Basic Information

Insect: Trissolcus japonicus
Gene Symbol: -
Assembly: GCA_030522925.1
Location: JAPYZS010000007.1:192770-194761[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.011 1.2 10.4 0.6 2 23 147 168 146 168 0.97

2 15 6.3e-05 0.0069 17.4 2.2 2 23 174 195 173 195 0.97

3 15 2.3e-07 2.5e-05 25.1 0.7 1 23 201 223 201 223 0.98

4 15 0.0019 0.2 12.7 0.2 2 23 248 270 247 270 0.95

5 15 3.4e-05 0.0037 18.2 0.2 1 20 276 295 276 298 0.94

6 15 1.9e-05 0.0021 19.0 2.9 1 23 304 326 304 326 0.98

7 15 2.4e-06 0.00026 21.8 1.7 1 23 332 354 332 354 0.96

8 15 3.5e-05 0.0038 18.2 0.6 1 23 360 382 360 382 0.98

9 15 2.1e-05 0.0024 18.9 7.2 1 23 388 410 388 410 0.97

10 15 9.1e-08 9.9e-06 26.3 1.0 1 23 415 437 415 437 0.97

11 15 6.2e-05 0.0068 17.4 1.4 1 23 443 465 443 465 0.97

12 15 0.001 0.11 13.6 6.7 1 23 471 493 471 493 0.96

13 15 2.6e-07 2.9e-05 24.9 0.6 1 23 499 521 499 521 0.98

14 15 1.7e-06 0.00018 22.3 0.8 2 23 528 549 527 549 0.97

15 15 0.00037 0.041 14.9 0.4 2 23 556 578 555 578 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.011	1.2	10.4	0.6	2	23	147	168	146	168	0.97
2	15	6.3e-05	0.0069	17.4	2.2	2	23	174	195	173	195	0.97
3	15	2.3e-07	2.5e-05	25.1	0.7	1	23	201	223	201	223	0.98
4	15	0.0019	0.2	12.7	0.2	2	23	248	270	247	270	0.95
5	15	3.4e-05	0.0037	18.2	0.2	1	20	276	295	276	298	0.94
6	15	1.9e-05	0.0021	19.0	2.9	1	23	304	326	304	326	0.98
7	15	2.4e-06	0.00026	21.8	1.7	1	23	332	354	332	354	0.96
8	15	3.5e-05	0.0038	18.2	0.6	1	23	360	382	360	382	0.98
9	15	2.1e-05	0.0024	18.9	7.2	1	23	388	410	388	410	0.97
10	15	9.1e-08	9.9e-06	26.3	1.0	1	23	415	437	415	437	0.97
11	15	6.2e-05	0.0068	17.4	1.4	1	23	443	465	443	465	0.97
12	15	0.001	0.11	13.6	6.7	1	23	471	493	471	493	0.96
13	15	2.6e-07	2.9e-05	24.9	0.6	1	23	499	521	499	521	0.98
14	15	1.7e-06	0.00018	22.3	0.8	2	23	528	549	527	549	0.97
15	15	0.00037	0.041	14.9	0.4	2	23	556	578	555	578	0.97

