Temo008119.3
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- -
- Assembly
- GCA_947095525.1
- Location
- OX352742.1:18415020-18424947[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.4e-12 1.9e-09 37.5 0.0 4 39 173 209 170 213 0.89 2 4 1.2e-10 3.2e-08 33.6 0.3 2 39 225 262 224 266 0.92 3 4 9.9e-15 2.6e-12 46.7 0.1 2 45 280 324 279 324 0.96 4 4 1.1e-17 3e-15 56.1 0.0 1 43 331 374 331 375 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGTCTATCTCAAGTGAAATGCGAGCCACCCTCCGATGAAGACGATAGTAATTCACAGTTCGCGCACAGTTATCTGTCTAATCAGCTAACATCGCCAGTCCTTCCAGTAAAGTTAGAATCTCCGCGGAAGTGTGATGAGAGTGTACCAACGGATTTACTCCGAGACTTGCAGGGTGGGTTGGAGGAGTTGGCACCGCTGGCGCCGGCGGGCCCGGCAGCTACTCCAGTGTGTGTCAAGCAGGAGCGTGTCTCACCACCAGCTGCCACCCTAGAGACCCTGGAGTCAGCCCCGCATCATGCCAAGAGCACGTCACTGCTGGGGCGTCACATGTCGATACTGAACGAAGTGCCTGACTCCACGGACTTCATGCCGCTCTTATCTGTTAAGGATGAACCTTCTTCTGAAGGTGAACAAGCCCATCTTAGCAGCGATGACACAAGTGATTCATGCGGTCGTCAAGCCTCACCTGCACCACGAAATAGTCCTAAGAGCTGGACGCAACAAGATATGGAACGAGCGCTGGACGCACTCAGGAATCACCAGATGAGCCTTACCAAGGCATCAGCTACTTACGGCATTCCGTCCACAACACTCTGGCAGCGAGCCCATAGACTGGGCATCGACACGCCGAAAAAGGAGGGCTCCGCCAAGTCATGGAGCGAGGCAGACTTGCGTGGGGCACTACATGCTTTGAGAGCGGGCGCTATTTCAGCTAATAAAGCTAGCAAGGCTTATGGCATCCCCAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGTCTGTCGGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCCGACCTGCAGCTCGCGCTCGCCGCCATCCGCGCCGGCGCCAGCTCCGTGCAGCGCGCCGCCACCACCTACGGGATACCCACTGGCACTCTATACGGCCGTTGCAAGCGCGAAGGTATCGAGCTGTCCCGATCCAACCCCACACCCTGGTCTGAAGACGCCATGGGAGAGGCTCTCGAAGCTGTCAGAGTGGGACAGATGTCGATAAACCAAGCAGCGATACACTTCAACCTGCCTTACTCCTCACTGTACGGCAGGTTCAAGAGGTGCAAGTATCAGGCGCAGGGTGTCCCTCAGAACCAGCAGCAAACTCAAGAACTTCACAAGCCCGAGCTGGACCCCCAGCCGCTCGAGGTGCACCAATACTACAGCCACGTGGCTACCACCCAGGACCACGACATGCTCACGTACTCACACATGAGTGAGTACCACCACGACACACACATGCACGACCAATACGGCCAGTACTACCAAACGTTCAACAGTATAGCAACCAGCTGA
- Protein Sequence
- MPGYGLSQVKCEPPSDEDDSNSQFAHSYLSNQLTSPVLPVKLESPRKCDESVPTDLLRDLQGGLEELAPLAPAGPAATPVCVKQERVSPPAATLETLESAPHHAKSTSLLGRHMSILNEVPDSTDFMPLLSVKDEPSSEGEQAHLSSDDTSDSCGRQASPAPRNSPKSWTQQDMERALDALRNHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQLALAAIRAGASSVQRAATTYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQAQGVPQNQQQTQELHKPELDPQPLEVHQYYSHVATTQDHDMLTYSHMSEYHHDTHMHDQYGQYYQTFNSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00931136;
- 90% Identity
- -
- 80% Identity
- -