Tbro003847.1
Basic Information
- Insect
- Trissolcus brochymenae
- Gene Symbol
- bab1
- Assembly
- GCA_030523145.1
- Location
- JAQQRF010000116.1:75619-81916[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.5e-14 54.0 0.0 1 43 28 71 28 73 0.95 2 2 1 1.2e+03 -0.2 0.3 6 15 150 159 145 162 0.86
Sequence Information
- Coding Sequence
- ATGTggcaaaaatgttggaatacCAATCAAAGTTTGGTCCACAATCTTCGTTTTCGAGAACGCGGGCCACTTAAGTCCTGGCGACCGGAAACGATGGCAGAAGCGATATTCAGCGTTTTGAAGGAAGGACTCTCTCTAAGTCAAGCAGCAAGAAAATATGATATCCCTTATCCCACATTCGTCCTATACGCAAACCGAGTGCACAACATGCTTGGGCCCAGTGCAGATGGCGGAGCAGACTTGCGTCCGAAGGGGAGAGGACGGCCGCAGAGGATTCTCCTGGGTGTCTGGCCAGACGATCACATCCGCGGAGTAATTCGGGCGGTGGTGTTTCGCGATGGTCACTCGCCCCACATAGTCAAGGAAGAACAAACCACGATGTACCCGGCACTGGCAAATTACGCTAGCTGCAACGGGCCCGAGGGTGCGGTCAGTCCCTCAGCAGCTGCAGCTGCGGTCGCCGCAGTCGCGCAAGGTTTACGGCATCAAATGTGCAGCATGGTTGCAGCTGCCCACTCGCAACAACACGACATGCTGGCAACGAATCTCTCGACGAACCTGTCGACGAATCTCCAAGCAGCGATGCAGGCAAGTCAACACCACAATAACAGTGGTGGTGCTAACATCCCCGGTCTAGGAGCCGCCggaaacaataacaacaacggTAACTCGCCACTGAACCTTGGTCTAGCCAGTCCGAGTTCAGGAGGTCCACCAGAGAGTCCAATGGAGAGTCCTTTGGCGAGTCCCTTGGGGCCACTGATGGACCCAACACACATACCCAGCAGTGTAGAAGTCGGCATTGGCGTCAGCGGCATGACCTACAAACCTGCGCGCAGTTTCGTCAGCCCTCGCCCAGAAACGCTCTTCCAAGAAGACATCGCGGACCTTGTGAAAAGCCCGCATAGTCTGGTTAAAGATAAAGACAAAATTGCGGTGAAGTTGGAGCCTCTAACAGACTCACGATGTGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRDGHSPHIVKEEQTTMYPALANYASCNGPEGAVSPSAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMLATNLSTNLSTNLQAAMQASQHHNNSGGANIPGLGAAGNNNNNGNSPLNLGLASPSSGGPPESPMESPLASPLGPLMDPTHIPSSVEVGIGVSGMTYKPARSFVSPRPETLFQEDIADLVKSPHSLVKDKDKIAVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00227880;
- 90% Identity
- iTF_01392685;
- 80% Identity
- iTF_01493496;