Basic Information

Insect: Trissolcus brochymenae
Gene Symbol: salm
Assembly: GCA_030523145.1
Location: JAQQRF010000342.1:260344-270434[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.8e-06 0.00054 20.8 0.9 1 23 387 409 387 409 0.98

2 9 9.6e-06 0.0011 19.8 2.1 1 23 415 437 415 437 0.98

3 9 0.06 6.7 7.9 3.8 2 23 819 840 818 840 0.98

4 9 4.2e-08 4.6e-06 27.3 0.6 1 23 846 868 846 868 0.97

5 9 2.2e-05 0.0024 18.7 2.3 1 23 878 900 878 900 0.98

6 9 0.002 0.22 12.5 1.9 2 23 1196 1217 1195 1217 0.97

7 9 0.14 15 6.7 2.3 1 17 1223 1239 1223 1240 0.90

8 9 9.8e-07 0.00011 23.0 2.1 3 23 1415 1435 1413 1435 0.96

9 9 7.5e-07 8.3e-05 23.3 2.2 1 23 1441 1463 1441 1463 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.8e-06	0.00054	20.8	0.9	1	23	387	409	387	409	0.98
2	9	9.6e-06	0.0011	19.8	2.1	1	23	415	437	415	437	0.98
3	9	0.06	6.7	7.9	3.8	2	23	819	840	818	840	0.98
4	9	4.2e-08	4.6e-06	27.3	0.6	1	23	846	868	846	868	0.97
5	9	2.2e-05	0.0024	18.7	2.3	1	23	878	900	878	900	0.98
6	9	0.002	0.22	12.5	1.9	2	23	1196	1217	1195	1217	0.97
7	9	0.14	15	6.7	2.3	1	17	1223	1239	1223	1240	0.90
8	9	9.8e-07	0.00011	23.0	2.1	3	23	1415	1435	1413	1435	0.96
9	9	7.5e-07	8.3e-05	23.3	2.2	1	23	1441	1463	1441	1463	0.98

