Tjap010250.1
Basic Information
- Insect
- Trissolcus japonicus
- Gene Symbol
- ttk
- Assembly
- GCA_030522925.1
- Location
- JAPYZS010000643.1:51630-53489[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-12 3.2e-09 36.9 0.0 1 43 327 370 327 372 0.93
Sequence Information
- Coding Sequence
- ATGTCTGACGAACCGCATCAGTACAACTTGAGGTGGCGGAACCACCGCAAGAACTTTTTCGACGAGCTTGAAAATCTGTTCAAGACCGACCTCCTGACGGACATCAACCTCATCTTGGAGGGCGGCCGAGTGGTGCCCTGCCACAAGATGGTCCTCGCAACGACCTCATTGGCCTTCAGGGACTTTTTGCTCAAGAATCCGGAGGCCCTGGACATGATAATTCCCGGGGTGACGTACGACCAGATGAGAACCCTGCTGGAGTACATGTACAGCGGTCAGGCGCAGATCATGTACTCCGAGTTGAGCAGCCTGTTGAAGGTCGCGGAGCAGCTCAAAATCAAGGGCCTGACGACAGACGCCGAGACCGACGGCTCAAACTCGCCCTCGAGCAGCGTCCAGGAGGGCGCAGCGGCCGCGCCGGAGGAATCGGCCGGCTCGCCTCCCCCCACGATCAGCACCAGCACCAACGACCGCGCGGACAACAAACCGGCCGAGAGCAGCTCGGCCTCGCCCCCTCCGTCCGCACACTCGACCGGAAACATCTACGATTATTACAAGTATTCGTCCGCGTATAACATGCCGGCGTTCCCCAGTCTCACGCCCTTCCCCATCCCACAATACGCCGCCGCCATGGCCGCGGCCGCCGCCAGCGAGTACTACGGCAGCCTCCACAAGTTCAAGGACACGCCGATCCTCAGAAATGTGTTGCACCAAAATAACCACGACGAGTCCATGGACCACGCCGAGTCGATCCACGATGAGAAGACCCGCGAGTCCGCCGCCTCCATGGTCAGCAGTGTTTACGACGAGGACAAGTACCCTGATATTAAACCTAAGAATTTTTACAAGGTCAAGAAGGAGTTCATGGAGCGGgtgcagcagcaacagcagagTCAACAGTGCGAGTCCACGGAAAACACATCCACACCGCCTAAGTCAGGGAAACAGAAGGTCGACTGGAAACGGTACAAACAATACTCGCCGGACGACCTTAACCGGGCGATCAGCACAGTGATCGACGGCAAGATGAGCGCCCTGCAGGCGTCGAAGGACTTTGGTGTGCCCTCGCGCACTCTTTACGACAAGATTAAGCGGCTGAAGAGCCAGAAGGAGCAGGGCGGCAGCCCGCAGAGTCCCGACGTGGGCAACAACAGGAGCTACCGGAACAAGTCGCAGAATTACGGGATGATCAAGCGGTTCTACAGCATGCTGACGCCGGAGAACTTGCGGGCGATCAACGAACAAAATCTGATGAACAACTTCAACACCATCGGCTCGGACGCGATGTCGAACGAATCCAACTCGCCGCCCGCTTGGCAGCAGTCCAACGAGGACGAGGCGGCCCAGTACAACATGAGCCCCGCTCATTCCGCGGTGTCCAAACATTCGAACAGTGATTGCGAGATGGCTGAGGATCTGTCGGTTAAGAAATCTCCAACGCCAAAGATCAAGCAGGAGATCATCACGGAAAATTGCGACTAA
- Protein Sequence
- MSDEPHQYNLRWRNHRKNFFDELENLFKTDLLTDINLILEGGRVVPCHKMVLATTSLAFRDFLLKNPEALDMIIPGVTYDQMRTLLEYMYSGQAQIMYSELSSLLKVAEQLKIKGLTTDAETDGSNSPSSSVQEGAAAAPEESAGSPPPTISTSTNDRADNKPAESSSASPPPSAHSTGNIYDYYKYSSAYNMPAFPSLTPFPIPQYAAAMAAAAASEYYGSLHKFKDTPILRNVLHQNNHDESMDHAESIHDEKTRESAASMVSSVYDEDKYPDIKPKNFYKVKKEFMERVQQQQQSQQCESTENTSTPPKSGKQKVDWKRYKQYSPDDLNRAISTVIDGKMSALQASKDFGVPSRTLYDKIKRLKSQKEQGGSPQSPDVGNNRSYRNKSQNYGMIKRFYSMLTPENLRAINEQNLMNNFNTIGSDAMSNESNSPPAWQQSNEDEAAQYNMSPAHSAVSKHSNSDCEMAEDLSVKKSPTPKIKQEIITENCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01493723; iTF_01492797; iTF_01493012;
- 90% Identity
- iTF_01493723; iTF_01492797; iTF_01493012;
- 80% Identity
- iTF_01493723;