Sequence Information

Coding Sequence: ATGGATGAACCGGAGGATAAGGATGAGGGGATGGATGCGTTAGGAATTGATAGCCAAGTGAtgGATGAAAACATCGTAAGTGTCGTACTGAAAGAGGAACCTGGAGAAAGGTTCGATCCCGGTTACATGGAAGATATCTGTTCTGGCACTTCATTCTTATCTGGAAAAGTATTTCTACCTATTGACAATCAAGAAGTTGATTTTCCTGATGAGATGGTAAAATTAGAGCTGGAAGGTGAATCATCAGGCGCACATACGAACTGGGCAGCTCATATAACGAACAATGCGTCGCTTTGCGAAAAGGTGGAGAGCGCCGTTCAACGGTGTCTTGTTGTGAGTGATTTTGCCTGCGTGGCCGAAGAGACTGAGAAAGATCTGAACGAGACCGACGAGGACGAGAACGACAACACCGACGAGCAACAAAAGTTCTACAAGATTCAGTGCACGATATGTAAAAAATGGTTTCTAAACAACGACTCGATGATTACGCACTTGCGCACGCACTGTGAGGGTGGCACGCAATGCGAGATCTGCGAGCAGAGCTTTGTGGACAACTGTAGCTTGCATGCCCACATGCTCAGCCACGTGGGGATGACTCCGTTCGAGTGCAACATCTGTCAGAAAGCTTTTGCCTACAAATGGAGTTTGCGGAGTCACATGCAAACTCACAGCTCGACCGACAAGAGTTCGTCACCTGTCATCGATAACGACGAGCTCAGCAGTACAACCGAACAGAGGTTGCAGTGTGACCAGTGCGAGATGGTTGTTAAGGACAAGCTCACTCTGAACCGTCACATACAGCTGAGCCATAATCAAGTACAGGAATATCGGTGCGAGGTGTGTTCGATTAGCTTCAAGGATAAGGCGAAATTGAATGTCCACATGCCTGTTCACGCAGGGAGCAAACAGTTCAAATGCACCATGTGCCACCGGCTGTTTGCCCAGAAAACAGCTCTGAACAATCACATGCTGTCTCACAGCGGAGAAAAGCCTCACGCCTGTAGCGTCTGCGAGAAGACGTACAAGAGGAAATCCGAGCTGATCAGGCACACGATGGTGCACACGGGAGAGCGGCCCTACGAGTGCAAGGAGTGCCTGATGACGTTCCGCGAGAAGGCCAAACTCAATTCTCACATGCTGGTGCACACCGGGGAGAAGCCGCACGAGTGTCACATCTGCCACAAGGCGTGTGCCCGTAAGTCCGACCTCAACAGTCACATGCTCTCCCACACGGGCGGCCAGTACGACTGCAAAGTTtgcgacaaaatttttactcgcAAGTCCGACTTGAACAGGCACACGCTCATTCACACGGGGGAGAAACCGTTTGCGTGCGAGCACTGCGACATGGCCTTCCGAGAGAAGACCAGACTCAATTCGCACATGCTCATGCACACGGGCGACAATAGACACGCCTGTCACATCTGCCATAAGAGTTTTCGCGAAAAGTCCATCTATAAGAAGCACATGCTCGTGCACACCGGCGACAGGCCTTATGAGTGTTACGTCTGTAACAAAGCGTTCACCCAGAAGAGCACACTCAATAGTCACATCCTGGTGCACGTGAAGGAGGCCTCGGTCGAGTGCCCCGTTTGTAACAAGATATTCAATCACAAGGCGGTGCTCAAGAAACATATGCTCACCCACTGCAATGACGACACCAATCAGTGCCCGAtctgtttgaaaaagttgtcGCACAAAACCGCGTTGGCCAACCACATCGCCACCGCACACACATCTTAA
Protein Sequence: MDEPEDKDEGMDALGIDSQVMDENIVSVVLKEEPGERFDPGYMEDICSGTSFLSGKVFLPIDNQEVDFPDEMVKLELEGESSGAHTNWAAHITNNASLCEKVESAVQRCLVVSDFACVAEETEKDLNETDEDENDNTDEQQKFYKIQCTICKKWFLNNDSMITHLRTHCEGGTQCEICEQSFVDNCSLHAHMLSHVGMTPFECNICQKAFAYKWSLRSHMQTHSSTDKSSSPVIDNDELSSTTEQRLQCDQCEMVVKDKLTLNRHIQLSHNQVQEYRCEVCSISFKDKAKLNVHMPVHAGSKQFKCTMCHRLFAQKTALNNHMLSHSGEKPHACSVCEKTYKRKSELIRHTMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECHICHKACARKSDLNSHMLSHTGGQYDCKVCDKIFTRKSDLNRHTLIHTGEKPFACEHCDMAFREKTRLNSHMLMHTGDNRHACHICHKSFREKSIYKKHMLVHTGDRPYECYVCNKAFTQKSTLNSHILVHVKEASVECPVCNKIFNHKAVLKKHMLTHCNDDTNQCPICLKKLSHKTALANHIATAHTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01493045;
90% Identity: iTF_01493045;
80% Identity: -