Sequence Information

Coding Sequence: ATGGAGCTTATGAGATGGAGCATCACCAAACCGCTGCAAAGCCGAGGCATCGGCGGCCGACCTATCAAACCCGCGCCTACCTCCAGGCCGCTCGACCTGCGAACTTCTCTCTCCGgagAAGAAAATGATTCAGCCTCAGACGGGGAGGAGAGCGGAGGGGCGCCGGGCGGTGACGAGGCGGTGGATCTCACCGCGTCGCGTTCGCAGCCCGACGAGGAGGACGAGTTGCCCGTGGAAGACGAGGAGGAGGACGGCATGGACGAGCCGGAAGAGCAGGACGACGAGGACGAGGAAGGCTCGCGCAAACGGATGCGTCATCGACAGGACGCGGAAAACAACAACAGCTTCGCGGAGGGCGCGCCCGTGCCGGGACTGTTTCCCTCCGCCGGTACTAGTCACGTGACACTGGAGGCACTACAGAACACGAACGTAGCGGTTGCGCAGTTCGCACCTGCGGCGCTCGCGGCGAACCCAGAGAACGAGGCTGTGCTGCAGGAGCTGGCGATACTCTACACGATCCATCAGCAGCACCAAGTATTACAACTCCAAATAATCAATCAGATCCAACAGAAGCTATCGATCAATCAGCAGGGCCAGTCGGGACAAACGACCACGACGACGTCGACGACAACGACATCGGCAACGGGGGAGACGGCGTCGGCGGCCAATGAGAACAAGGAACAGTCGCCCTCGCCGAGCCTGCTCTCCAAACCGGTATCACTGACGTCACCGCCCCCATCCCTGTCCCGTTCTCCGATTCTGCAGCAACAGTCGTCGCCGATAGCGCTGACGCCTGGCGAGAGGCCCGCGCCGTCGGCAAGCGCGTCGCCCCTGAGTGTGCCTGTGACGACCCCGGCGACGACGGGGAGCACCATCGCGAACAGTCAGGTCGCGCTTTCTCACCAGATGCCGCCTCTTTGTTCGATCAGTTCGTCGTTGGCGTCGTCGATTATCACGAATAACGACCCGCTGCCGCTGCACGAGCCAAATACCCTCGAGGTGTTACAGAAGAGGGCTCAAGAGGTGCTGGACAATGCGAGTCAGGGCCTGCTGGCGAACAACCTGGCGGACGAGCTCGCGTTCAGAGGTGGTAAAGGCTCGCGGCTGTCTCCGTACGACTCGAAATCGGGCGGCGGCCGAGGCGAGCCGTTCTTCAAGCACCGCTGTCGCTACTGCGGCAAAGTGTTTGGCAGCGACTCGGCACTCCAGATCCACATACGGTCACACACAGGTGAGCGTCCCTTTAAGTGCAACGTCTGTGGAAGCCGATTCACCACCAAGGGGAACCTCAAGGTTCACTTTCAGAGGCACACGGCCAAGTTTCCGCACGTAAAGATGAATCCGAATCCCGTCCCCGAACACCTTGACAAATTTCATCCTCCCCTCCTTCAACAGCTCGCGGCGTCCGGTCAGCGACCTCTTCCATCGCCGCCGCCCCCGCCGCCGCCGTCACATGCCCAGTTTCATTCAACGCCCAATCGTGGTTTTATTCcccaacaacaacaacaacaacaacaacaaccaccaccaccaccaccacccaTACCATTGAATCTTGCCTTACCCGGTATGCCGCCCCTTTACCGATCTCCAGTCGTCAGTCAACGAGACGATCAAGACTTACCAGAGAACCTTAGCAAGCCTGTAGCACCGACACCAACTACATCTCCGAACTCGCCCAATGCCCAATTAAATTCTCATAATCCCTTTCATGATAATCTTCAAGGTTCGCAGCCGCcacagcagcaacagcaacagcaacagcaacaacagccGAAAACGAAGGACGATATCAAAGTTGAACGGCGATCACCGGTCGATGAACAATATCAGTCGAGGCCGATCTGCCAAGAGAATAACGAGCGAATAACGCCCAAGCGCGAACCCGAGGACGCGGAAGATGCGACCGAGGACGAGAGCAAAGAGTACGACGACACGCACCGACGATACTCGTCGCCTCTCTCGGTGAATCCCTCGTGTCAGCCGCAAGCTTACGAGGACTGCAGCATGGACAGCAAAATGAGCGCTAGACTCGAGGGCGACGTCGATATGGACGGCGAGGTCGAGATGGACGAGCAACCCGAAAATCTATCCAGCAGACCGTCGTCCAACCGTCTTCCAACGCAACTGCTCGGCTACCCTGGAGCCTCCCCGGCGAGCAGCACCGCGAGCAGTAGCAGTTTGCACACGTCGTTCGCGGGCATTTTGTACCCCGGTCCCCCGCCTCATCACCAATTACCTCATCACCCCTCCTCCACGTCCGTCTCCACGTCTACAGGCATCAACGAGATGATCGATCCCGCGAAAGATCCCGCCATCTATTCGAGCCTATTGCCGAGGCCTGGCAGCACCGACAACTCCTGGGAGAGTCTCATCGAGATCACAAAGACCTCGGAGACGTCCAAGTTGCAGCAGCTTGTAGATAACATTGAACATAAGCTAACCGATCCGAATCAGTGTGTGATATGCCACAGAGTTCTATCGTGCAAGAGCGCGTTGCAGATGCACTACCGAACGCACACGGGCGAGCGACCGTTCAAGTGTAAAATTTGCGGCCGAGCTTTCACGACGAAGGGCAACCTGAAGACGCACATGGGTGTACACAGGGCGAAGCCACCACTTCGGGTGCTGCATCAGTGCCCGGTCTGCCATAAAAAGTTCACGAACGCGATCGTCCTACAGCAACACATACGACTGCACACGGGCGAACCCACTGATCTCAGCCCCGAACAAATCCAAGCCGCCGAGGTGAACGAGTTCCCGCCGGGCTATCCTCACCATCTTGCGCCCTTCTTACCCCAGGGATTCCCTCCTATGCACCCTGCAGGGGCGGCGGGCTTCTCCCTCAACTTTCAACCCCGACCACCGACAATTGGAAGGCCCCCGCCCCAAGACCACGAGATGGACACCCAAGACTCCCAACCGACGCAGTCAAACGACCAACAGTCTTACATGGACGAGCATTGCGAGGACCAAGAAGAGGACCAAGAGGACGAGGAGAAGGACAGCAGAGAAGAGGACGAGAGGTGCGAGACGGCCAACGACAGGCGAAGCATCCTCGACGAGGACGAGGAGAAGGAGCACGAAGAGGAGATTGAGGGATGCAAAGACACCCCTGTGCCGTCCTTCTCGACTTCCTTGGCTGCGCTTGAGAACCAGGTCAGAACCATCACGACCATGGCGACGAGTCTGGCAAGCATAGAAAGGTCCCCGCCGCTGCACAGATTCAACGGCAGCGAAAAGAGCAACAGTCCTCCCAGCAACGGCACGCCCCTGGACCTCACGCCCCGGGCCTCATCCACACCGGCTTCTGCGGCCTCGACCCCAACGCCACCGCCTTCAAGTGCCCCGACGACCACCCATCACCCGCACCCGTTCGGCATGTTCGCCGGTCTCCTACAGGCCGCGTCGTCGTCCCCGTCATCAAACAACCTCAATAGCGTCGGCTCGATAAACGCAGTGACTCCTGCCGGCAGTGGCGCTGGACCTCTCGCCTCTCTAACGACATCGGCGGTGCTCGCAGCCACATCAACCTATAACCCACTCGGTCTGGCTGTTGGAGGGCCAGCAGCACGTGGCAACACTACTTGCAATATCTGCTACAAGACGTTCGCATGCAATTCAGCGTTAGAGATTCATTACCGTAGTCATACAAAGGAACGACCTTTCAAGTGTACCGTCTGCGAAAGAGGCTTTTCGACAAAGACCGAAATGTGCAAATGTTCGTTACAAAGAAACGGAAAAACCGACTCTGCAAATACAACCCAAACGAGCGCAGCGGACAAGCCCAAGCGCAGGCGACGGCGGCCTGAGGATGCTAAAAGTCGGGGGCGGACAAGGCCCGATGGCGAGCGGGCACTGACGTCTGCTCACGCAGCCGTCTTTGGGGAGACTCGCCTGCCCCCGCTGATGCCATCCGCCCTCGGTCTTCTAGCCTCGGACCCCGTTTTCCTGGGGAATATGAAGCAACACATGTTGACGCATAAGATACGAGACATGCCAGCCCATCTGTTCAGCGAGCCGAAACAGCCAAGTCCGAGTTCTCAGACAGTGCAGCAGGACAGGGAGTCGTCGTCGAGTCCCCTTCGCAACGACGAACCCAACAGTCTTCCGCCTCCACCTCCACCGCCACCGCCACCTCCCCCACCGATGCCGCCTGTAGAGTCTACGGTGAAGCGAACGACCCCCGAGGGCGAGCTACCGGCGCCTAAAAGACCTTGCAGCATGTCCAGCAAACACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCATCCTCGGCGCTGCAGATCCACATGAGAACGCACACCGGAGACAAACCCTTCAAGTGCGACATCTGCCATAAGGCCTTCACAACAAAGGGCAATCTCAAGGTACACACGGGAACGCATATGTGGACAAACGGAACATCACGACGAGGTCGACGAATGTCGTTGGATCTGCCGCCTCTGCCCATCACCCCCAAGGACTCGGAATTTCTGCAACGACGACCGGACCTCTTCTATCCATATCTTCACCCGCCATTCCTTAATGGTGTTCAGCCAAAACTTAACGAGATCTCGGTGATACAAAACAGCAATGGTTTGCCAGCGCACTCGACGGGCGTGAGCAAATACGCCGGACTGTTTAGCTCGGTGTACGGAAGCGCGGGCTTCTCGCTGGACAAACAGCCGATGTCGCCCGGAAATGGGCCCTTGGGCGAGACCAAATCAGCGTTCCCTCCGGGATCGATGCTGTTCCAGTCGCCGTCGCCGGCCCACTCGTCCGGCACAGCTTCGTCCAACGTCAACAGTCAGAACTCGCCCAGCCTACCTGCCTGGAGCACCGAGTCGCTGCAGCACCACCACTTCGAGAGGGATGCACCGCCACGACCCGAGAGCGACCCGACGCCACCCTCGGCACACCTGGCGCCTCCACCCACGCCCCGAGGCGAGGGCCTGGCTGCGTGA
Protein Sequence: MELMRWSITKPLQSRGIGGRPIKPAPTSRPLDLRTSLSGEENDSASDGEESGGAPGGDEAVDLTASRSQPDEEDELPVEDEEEDGMDEPEEQDDEDEEGSRKRMRHRQDAENNNSFAEGAPVPGLFPSAGTSHVTLEALQNTNVAVAQFAPAALAANPENEAVLQELAILYTIHQQHQVLQLQIINQIQQKLSINQQGQSGQTTTTTSTTTTSATGETASAANENKEQSPSPSLLSKPVSLTSPPPSLSRSPILQQQSSPIALTPGERPAPSASASPLSVPVTTPATTGSTIANSQVALSHQMPPLCSISSSLASSIITNNDPLPLHEPNTLEVLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKFHPPLLQQLAASGQRPLPSPPPPPPPSHAQFHSTPNRGFIPQQQQQQQQQPPPPPPPIPLNLALPGMPPLYRSPVVSQRDDQDLPENLSKPVAPTPTTSPNSPNAQLNSHNPFHDNLQGSQPPQQQQQQQQQQQPKTKDDIKVERRSPVDEQYQSRPICQENNERITPKREPEDAEDATEDESKEYDDTHRRYSSPLSVNPSCQPQAYEDCSMDSKMSARLEGDVDMDGEVEMDEQPENLSSRPSSNRLPTQLLGYPGASPASSTASSSSLHTSFAGILYPGPPPHHQLPHHPSSTSVSTSTGINEMIDPAKDPAIYSSLLPRPGSTDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNAIVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYPHHLAPFLPQGFPPMHPAGAAGFSLNFQPRPPTIGRPPPQDHEMDTQDSQPTQSNDQQSYMDEHCEDQEEDQEDEEKDSREEDERCETANDRRSILDEDEEKEHEEEIEGCKDTPVPSFSTSLAALENQVRTITTMATSLASIERSPPLHRFNGSEKSNSPPSNGTPLDLTPRASSTPASAASTPTPPPSSAPTTTHHPHPFGMFAGLLQAASSSPSSNNLNSVGSINAVTPAGSGAGPLASLTTSAVLAATSTYNPLGLAVGGPAARGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTVCERGFSTKTEMCKCSLQRNGKTDSANTTQTSAADKPKRRRRRPEDAKSRGRTRPDGERALTSAHAAVFGETRLPPLMPSALGLLASDPVFLGNMKQHMLTHKIRDMPAHLFSEPKQPSPSSQTVQQDRESSSSPLRNDEPNSLPPPPPPPPPPPPPMPPVESTVKRTTPEGELPAPKRPCSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFKCDICHKAFTTKGNLKVHTGTHMWTNGTSRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLHPPFLNGVQPKLNEISVIQNSNGLPAHSTGVSKYAGLFSSVYGSAGFSLDKQPMSPGNGPLGETKSAFPPGSMLFQSPSPAHSSGTASSNVNSQNSPSLPAWSTESLQHHHFERDAPPRPESDPTPPSAHLAPPPTPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01493785;
90% Identity: iTF_01493785;
80% Identity: -