Tjap018740.2
Basic Information
- Insect
- Trissolcus japonicus
- Gene Symbol
- dmrta2
- Assembly
- GCA_030522925.1
- Location
- JAPYZS010004157.1:149-3539[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-28 4.3e-24 84.7 10.8 1 47 44 90 44 90 0.99 2 2 1.4 9.5e+03 -2.8 0.0 33 43 177 187 175 188 0.81
Sequence Information
- Coding Sequence
- ATGTCGCTGCCGCGCGGAGTCGGTCTCGGCGTGGACGTGAGTCAGCTGATGCAACaccagcaacagcagcagcagcaccACGTCCTGCCGGCGGCGTTTTTCTTGCGCGCGAGTGCAGAGCGCTACCAAAGGACACCAAAGTGCGCGAGGTGCCGCAACCACGGGGTCGTGTCCGCCCTTAAGGGACATAAGCGCTATTGTCGCTGGCGGGACTGCGTCTGTGCCAAATGTACCCTCATCGCCGAGAGACAACGGGTTATGGCTGCACAAGTAGCACTGAGAAGACAGCAGGCCCAAGAAGAGAGCGAGGCTCGGGAGCTGGGGTTGCAGTTGCAATATAACTCTGCGAACTGTACGACCGCTTCGGTGTTGCCCAGCGCGACGGGTGCCTCGCCGCCCGTCGGCAACGGCTCGCCCCCTCACCCCGGACACGTTTCAAGTCCCGTGGGACTCTCTCTTCCGAATGCCGCAGCGGCCGCTGCTGCAGCTGCGGCCCAAATCCAAAACCAACTGCAGCACCAGCAGTCAGACTGCGGCAACATTCTGCAACGGATGCGTGTTCCTGGTCAGGATGACTACCGACCTGTCAAGGCTGAGAAAAACGAGACCAACTCTCATGCTAATTCGATCGCCGCAGCTATCACAGCGggtatttattttacatccatttataatttttctttttaa
- Protein Sequence
- MSLPRGVGLGVDVSQLMQHQQQQQQHHVLPAAFFLRASAERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEESEARELGLQLQYNSANCTTASVLPSATGASPPVGNGSPPHPGHVSSPVGLSLPNAAAAAAAAAAQIQNQLQHQQSDCGNILQRMRVPGQDDYRPVKAEKNETNSHANSIAAAITAGIYFTSIYNFSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00089568;
- 90% Identity
- -
- 80% Identity
- -