Temo006790.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352741.1:9619857-9621962[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-06 0.00028 21.0 0.0 2 41 24 64 23 66 0.91
Sequence Information
- Coding Sequence
- atgcctccaaaacgtgtcaaacaaagaaaCAGAAGACGATTGGGCGCTCGTAATTACAAAAATTATTCAGAAGAGATGCTGTTATTGGCTGTAGATTTAGTCAGAAACAAAAATACAACTTCTTACGAAGCTGAGAAGCAGTTTGGAATTCCCCGACGGACCATAGAAAAAAGAGTGAAAAACCTGCATACTGATAAACCTGGCCCGCGTTTCCGTCTATCTAAAGAAGAAGAAGAAAAGTTTGTTAAAGTACTTATAGCAGCAGGTGACTTTGGATGTCCGTTATCACAGTTGGACTTAAAACTGGCGGTTTATGACTACCTTAAAAAAAATAACAAGACTTACATATTCAATGACCAAGTTCCTGGTGATTGGTGGGTAAGACATTTTTTAGAGCGGCACAAAGACCAACTAACCCTCAGGTCTACTCAAAATATTACGAAAGCGCGAGCAGAAAGAACGTTGGATGAATTCAAAGAATATTTTGGAAATCTGGAGATTTCTCTTCAAAATCTACCCCCTAAAAATATAATGAATTACGACGAGACCAACGTTTCTGACGACCCAGGCTCCACAAAATGTATTTTTCGCCGAGGAGTAAAGTACCCTGAGAGAATCATTAATCACTCAAAAGGCTGTATATCAATTATGTTTGCGGGGACTGCTGACGGTGACCTTCTACCGCCATACATTGTTTATAAATCGGAAAATTTGTGGACTGAGTGGTGTAAAGATGGGCCAGAAGGGGCACGCTACAATCGCTCTAAGAGCGGTTGGTTTGATTCCGTTGTCTTTTTGGACTGGTTTATAAATATTGTTGTTCCTTGGGCCAAACAATTAGAAGGGCCGAAAATAGTTATAGGTGACAACTTATCCAGCCATTTAAATCCCGATGTGGTTGAATTGTGTGAGGCTCACCAAATACGTTTCATATTTTTGCCTCCTAGGTCTACACACTTAACGCAGCCTCTGGACGTTGCTTTTTTCGGGCCTCTGAAAAAGGAATGGAGGAAAATTCTTCTCCGATATAAAACGGAAAATCCTAAACAGGCATCGTTAAACAAAACCCATTTCCCTCTTCTACTGAAGCAATTGATGGATGCAGCAAACATAAAAAAACAAAATATGCTGAGTGGTTTTAAAGCTACTGGCATATACCCTTTTAATCCTTATGAAGTATATAAAAAACTGCCCGATTACGAAGATGATATCAGATATGACGTTGACCAAACACTGCTTGATTATCTTAAAGAAAATAAACATCCTAATCCAATAAAACGAGGGAAAAACACTAAGTTAAATGTGCCATCAGGTAAATCAGTCAGCAGCGCCGACATCTCATGTTTGTCGATAAATAAGAAATCTACCACAAAACCAAAGACTACTACCAAAGAGAAAACGGTTGTAAAAAAAACACTTAAAAATAATGACCAAAAACAAAAACTAATTAAAAGAAAAAAACGTCGTTTTGAGACTTCTACCGATTCAGAATCAAGTTGTTCAATACCTTGTAGCGATTCATCAGAATATAACCCCGAAAATGATGAAGACACAGAAATAGAACATGGCATAAATGAAAGCATAACGGTTGATAAGGACTGTGAGGAGAATATTGAAGACGTGAATGAAGGCAATGAAGAAATTGCGGATTGCATAAAACCAGAGGAAGATACAAAAATACAAAACGTAAAAGAAAAGAAAGATGAAGTTCTTGGAAGTCAGGAAACAGATATGGAAGTTACGGATGATTTAGATAGTAGTAAACAGAGTCCTAAATGCCAAAAAATTGTGACAGTTTTATCGGATATAAGAAATACAGCTGAAAATCTTGCATATTTCAATTTGCGCAAATACGGTCCACTTGTACTTGAAGAAATAAAAACCGATCATATTGTGAATGTGAAGTGTAGAGCAAAAAACAAAAATATAGACAGTTACAAAATAAATAAAAAAACAATTAAATCTGAGCATGCAGTCTTGATTAAAACTGGATCAACTGGTATGAATAAACTGACGTCTTCTAATATGACTTCTGACACAAATCGGAGTGCAAGTTGTAGTAAGGAACCCAAGCAAAAAATTATTCTGCGATTACTTACAATGTGA
- Protein Sequence
- MPPKRVKQRNRRRLGARNYKNYSEEMLLLAVDLVRNKNTTSYEAEKQFGIPRRTIEKRVKNLHTDKPGPRFRLSKEEEEKFVKVLIAAGDFGCPLSQLDLKLAVYDYLKKNNKTYIFNDQVPGDWWVRHFLERHKDQLTLRSTQNITKARAERTLDEFKEYFGNLEISLQNLPPKNIMNYDETNVSDDPGSTKCIFRRGVKYPERIINHSKGCISIMFAGTADGDLLPPYIVYKSENLWTEWCKDGPEGARYNRSKSGWFDSVVFLDWFINIVVPWAKQLEGPKIVIGDNLSSHLNPDVVELCEAHQIRFIFLPPRSTHLTQPLDVAFFGPLKKEWRKILLRYKTENPKQASLNKTHFPLLLKQLMDAANIKKQNMLSGFKATGIYPFNPYEVYKKLPDYEDDIRYDVDQTLLDYLKENKHPNPIKRGKNTKLNVPSGKSVSSADISCLSINKKSTTKPKTTTKEKTVVKKTLKNNDQKQKLIKRKKRRFETSTDSESSCSIPCSDSSEYNPENDEDTEIEHGINESITVDKDCEENIEDVNEGNEEIADCIKPEEDTKIQNVKEKKDEVLGSQETDMEVTDDLDSSKQSPKCQKIVTVLSDIRNTAENLAYFNLRKYGPLVLEEIKTDHIVNVKCRAKNKNIDSYKINKKTIKSEHAVLIKTGSTGMNKLTSSNMTSDTNRSASCSKEPKQKIILRLLTM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00186125;
- 90% Identity
- iTF_01491883;
- 80% Identity
- -