCDYCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMNDPKELKQHVENTHIDILMKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFTTDDDLKYHYQHIHRVSKEQLALFESQIDSRKQDPMDSCVVMVDPNVKQEPIDDEDMYDDIYVDQLHSSKNMKRKKSSDTYDCEICPEMFLNYDTLSDHYRNVHNIEPTQFKKLKGSNAKRIRRGNFECKSCKKQYTTKAHLWNHMNVCSKSLNQSAGESTSSELHASILEAHLKNNNQIIKREEPAPESSSSNLNIPDFNLFEDINMQLSGQKPMPNLMPLAAGSAVAKMKRAHNTSLNLSSSSNSSKYSRKDSRKVYDESTNTECTCEVCGKPWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCSSYDDLAEHLKMAHQTLLSCEGNNFTCKICGRYHNARSKLSLHMSIHINYNGVVWCKRCQMNFANVDALKEHMATCTIKQTEADADVDEEINKRVPDEPQVKTEHEQVDDNDDDEDDEDDDDDDDDNDNEDDDDEEEDEDDREGEEEGLHEQDEDEEEEEAVVGEETAEFESEVDAEASDNESNSNSDDSDSASNSSSSGDEEDEDEEEEAAENEPNELRPGSSGSCNSRSIDSDYDKSQIEVYQQSGYVDNQQMPQMEENIKQEQKHRYAGQNGIDYSDDDGPPVLSPMMPIMSMQDNDDLQQSDQVRHKLSPMVSICPKGESTNLMETNENNLQACVKVEQEQETIKMDDRGDEDYDEMQRQSFRQVQEYEEEIINEENEEFDMGTYDKEQSEQVVVYEEEHQSEGENLMQVEVSNDNGDVQIHNLNGTVLMIQNDSDGNPIFIQQNDDDSNDYVYQDSQEYELDEEYADYAKDHDEDDNPSAKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01493773;
90% Identity: iTF_01493773;
80% Identity: -