Tbro007419.1
Basic Information
- Insect
- Trissolcus brochymenae
- Gene Symbol
- ttk
- Assembly
- GCA_030523145.1
- Location
- JAQQRF010000289.1:45295-47111[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-12 2.8e-09 37.0 0.0 1 43 330 373 330 375 0.93
Sequence Information
- Coding Sequence
- ATGTCTGACGAGCCGCATCAGTATAACTTGAGGTGGCGGAACCATCGCAAGAACTTTTTCGACGAATTAGAAAATCTGTTCAAGACCGATCTCCTGACGGACATCAATCTGATCTTGGAGGGCGGCCGAGTGGTACCCTGTCACAAGATGGTTCTTGCAACCACCTCCCTAGCCTTCAGAGACTTCCTTCTGAAGAACCCGGAAGCCCTGGACATGATAATCCCCGGGGTCACGTATGACCAGATGAGAACCCTCCTGGAATACATGTACAGCGGCCAGGCGCAGATCATGTACTCCGAGTTGAGCAGCCTTTTGAAGGTTGCGGAGCAGCTCAAAATCAAAGGCTTGACGACAGACTCCGAGACCGACGGCTCAAACTCGCCCTCAAGCAGCGTTCAGGAGGGCTCAGCAGCCGTGCCGGAGGGATCGAGCGGCTCGCCTCCTCCCACAATCGGCACTAGCACCAACGATCGCACGGACAACAAGCCGACGGAGAGCGGCTCGGCCTCGCCCCCTCCGCCCGCACACACCACCGGAAACATCTACGATTACTATAAGTACTCGTCGGCGTATAACATGCCGGCGTTCCCCAGCCTCACGCCTTTCCCCATCCCACAATACGCCGCCGCCATGGCGGCGGCCGCTGCCAGTGAGTACTACGGCAGCATCGGCCTCCACAAGTTCAAGGACACGCCGATTCTCAGAAACGTATTGCACCAAAATAGCCACGAGGAAGCCATGGACCAGACCGAGTCGATCCACGATGACAAGACCCACGAGTCGGCGGCCTCCTTGGTCAGCAGTGTTTATGACGAGGATAAAAGCAACGACGTTAAACCTAAAAACTTTTACAAGGTCAAGAAGGAGTTCATGGAGCGGgtgcagcagcaacagcaaaATCAGCAGTGCGAGTCCACGGAAAACAGCTCCTCAACTCCGCATAAATCAGGAAAACAGAAGGTTGACTGGAAGAGGTACAAGCAATACTCGCCGGACGATCTCAACCGGGCGATCACCTCCGTCATCGACGGCGAGATGAGCGCTCTAAAGGCGTCACAGGTGTTCAGCGTGCCCTCGCGCACTTTGTACGACAAGATCAAACGACTGAAAAGCCAGAAGGAGCAGAGTGGCAGCCCACAGAGTCCCGACGTGAGCAACAACAGGAACTACCGGAACAAATCACAGAATTACGGGATGATCAAGCGATTCTACAGCATGCTGACGCCAGAGAACTTACGGATGATCAACGAACAGAACCTGATGAGCAGCTTCAACACCATCGGCTCGGACGCGATGTCGAACGAATCAAACTCGCCGCCCGCTTGGCAGCAGTCCAACGAAGACGAGGCTGCCCGCTACAACATGAGCCCCGCTCATTCCGCGGTGTCCAAACATTCGAACAGTGATTGCGAGATGGCCGAGGATTTGTCGGTTAAGAAATCTCCGAACACATCAAAGATCAAGCAGGAGATCATCACGGAAAATTGCGATTAA
- Protein Sequence
- MSDEPHQYNLRWRNHRKNFFDELENLFKTDLLTDINLILEGGRVVPCHKMVLATTSLAFRDFLLKNPEALDMIIPGVTYDQMRTLLEYMYSGQAQIMYSELSSLLKVAEQLKIKGLTTDSETDGSNSPSSSVQEGSAAVPEGSSGSPPPTIGTSTNDRTDNKPTESGSASPPPPAHTTGNIYDYYKYSSAYNMPAFPSLTPFPIPQYAAAMAAAAASEYYGSIGLHKFKDTPILRNVLHQNSHEEAMDQTESIHDDKTHESAASLVSSVYDEDKSNDVKPKNFYKVKKEFMERVQQQQQNQQCESTENSSSTPHKSGKQKVDWKRYKQYSPDDLNRAITSVIDGEMSALKASQVFSVPSRTLYDKIKRLKSQKEQSGSPQSPDVSNNRNYRNKSQNYGMIKRFYSMLTPENLRMINEQNLMSSFNTIGSDAMSNESNSPPAWQQSNEDEAARYNMSPAHSAVSKHSNSDCEMAEDLSVKKSPNTSKIKQEIITENCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01493500;
- 90% Identity
- iTF_01493500;
- 80% Identity
- iTF_01493012;